RNA–Protein interactions for RNA: ENST00000519228.5

NDRG1-211, Transcript of N-myc downstream regulated 1, humanhuman

TSL 4

Gene NDRG1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-211ENST00000519228 NISCHQ9Y2I1 1504 aa37.57■■■■□ 3.61
NDRG1-211ENST00000519228 ABCC9O60706 1549 aa33.65■■■□□ 2.98
NDRG1-211ENST00000519228 CCDC180Q9P1Z9 1646 aa33.55■■■□□ 2.96
NDRG1-211ENST00000519228 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
NDRG1-211ENST00000519228 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
NDRG1-211ENST00000519228 NACADO15069 1562 aa31.76■■■□□ 2.67
NDRG1-211ENST00000519228 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
NDRG1-211ENST00000519228 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.62
NDRG1-211ENST00000519228 MYO15BQ96JP2 1530 aa31.3■■■□□ 2.6
NDRG1-211ENST00000519228 UNC13AQ9UPW8 1703 aa31.17■■■□□ 2.58
NDRG1-211ENST00000519228 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.58
NDRG1-211ENST00000519228 BICRAQ9NZM4 1560 aa31.04■■■□□ 2.56
NDRG1-211ENST00000519228 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
NDRG1-211ENST00000519228 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
NDRG1-211ENST00000519228 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
NDRG1-211ENST00000519228 CC2D2AQ9P2K1 1620 aa30.32■■■□□ 2.44
NDRG1-211ENST00000519228 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
NDRG1-211ENST00000519228 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.44
NDRG1-211ENST00000519228 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
NDRG1-211ENST00000519228 ATAD2BQ9ULI0 1458 aa29.3■■■□□ 2.28
NDRG1-211ENST00000519228 SMARCA4P51532 1647 aa29.26■■■□□ 2.27
NDRG1-211ENST00000519228 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
NDRG1-211ENST00000519228 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
NDRG1-211ENST00000519228 HMGXB3Q12766 1538 aa29.1■■■□□ 2.25
NDRG1-211ENST00000519228 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
NDRG1-211ENST00000519228 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
NDRG1-211ENST00000519228 MROH2BQ7Z745 1585 aa28.99■■■□□ 2.23
NDRG1-211ENST00000519228 NESP48681 1621 aa28.93■■■□□ 2.22
NDRG1-211ENST00000519228 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
NDRG1-211ENST00000519228 CUX2O14529 1486 aa28.85■■■□□ 2.21
NDRG1-211ENST00000519228 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
NDRG1-211ENST00000519228 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
NDRG1-211ENST00000519228 WIZO95785 1651 aa28.62■■■□□ 2.17
NDRG1-211ENST00000519228 PDS5BQ9NTI5 1447 aa28.53■■■□□ 2.16
NDRG1-211ENST00000519228 CADPSQ9ULU8 1353 aa28.51■■■□□ 2.16
NDRG1-211ENST00000519228 THOC2Q8NI27 1593 aaKnown RBP28.5■■■□□ 2.15
NDRG1-211ENST00000519228 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
NDRG1-211ENST00000519228 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
NDRG1-211ENST00000519228 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
NDRG1-211ENST00000519228 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
NDRG1-211ENST00000519228 CEP164Q9UPV0 1460 aa28.19■■■□□ 2.1
NDRG1-211ENST00000519228 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
NDRG1-211ENST00000519228 CFTRP13569 1480 aa28.17■■■□□ 2.1
NDRG1-211ENST00000519228 WDR62O43379 1518 aa28.17■■■□□ 2.1
NDRG1-211ENST00000519228 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
NDRG1-211ENST00000519228 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
NDRG1-211ENST00000519228 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
NDRG1-211ENST00000519228 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
NDRG1-211ENST00000519228 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
NDRG1-211ENST00000519228 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
NDRG1-211ENST00000519228 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
NDRG1-211ENST00000519228 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
NDRG1-211ENST00000519228 ABCC8Q09428 1581 aa27.55■■■□□ 2
NDRG1-211ENST00000519228 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
NDRG1-211ENST00000519228 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
NDRG1-211ENST00000519228 AQRO60306 1485 aaKnown RBP eCLIP27.39■■□□□ 1.983e-8■■■■■ 26.8
NDRG1-211ENST00000519228 EIF4G3O43432 1585 aaKnown RBP27.39■■□□□ 1.97
NDRG1-211ENST00000519228 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
NDRG1-211ENST00000519228 TARBP1Q13395 1621 aaKnown RBP27.34■■□□□ 1.97
NDRG1-211ENST00000519228 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
NDRG1-211ENST00000519228 SOGA1O94964 1423 aa27.3■■□□□ 1.96
NDRG1-211ENST00000519228 FBLN2P98095 1184 aa27.27■■□□□ 1.96
NDRG1-211ENST00000519228 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
NDRG1-211ENST00000519228 FGD5Q6ZNL6 1462 aa27.24■■□□□ 1.95
NDRG1-211ENST00000519228 CUX1P39880 1505 aa27.22■■□□□ 1.95
NDRG1-211ENST00000519228 RIMBP3CA6NJZ7 1639 aa27.2■■□□□ 1.95
NDRG1-211ENST00000519228 RIMBP3BA6NNM3 1639 aa27.2■■□□□ 1.95
NDRG1-211ENST00000519228 RIMBP3Q9UFD9 1639 aa27.2■■□□□ 1.95
NDRG1-211ENST00000519228 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
NDRG1-211ENST00000519228 CHD1O14646 1710 aa27.13■■□□□ 1.93
NDRG1-211ENST00000519228 SNAPC4Q5SXM2 1469 aa27.09■■□□□ 1.93
NDRG1-211ENST00000519228 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
NDRG1-211ENST00000519228 CHMP7Q8WUX9 453 aaPredicted RBP27.04■■□□□ 1.92
NDRG1-211ENST00000519228 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
NDRG1-211ENST00000519228 GRIN2BQ13224 1484 aa27■■□□□ 1.91
NDRG1-211ENST00000519228 MAGI1Q96QZ7 1491 aaPredicted RBP26.96■■□□□ 1.91
NDRG1-211ENST00000519228 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
NDRG1-211ENST00000519228 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
NDRG1-211ENST00000519228 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
NDRG1-211ENST00000519228 ABCA10Q8WWZ4 1543 aa26.89■■□□□ 1.89
NDRG1-211ENST00000519228 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
NDRG1-211ENST00000519228 WRNQ14191 1432 aaPredicted RBP eCLIP26.85■■□□□ 1.89
NDRG1-211ENST00000519228 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
NDRG1-211ENST00000519228 PBRM1Q86U86 1689 aa26.83■■□□□ 1.89
NDRG1-211ENST00000519228 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
NDRG1-211ENST00000519228 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
NDRG1-211ENST00000519228 TRHP20396 242 aaPredicted RBP26.75■■□□□ 1.87
NDRG1-211ENST00000519228 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
NDRG1-211ENST00000519228 GRIN2AQ12879 1464 aa26.65■■□□□ 1.86
NDRG1-211ENST00000519228 ADAMTS12P58397 1594 aa26.62■■□□□ 1.85
NDRG1-211ENST00000519228 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
NDRG1-211ENST00000519228 NUP160Q12769 1436 aa26.55■■□□□ 1.84
NDRG1-211ENST00000519228 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
NDRG1-211ENST00000519228 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
NDRG1-211ENST00000519228 ERCC6L2Q5T890 1561 aa26.5■■□□□ 1.83
NDRG1-211ENST00000519228 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
NDRG1-211ENST00000519228 SHROOM2Q13796 1616 aa26.36■■□□□ 1.81
NDRG1-211ENST00000519228 PRG4Q92954 1404 aaPredicted RBP26.34■■□□□ 1.81
NDRG1-211ENST00000519228 IGF1RP08069 1367 aa26.32■■□□□ 1.8
NDRG1-211ENST00000519228 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms