RNA–Protein interactions for RNA: ENST00000588111.1

MGRN1-210, Transcript of mahogunin ring finger 1, humanhuman

TSL 3

Gene MGRN1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1-210ENST00000588111 NISCHQ9Y2I1 1504 aa34.51■■■■□ 3.12
MGRN1-210ENST00000588111 ABCC9O60706 1549 aa31.77■■■□□ 2.68
MGRN1-210ENST00000588111 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
MGRN1-210ENST00000588111 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
MGRN1-210ENST00000588111 RB1CC1Q8TDY2 1594 aa30.02■■■□□ 2.4
MGRN1-210ENST00000588111 NACADO15069 1562 aa29.62■■■□□ 2.33
MGRN1-210ENST00000588111 UNC13AQ9UPW8 1703 aa29.53■■■□□ 2.32
MGRN1-210ENST00000588111 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
MGRN1-210ENST00000588111 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
MGRN1-210ENST00000588111 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
MGRN1-210ENST00000588111 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
MGRN1-210ENST00000588111 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
MGRN1-210ENST00000588111 CECR2Q9BXF3 1484 aa28.63■■■□□ 2.17
MGRN1-210ENST00000588111 SHROOM4Q9ULL8 1493 aa28.56■■■□□ 2.16
MGRN1-210ENST00000588111 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
MGRN1-210ENST00000588111 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
MGRN1-210ENST00000588111 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
MGRN1-210ENST00000588111 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
MGRN1-210ENST00000588111 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
MGRN1-210ENST00000588111 CUX2O14529 1486 aa27.51■■□□□ 1.99
MGRN1-210ENST00000588111 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
MGRN1-210ENST00000588111 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
MGRN1-210ENST00000588111 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
MGRN1-210ENST00000588111 NESP48681 1621 aa27.14■■□□□ 1.94
MGRN1-210ENST00000588111 SMARCA2P51531 1590 aa27.12■■□□□ 1.93
MGRN1-210ENST00000588111 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
MGRN1-210ENST00000588111 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
MGRN1-210ENST00000588111 THOC2Q8NI27 1593 aaKnown RBP26.98■■□□□ 1.91
MGRN1-210ENST00000588111 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.91
MGRN1-210ENST00000588111 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
MGRN1-210ENST00000588111 BAZ1AQ9NRL2 1556 aaPredicted RBP26.86■■□□□ 1.89
MGRN1-210ENST00000588111 LAMC3Q9Y6N6 1575 aa26.86■■□□□ 1.89
MGRN1-210ENST00000588111 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
MGRN1-210ENST00000588111 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
MGRN1-210ENST00000588111 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
MGRN1-210ENST00000588111 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
MGRN1-210ENST00000588111 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
MGRN1-210ENST00000588111 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
MGRN1-210ENST00000588111 WDR62O43379 1518 aa26.44■■□□□ 1.82
MGRN1-210ENST00000588111 WIZO95785 1651 aa26.39■■□□□ 1.82
MGRN1-210ENST00000588111 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
MGRN1-210ENST00000588111 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
MGRN1-210ENST00000588111 OSCARQ8IYS5 282 aa26.17■■□□□ 1.78
MGRN1-210ENST00000588111 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
MGRN1-210ENST00000588111 CFTRP13569 1480 aa26.03■■□□□ 1.76
MGRN1-210ENST00000588111 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
MGRN1-210ENST00000588111 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
MGRN1-210ENST00000588111 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
MGRN1-210ENST00000588111 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
MGRN1-210ENST00000588111 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
MGRN1-210ENST00000588111 RSF1Q96T23 1441 aaPredicted RBP25.82■■□□□ 1.72
MGRN1-210ENST00000588111 ARHGEF11O15085 1522 aa25.8■■□□□ 1.72
MGRN1-210ENST00000588111 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
MGRN1-210ENST00000588111 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
MGRN1-210ENST00000588111 CHD1O14646 1710 aa25.74■■□□□ 1.71
MGRN1-210ENST00000588111 EIF4G3O43432 1585 aaKnown RBP25.71■■□□□ 1.71
MGRN1-210ENST00000588111 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
MGRN1-210ENST00000588111 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
MGRN1-210ENST00000588111 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
MGRN1-210ENST00000588111 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
MGRN1-210ENST00000588111 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
MGRN1-210ENST00000588111 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
MGRN1-210ENST00000588111 FBLN2P98095 1184 aa25.52■■□□□ 1.68
MGRN1-210ENST00000588111 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
MGRN1-210ENST00000588111 AQRO60306 1485 aaKnown RBP eCLIP25.5■■□□□ 1.677e-7■■■■■ 45
MGRN1-210ENST00000588111 ARAP1Q96P48 1450 aa25.49■■□□□ 1.67
MGRN1-210ENST00000588111 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
MGRN1-210ENST00000588111 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
MGRN1-210ENST00000588111 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
MGRN1-210ENST00000588111 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
MGRN1-210ENST00000588111 AEBP2Q6ZN18 517 aaPredicted RBP25.24■■□□□ 1.63
MGRN1-210ENST00000588111 SOGA1O94964 1423 aa25.23■■□□□ 1.63
MGRN1-210ENST00000588111 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
MGRN1-210ENST00000588111 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
MGRN1-210ENST00000588111 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
MGRN1-210ENST00000588111 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
MGRN1-210ENST00000588111 FGD5Q6ZNL6 1462 aa25.16■■□□□ 1.62
MGRN1-210ENST00000588111 PBRM1Q86U86 1689 aa25.14■■□□□ 1.62
MGRN1-210ENST00000588111 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
MGRN1-210ENST00000588111 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
MGRN1-210ENST00000588111 CUX1P39880 1505 aa25.05■■□□□ 1.6
MGRN1-210ENST00000588111 SYNJ2O15056 1496 aa25.04■■□□□ 1.6
MGRN1-210ENST00000588111 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
MGRN1-210ENST00000588111 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
MGRN1-210ENST00000588111 ERCC6L2Q5T890 1561 aa24.85■■□□□ 1.57
MGRN1-210ENST00000588111 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
MGRN1-210ENST00000588111 KIF13AQ9H1H9 1805 aa24.78■■□□□ 1.56
MGRN1-210ENST00000588111 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
MGRN1-210ENST00000588111 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
MGRN1-210ENST00000588111 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
MGRN1-210ENST00000588111 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
MGRN1-210ENST00000588111 NUP160Q12769 1436 aa24.63■■□□□ 1.53
MGRN1-210ENST00000588111 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
MGRN1-210ENST00000588111 BIVM-ERCC5R4GMW8 1640 aa24.58■■□□□ 1.53
MGRN1-210ENST00000588111 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
MGRN1-210ENST00000588111 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
MGRN1-210ENST00000588111 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
MGRN1-210ENST00000588111 ERICH3Q5RHP9 1530 aa24.49■■□□□ 1.51
MGRN1-210ENST00000588111 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
MGRN1-210ENST00000588111 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms