RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 NISCHQ9Y2I1 1504 aa53.88■■■■■ 6.22
TMEM56-203ENST00000456991 ABCC9O60706 1549 aa48.65■■■■■ 5.38
TMEM56-203ENST00000456991 CCDC180Q9P1Z9 1646 aa48.29■■■■■ 5.32
TMEM56-203ENST00000456991 RB1CC1Q8TDY2 1594 aa46.18■■■■■ 4.98
TMEM56-203ENST00000456991 DNAJC5BQ9UF47 199 aa45.9■■■■■ 4.94
TMEM56-203ENST00000456991 NACADO15069 1562 aa45.84■■■■■ 4.93
TMEM56-203ENST00000456991 DCAF8L2P0C7V8 631 aa45.75■■■■■ 4.91
TMEM56-203ENST00000456991 PABPN1Q86U42 306 aaKnown RBP eCLIP45.36■■■■■ 4.85
TMEM56-203ENST00000456991 MYO15BQ96JP2 1530 aa45.16■■■■■ 4.82
TMEM56-203ENST00000456991 UNC13AQ9UPW8 1703 aa44.89■■■■■ 4.78
TMEM56-203ENST00000456991 BICRAQ9NZM4 1560 aa44.78■■■■■ 4.76
TMEM56-203ENST00000456991 ZCCHC6Q5VYS8 1495 aaKnown RBP44.57■■■■■ 4.73
TMEM56-203ENST00000456991 DCAF1Q9Y4B6 1507 aa44.49■■■■■ 4.71
TMEM56-203ENST00000456991 SHROOM4Q9ULL8 1493 aa44.25■■■■■ 4.67
TMEM56-203ENST00000456991 SCRIBQ14160 1630 aa44.04■■■■■ 4.64
TMEM56-203ENST00000456991 CECR2Q9BXF3 1484 aa43.87■■■■■ 4.61
TMEM56-203ENST00000456991 CC2D2AQ9P2K1 1620 aa43.86■■■■■ 4.61
TMEM56-203ENST00000456991 EIF4G1Q04637 1599 aaKnown RBP43.74■■■■■ 4.59
TMEM56-203ENST00000456991 NCAPD3P42695 1498 aa42.38■■■■■ 4.38
TMEM56-203ENST00000456991 DNAJC5Q9H3Z4 198 aa42.36■■■■■ 4.37
TMEM56-203ENST00000456991 ATAD2BQ9ULI0 1458 aa42.19■■■■■ 4.34
TMEM56-203ENST00000456991 ERCC6Q03468 1493 aa42.05■■■■■ 4.32
TMEM56-203ENST00000456991 SMARCA2P51531 1590 aa42.03■■■■■ 4.32
TMEM56-203ENST00000456991 CUX2O14529 1486 aa42.03■■■■■ 4.32
TMEM56-203ENST00000456991 SMARCA4P51532 1647 aa41.99■■■■■ 4.31
TMEM56-203ENST00000456991 HMGXB3Q12766 1538 aa41.95■■■■■ 4.31
TMEM56-203ENST00000456991 BAZ1AQ9NRL2 1556 aaPredicted RBP41.82■■■■■ 4.29
TMEM56-203ENST00000456991 BAZ1BQ9UIG0 1483 aaKnown RBP41.76■■■■■ 4.28
TMEM56-203ENST00000456991 NESP48681 1621 aa41.7■■■■■ 4.27
TMEM56-203ENST00000456991 PEG3Q9GZU2 1588 aa41.61■■■■■ 4.25
TMEM56-203ENST00000456991 MROH2BQ7Z745 1585 aa41.49■■■■■ 4.23
TMEM56-203ENST00000456991 LAMC3Q9Y6N6 1575 aa41.37■■■■■ 4.21
TMEM56-203ENST00000456991 PDS5BQ9NTI5 1447 aa41.27■■■■■ 4.2
TMEM56-203ENST00000456991 THOC2Q8NI27 1593 aaKnown RBP41.22■■■■■ 4.19
TMEM56-203ENST00000456991 CADPSQ9ULU8 1353 aa41.12■■■■■ 4.17
TMEM56-203ENST00000456991 KIF21AQ7Z4S6 1674 aa41■■■■■ 4.15
TMEM56-203ENST00000456991 WIZO95785 1651 aa40.91■■■■■ 4.14
TMEM56-203ENST00000456991 MRC2Q9UBG0 1479 aa40.83■■■■■ 4.13
TMEM56-203ENST00000456991 WDR62O43379 1518 aa40.69■■■■■ 4.1
TMEM56-203ENST00000456991 CEP164Q9UPV0 1460 aa40.64■■■■■ 4.1
TMEM56-203ENST00000456991 RSF1Q96T23 1441 aaPredicted RBP40.62■■■■■ 4.09
TMEM56-203ENST00000456991 FANCD2Q9BXW9 1451 aa40.58■■■■■ 4.09
TMEM56-203ENST00000456991 CFTRP13569 1480 aa40.55■■■■■ 4.08
TMEM56-203ENST00000456991 TOP2AP11388 1531 aaKnown RBP40.43■■■■■ 4.06
TMEM56-203ENST00000456991 TRIM41Q8WV44 630 aa40.39■■■■■ 4.06
TMEM56-203ENST00000456991 URB2Q14146 1524 aaKnown RBP40.22■■■■■ 4.03
TMEM56-203ENST00000456991 OSCARQ8IYS5 282 aa40.22■■■■■ 4.03
TMEM56-203ENST00000456991 CCDC88BA6NC98 1476 aa40.05■■■■■ 4
TMEM56-203ENST00000456991 IFT140Q96RY7 1462 aa39.86■■■■□ 3.97
TMEM56-203ENST00000456991 PRDM2Q13029 1718 aa39.84■■■■□ 3.97
TMEM56-203ENST00000456991 ZNF608Q9ULD9 1512 aaPredicted RBP39.78■■■■□ 3.96
TMEM56-203ENST00000456991 TOPBP1Q92547 1522 aa39.76■■■■□ 3.96
TMEM56-203ENST00000456991 ABCC8Q09428 1581 aa39.73■■■■□ 3.95
TMEM56-203ENST00000456991 DNMBPQ6XZF7 1577 aa39.56■■■■□ 3.92
TMEM56-203ENST00000456991 RIMBP3CA6NJZ7 1639 aa39.47■■■■□ 3.91
TMEM56-203ENST00000456991 RIMBP3BA6NNM3 1639 aa39.47■■■■□ 3.91
TMEM56-203ENST00000456991 RIMBP3Q9UFD9 1639 aa39.47■■■■□ 3.91
TMEM56-203ENST00000456991 EIF4G3O43432 1585 aaKnown RBP39.45■■■■□ 3.91
TMEM56-203ENST00000456991 AQRO60306 1485 aaKnown RBP eCLIP39.44■■■■□ 3.94e-6■□□□□ 10.8
TMEM56-203ENST00000456991 ARHGEF11O15085 1522 aa39.4■■■■□ 3.9
TMEM56-203ENST00000456991 TARBP1Q13395 1621 aaKnown RBP39.36■■■■□ 3.89
TMEM56-203ENST00000456991 POLA1P09884 1462 aaPredicted RBP39.35■■■■□ 3.89
TMEM56-203ENST00000456991 FBLN2P98095 1184 aa39.32■■■■□ 3.89
TMEM56-203ENST00000456991 CYB5RLQ6IPT4 315 aa39.28■■■■□ 3.88
TMEM56-203ENST00000456991 SOGA1O94964 1423 aa39.26■■■■□ 3.88
TMEM56-203ENST00000456991 RAD54L2Q9Y4B4 1467 aa39.23■■■■□ 3.87
TMEM56-203ENST00000456991 TDRD9Q8NDG6 1382 aaKnown RBP39.2■■■■□ 3.87
TMEM56-203ENST00000456991 CHD1O14646 1710 aa39.12■■■■□ 3.85
TMEM56-203ENST00000456991 FGD5Q6ZNL6 1462 aa39.07■■■■□ 3.85
TMEM56-203ENST00000456991 CHMP7Q8WUX9 453 aaPredicted RBP39.01■■■■□ 3.84
TMEM56-203ENST00000456991 ARAP1Q96P48 1450 aa39■■■■□ 3.83
TMEM56-203ENST00000456991 SNAPC4Q5SXM2 1469 aa38.99■■■■□ 3.83
TMEM56-203ENST00000456991 CUX1P39880 1505 aa38.99■■■■□ 3.83
TMEM56-203ENST00000456991 WDR97A6NE52 1622 aa38.97■■■■□ 3.83
TMEM56-203ENST00000456991 TRHP20396 242 aaPredicted RBP38.91■■■■□ 3.82
TMEM56-203ENST00000456991 GRIN2BQ13224 1484 aa38.9■■■■□ 3.82
TMEM56-203ENST00000456991 MAGI1Q96QZ7 1491 aaPredicted RBP38.9■■■■□ 3.82
TMEM56-203ENST00000456991 CLASP1Q7Z460 1538 aa38.79■■■■□ 3.8
TMEM56-203ENST00000456991 SYNJ2O15056 1496 aa38.78■■■■□ 3.8
TMEM56-203ENST00000456991 SYNJ1O43426 1573 aa38.78■■■■□ 3.8
TMEM56-203ENST00000456991 SUPT5HO00267 1087 aaKnown RBP38.76■■■■□ 3.8
TMEM56-203ENST00000456991 GAPVD1Q14C86 1478 aa38.73■■■■□ 3.79
TMEM56-203ENST00000456991 ABCA10Q8WWZ4 1543 aa38.63■■■■□ 3.78
TMEM56-203ENST00000456991 WRNQ14191 1432 aaPredicted RBP eCLIP38.52■■■■□ 3.76
TMEM56-203ENST00000456991 PBRM1Q86U86 1689 aa38.52■■■■□ 3.76
TMEM56-203ENST00000456991 ABCA5Q8WWZ7 1642 aa38.49■■■■□ 3.75
TMEM56-203ENST00000456991 GRIN2AQ12879 1464 aa38.36■■■■□ 3.73
TMEM56-203ENST00000456991 TOP2BQ02880 1626 aa38.27■■■■□ 3.72
TMEM56-203ENST00000456991 FHAD1B1AJZ9 1412 aa38.26■■■■□ 3.72
TMEM56-203ENST00000456991 NUP160Q12769 1436 aa38.26■■■■□ 3.72
TMEM56-203ENST00000456991 ADAMTS12P58397 1594 aa38.23■■■■□ 3.71
TMEM56-203ENST00000456991 BIVM-ERCC5R4GMW8 1640 aa38.22■■■■□ 3.71
TMEM56-203ENST00000456991 CEP170Q5SW79 1584 aa38.17■■■■□ 3.7
TMEM56-203ENST00000456991 ERCC6L2Q5T890 1561 aa38.16■■■■□ 3.7
TMEM56-203ENST00000456991 ERICH3Q5RHP9 1530 aa38.13■■■■□ 3.69
TMEM56-203ENST00000456991 JPH4Q96JJ6 628 aa38■■■■□ 3.67
TMEM56-203ENST00000456991 SHROOM2Q13796 1616 aa38■■■■□ 3.67
TMEM56-203ENST00000456991 AEBP2Q6ZN18 517 aaPredicted RBP37.95■■■■□ 3.67
TMEM56-203ENST00000456991 PRG4Q92954 1404 aaPredicted RBP37.95■■■■□ 3.67
TMEM56-203ENST00000456991 NPM1P06748 294 aaKnown RBP eCLIP37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms