RNA–Protein interactions for RNA: ENST00000489152.5

TTC31-212, Transcript of tetratricopeptide repeat domain 31, humanhuman

TSL 2

Gene TTC31, Length 4,025 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC31-212ENST00000489152 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
TTC31-212ENST00000489152 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
TTC31-212ENST00000489152 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
TTC31-212ENST00000489152 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
TTC31-212ENST00000489152 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
TTC31-212ENST00000489152 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
TTC31-212ENST00000489152 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
TTC31-212ENST00000489152 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
TTC31-212ENST00000489152 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
TTC31-212ENST00000489152 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
TTC31-212ENST00000489152 HRCP23327 699 aa15.65■□□□□ 0.1
TTC31-212ENST00000489152 FAM9AQ8IZU1 332 aaPredicted RBP15.61■□□□□ 0.09
TTC31-212ENST00000489152 MYT1Q01538 1121 aa15.58■□□□□ 0.08
TTC31-212ENST00000489152 MYO15BQ96JP2 1530 aa15.47■□□□□ 0.07
TTC31-212ENST00000489152 TTBK1Q5TCY1 1321 aaPredicted RBP15.34■□□□□ 0.05
TTC31-212ENST00000489152 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
TTC31-212ENST00000489152 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
TTC31-212ENST00000489152 ZCCHC6Q5VYS8 1495 aaKnown RBP15.21■□□□□ 0.03
TTC31-212ENST00000489152 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
TTC31-212ENST00000489152 ABCC9O60706 1549 aa15.12■□□□□ 0.01
TTC31-212ENST00000489152 CENPBP07199 599 aaPredicted RBP15.1■□□□□ 0.01
TTC31-212ENST00000489152 CCER1Q8TC90 406 aaPredicted RBP14.95□□□□□ -0.02
TTC31-212ENST00000489152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
TTC31-212ENST00000489152 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
TTC31-212ENST00000489152 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
TTC31-212ENST00000489152 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.04
TTC31-212ENST00000489152 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
TTC31-212ENST00000489152 UBTFP17480 764 aaKnown RBP14.72□□□□□ -0.05
TTC31-212ENST00000489152 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
TTC31-212ENST00000489152 SCRIBQ14160 1630 aa14.68□□□□□ -0.06
TTC31-212ENST00000489152 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
TTC31-212ENST00000489152 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
TTC31-212ENST00000489152 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
TTC31-212ENST00000489152 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.07
TTC31-212ENST00000489152 GTF3C3Q9Y5Q9 886 aa14.56□□□□□ -0.08
TTC31-212ENST00000489152 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
TTC31-212ENST00000489152 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
TTC31-212ENST00000489152 APLP2Q06481 763 aa14.48□□□□□ -0.09
TTC31-212ENST00000489152 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.1
TTC31-212ENST00000489152 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
TTC31-212ENST00000489152 ERICH6Q7L0X2 663 aa14.38□□□□□ -0.11
TTC31-212ENST00000489152 ITGAEP38570 1179 aa14.34□□□□□ -0.11
TTC31-212ENST00000489152 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.12
TTC31-212ENST00000489152 ZNF316A6NFI3 1004 aaPredicted RBP14.26□□□□□ -0.13
TTC31-212ENST00000489152 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
TTC31-212ENST00000489152 NEFLP07196 543 aa14.21□□□□□ -0.13
TTC31-212ENST00000489152 MIER1Q8N108 512 aa14.21□□□□□ -0.13
TTC31-212ENST00000489152 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.14
TTC31-212ENST00000489152 SOGA1O94964 1423 aa14.17□□□□□ -0.14
TTC31-212ENST00000489152 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
TTC31-212ENST00000489152 CEP162Q5TB80 1403 aa14.16□□□□□ -0.14
TTC31-212ENST00000489152 WIZO95785 1651 aa14.14□□□□□ -0.15
TTC31-212ENST00000489152 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
TTC31-212ENST00000489152 BCANQ96GW7 911 aa14.06□□□□□ -0.16
TTC31-212ENST00000489152 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
TTC31-212ENST00000489152 CLSPNQ9HAW4 1339 aa14.03□□□□□ -0.16
TTC31-212ENST00000489152 TNIKQ9UKE5 1360 aa13.96□□□□□ -0.18
TTC31-212ENST00000489152 CLIP1P30622 1438 aa13.93□□□□□ -0.18
TTC31-212ENST00000489152 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
TTC31-212ENST00000489152 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
TTC31-212ENST00000489152 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
TTC31-212ENST00000489152 NACADO15069 1562 aa13.9□□□□□ -0.18
TTC31-212ENST00000489152 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
TTC31-212ENST00000489152 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
TTC31-212ENST00000489152 BAZ1AQ9NRL2 1556 aaPredicted RBP13.87□□□□□ -0.19
TTC31-212ENST00000489152 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
TTC31-212ENST00000489152 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
TTC31-212ENST00000489152 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
TTC31-212ENST00000489152 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
TTC31-212ENST00000489152 KANK4Q5T7N3 995 aaPredicted RBP13.83□□□□□ -0.19
TTC31-212ENST00000489152 DDX10Q13206 875 aaKnown RBP13.82□□□□□ -0.2
TTC31-212ENST00000489152 KCNH8Q96L42 1107 aa13.79□□□□□ -0.2
TTC31-212ENST00000489152 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
TTC31-212ENST00000489152 FKBP8Q14318 412 aa13.74□□□□□ -0.21
TTC31-212ENST00000489152 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
TTC31-212ENST00000489152 EEA1Q15075 1411 aa13.73□□□□□ -0.21
TTC31-212ENST00000489152 SIN3AQ96ST3 1273 aa13.73□□□□□ -0.21
TTC31-212ENST00000489152 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
TTC31-212ENST00000489152 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
TTC31-212ENST00000489152 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
TTC31-212ENST00000489152 RAPGEF2Q9Y4G8 1499 aa13.72□□□□□ -0.21
TTC31-212ENST00000489152 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
TTC31-212ENST00000489152 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
TTC31-212ENST00000489152 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
TTC31-212ENST00000489152 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
TTC31-212ENST00000489152 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
TTC31-212ENST00000489152 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
TTC31-212ENST00000489152 POLR3GLQ9BT43 218 aa13.65□□□□□ -0.22
TTC31-212ENST00000489152 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
TTC31-212ENST00000489152 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
TTC31-212ENST00000489152 DHX57Q6P158 1386 aaKnown RBP13.6□□□□□ -0.23
TTC31-212ENST00000489152 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
TTC31-212ENST00000489152 ANP32CO43423 234 aa13.59□□□□□ -0.23
TTC31-212ENST00000489152 FBLN2P98095 1184 aa13.54□□□□□ -0.24
TTC31-212ENST00000489152 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
TTC31-212ENST00000489152 CHIC2Q9UKJ5 165 aa13.54□□□□□ -0.24
TTC31-212ENST00000489152 SYNJ1O43426 1573 aa13.53□□□□□ -0.24
TTC31-212ENST00000489152 CCNB3Q8WWL7 1395 aa13.53□□□□□ -0.24
TTC31-212ENST00000489152 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
TTC31-212ENST00000489152 ERCC6Q03468 1493 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms