Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 NDRG1-225ENST00000522890 581 ntTSL 519.78■□□□□ 0.762e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.55■□□□□ 0.722e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-211ENST00000519228 729 ntTSL 418.31■□□□□ 0.522e-7■■□□□ 11.5
XRN2Q9H0D6 TUBGCP6-208ENST00000498611 5274 ntTSL 1 (best)17.83■□□□□ 0.442e-7■■□□□ 11.5
XRN2Q9H0D6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.443e-6■■□□□ 11.5
XRN2Q9H0D6 NDRG1-210ENST00000518480 558 ntTSL 417.43■□□□□ 0.382e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-205ENST00000517745 391 ntTSL 317.4■□□□□ 0.382e-7■■□□□ 11.5
XRN2Q9H0D6 SLC26A11-210ENST00000572226 623 ntTSL 317.33■□□□□ 0.362e-7■■□□□ 11.5
XRN2Q9H0D6 MGRN1-210ENST00000588111 561 ntTSL 316.99■□□□□ 0.312e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-210ENST00000464241 1562 ntTSL 1 (best)16.85■□□□□ 0.292e-7■■□□□ 11.5
XRN2Q9H0D6 PET100-204ENST00000600836 474 ntTSL 316.85■□□□□ 0.292e-7■■□□□ 11.5
XRN2Q9H0D6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.84■□□□□ 0.292e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-214ENST00000520230 582 ntTSL 416.23■□□□□ 0.192e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.142e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-213ENST00000519580 550 ntTSL 515.85■□□□□ 0.132e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-219ENST00000521544 709 ntTSL 515.85■□□□□ 0.132e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-206ENST00000518010 581 ntTSL 415.05■□□□□ -02e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.092e-7■■□□□ 11.5
XRN2Q9H0D6 MGRN1-216ENST00000592256 590 ntTSL 514.42□□□□□ -0.12e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.142e-7■■□□□ 11.5
XRN2Q9H0D6 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.99□□□□□ -0.172e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-224ENST00000522738 530 ntTSL 513.99□□□□□ -0.172e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-206ENST00000449459 2161 ntTSL 213.85□□□□□ -0.192e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.232e-7■■□□□ 11.5
XRN2Q9H0D6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.282e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-210ENST00000489769 1562 ntTSL 1 (best)13.04□□□□□ -0.322e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.332e-7■■□□□ 11.5
XRN2Q9H0D6 MTUS1-225ENST00000523718 3354 ntTSL 1 (best)12.98□□□□□ -0.332e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-215ENST00000520943 536 ntTSL 412.22□□□□□ -0.452e-7■■□□□ 11.5
XRN2Q9H0D6 TUBGCP6-207ENST00000491449 4044 ntTSL 512.05□□□□□ -0.482e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-204ENST00000424122 2806 ntTSL 1 (best)10.62□□□□□ -0.712e-7■■□□□ 11.5
XRN2Q9H0D6 PET100-201ENST00000456958 219 ntTSL 2 BASIC10.55□□□□□ -0.722e-7■■□□□ 11.5
XRN2Q9H0D6 NDRG1-208ENST00000518094 347 ntTSL 210.41□□□□□ -0.742e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-201ENST00000233623 3235 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.782e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-213ENST00000491252 3860 ntTSL 29.96□□□□□ -0.822e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC9.59□□□□□ -0.872e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.892e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.92e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.92e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-212ENST00000489152 4025 ntTSL 29.27□□□□□ -0.932e-7■■□□□ 11.5
XRN2Q9H0D6 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.012e-7■■□□□ 11.5
XRN2Q9H0D6 MBNL2-206ENST00000469707 2574 ntTSL 1 (best)7.38□□□□□ -1.232e-7■■□□□ 11.5
XRN2Q9H0D6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.23□□□□□ -1.252e-7■■□□□ 11.5
XRN2Q9H0D6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.44□□□□□ -1.382e-7■■□□□ 11.5
XRN2Q9H0D6 PET100-203ENST00000598540 375 ntTSL 36.33□□□□□ -1.42e-7■■□□□ 11.5
XRN2Q9H0D6 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.42e-7■■□□□ 11.5
XRN2Q9H0D6 NCL-210ENST00000494618 910 ntTSL 25.68□□□□□ -1.52e-7■■□□□ 11.5
XRN2Q9H0D6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.65□□□□□ -1.52e-7■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.683e-6■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.483e-6■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-207ENST00000467177 1221 ntTSL 1 (best)17.37■□□□□ 0.373e-6■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.133e-6■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-212ENST00000497691 2555 ntTSL 1 (best)15.31■□□□□ 0.043e-6■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-209ENST00000485307 1574 ntTSL 1 (best)14.61□□□□□ -0.073e-6■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-211ENST00000496753 561 ntTSL 414.42□□□□□ -0.13e-6■■□□□ 11.5
XRN2Q9H0D6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.67□□□□□ -0.383e-6■■□□□ 11.5
XRN2Q9H0D6 NEU4-215ENST00000488997 541 ntTSL 425.52■■□□□ 1.683e-6■■□□□ 11.5
XRN2Q9H0D6 NEU4-212ENST00000435894 484 ntTSL 424.67■■□□□ 1.543e-6■■□□□ 11.5
XRN2Q9H0D6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.082e-6■■□□□ 11.5
XRN2Q9H0D6 ATP11A-209ENST00000466946 431 ntTSL 58.16□□□□□ -1.12e-6■■□□□ 11.5
XRN2Q9H0D6 SH2B1-212ENST00000567536 484 ntTSL 326.17■■□□□ 1.789e-10■■□□□ 11.5
XRN2Q9H0D6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 14e-11■■□□□ 11.5
XRN2Q9H0D6 SNHG22-202ENST00000615535 421 nt19.01■□□□□ 0.631e-323■■□□□ 11.5
XRN2Q9H0D6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.57■□□□□ 0.561e-323■■□□□ 11.5
XRN2Q9H0D6 FLNA-217ENST00000498411 368 ntTSL 316.58■□□□□ 0.243e-7■■□□□ 11.5
XRN2Q9H0D6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.64■□□□□ 0.731e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.85■□□□□ 0.611e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-208ENST00000409627 722 ntTSL 318.85■□□□□ 0.611e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.85■□□□□ 0.611e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.311e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17■□□□□ 0.311e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17■□□□□ 0.311e-6■■□□□ 11.5
XRN2Q9H0D6 SLC43A1-209ENST00000533515 774 ntTSL 515.8■□□□□ 0.122e-9■■□□□ 11.5
XRN2Q9H0D6 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC15.3■□□□□ 0.041e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.011e-6■■□□□ 11.5
XRN2Q9H0D6 SLC43A1-205ENST00000529452 821 ntTSL 314.83□□□□□ -0.042e-9■■□□□ 11.5
XRN2Q9H0D6 TMEM259-204ENST00000586285 626 ntTSL 313.83□□□□□ -0.21e-6■■□□□ 11.5
XRN2Q9H0D6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.6□□□□□ -1.671e-6■■□□□ 11.5
XRN2Q9H0D6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.322e-6■■□□□ 11.5
XRN2Q9H0D6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.952e-6■■□□□ 11.5
XRN2Q9H0D6 TMEM56-203ENST00000456991 992 ntTSL 326.36■■□□□ 1.816e-7■■□□□ 11.5
XRN2Q9H0D6 ZEB2-221ENST00000479735 543 ntTSL 423.4■■□□□ 1.349e-18■■□□□ 11.5
XRN2Q9H0D6 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.426e-7■■□□□ 11.5
XRN2Q9H0D6 GATS-204ENST00000435519 1306 ntTSL 232.35■■■□□ 2.773e-6■■□□□ 11.5
XRN2Q9H0D6 GATS-202ENST00000414739 2007 ntTSL 1 (best)25.07■■□□□ 1.63e-6■■□□□ 11.5
XRN2Q9H0D6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.89■■□□□ 1.413e-6■■□□□ 11.5
XRN2Q9H0D6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.213e-6■■□□□ 11.5
XRN2Q9H0D6 GATS-211ENST00000543273 2840 ntTSL 1 (best)21.11■□□□□ 0.973e-6■■□□□ 11.5
XRN2Q9H0D6 GATS-201ENST00000328453 3526 ntTSL 1 (best)17.21■□□□□ 0.343e-6■■□□□ 11.5
XRN2Q9H0D6 GATS-206ENST00000437485 443 ntTSL 512.05□□□□□ -0.483e-6■■□□□ 11.5
XRN2Q9H0D6 GATS-207ENST00000440058 554 ntTSL 211.38□□□□□ -0.593e-6■■□□□ 11.5
XRN2Q9H0D6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.529e-7■■□□□ 11.5
XRN2Q9H0D6 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.731e-6■■□□□ 11.5
XRN2Q9H0D6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.12■□□□□ 0.492e-9■■□□□ 11.5
XRN2Q9H0D6 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.65■□□□□ 0.12e-9■■□□□ 11.5
XRN2Q9H0D6 FADS1-210ENST00000496123 693 ntTSL 513□□□□□ -0.332e-9■■□□□ 11.5
XRN2Q9H0D6 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC9.17□□□□□ -0.942e-9■■□□□ 11.5
XRN2Q9H0D6 FADS1-213ENST00000539999 405 ntTSL 36.78□□□□□ -1.322e-9■■□□□ 11.5
XRN2Q9H0D6 P4HB-204ENST00000466567 872 ntTSL 224.99■■□□□ 1.599e-13■■□□□ 11.5
XRN2Q9H0D6 MAPK1IP1L-204ENST00000556515 534 ntTSL 412.31□□□□□ -0.442e-6■■□□□ 11.5
Retrieved 100 of 21,068 protein–RNA pairs in 113.6 ms