RNA–Protein interactions for RNA: ENST00000520943.5

NDRG1-215, Transcript of N-myc downstream regulated 1, humanhuman

TSL 4

Gene NDRG1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-215ENST00000520943 NISCHQ9Y2I1 1504 aa25.07■■□□□ 1.6
NDRG1-215ENST00000520943 ABCC9O60706 1549 aa22.47■■□□□ 1.19
NDRG1-215ENST00000520943 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
NDRG1-215ENST00000520943 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
NDRG1-215ENST00000520943 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
NDRG1-215ENST00000520943 NACADO15069 1562 aa21.24■□□□□ 0.99
NDRG1-215ENST00000520943 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
NDRG1-215ENST00000520943 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
NDRG1-215ENST00000520943 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
NDRG1-215ENST00000520943 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
NDRG1-215ENST00000520943 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
NDRG1-215ENST00000520943 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
NDRG1-215ENST00000520943 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
NDRG1-215ENST00000520943 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
NDRG1-215ENST00000520943 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
NDRG1-215ENST00000520943 CC2D2AQ9P2K1 1620 aa20.28■□□□□ 0.84
NDRG1-215ENST00000520943 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
NDRG1-215ENST00000520943 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
NDRG1-215ENST00000520943 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
NDRG1-215ENST00000520943 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
NDRG1-215ENST00000520943 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
NDRG1-215ENST00000520943 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
NDRG1-215ENST00000520943 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
NDRG1-215ENST00000520943 HMGXB3Q12766 1538 aa19.45■□□□□ 0.7
NDRG1-215ENST00000520943 ERCC6Q03468 1493 aa19.4■□□□□ 0.7
NDRG1-215ENST00000520943 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
NDRG1-215ENST00000520943 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
NDRG1-215ENST00000520943 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
NDRG1-215ENST00000520943 DNAJC5Q9H3Z4 198 aa19.32■□□□□ 0.68
NDRG1-215ENST00000520943 CUX2O14529 1486 aa19.32■□□□□ 0.68
NDRG1-215ENST00000520943 NESP48681 1621 aa19.31■□□□□ 0.68
NDRG1-215ENST00000520943 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
NDRG1-215ENST00000520943 WIZO95785 1651 aa19.11■□□□□ 0.65
NDRG1-215ENST00000520943 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
NDRG1-215ENST00000520943 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
NDRG1-215ENST00000520943 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
NDRG1-215ENST00000520943 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
NDRG1-215ENST00000520943 RSF1Q96T23 1441 aaPredicted RBP18.94■□□□□ 0.62
NDRG1-215ENST00000520943 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
NDRG1-215ENST00000520943 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
NDRG1-215ENST00000520943 WDR62O43379 1518 aa18.82■□□□□ 0.6
NDRG1-215ENST00000520943 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
NDRG1-215ENST00000520943 CFTRP13569 1480 aa18.81■□□□□ 0.6
NDRG1-215ENST00000520943 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
NDRG1-215ENST00000520943 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
NDRG1-215ENST00000520943 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
NDRG1-215ENST00000520943 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
NDRG1-215ENST00000520943 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
NDRG1-215ENST00000520943 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
NDRG1-215ENST00000520943 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
NDRG1-215ENST00000520943 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
NDRG1-215ENST00000520943 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
NDRG1-215ENST00000520943 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
NDRG1-215ENST00000520943 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
NDRG1-215ENST00000520943 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
NDRG1-215ENST00000520943 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.522e-8■■■■■ 28.2
NDRG1-215ENST00000520943 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
NDRG1-215ENST00000520943 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
NDRG1-215ENST00000520943 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
NDRG1-215ENST00000520943 SOGA1O94964 1423 aa18.22■□□□□ 0.51
NDRG1-215ENST00000520943 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.51
NDRG1-215ENST00000520943 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.51
NDRG1-215ENST00000520943 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.51
NDRG1-215ENST00000520943 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
NDRG1-215ENST00000520943 FBLN2P98095 1184 aa18.2■□□□□ 0.5
NDRG1-215ENST00000520943 CHD1O14646 1710 aa18.18■□□□□ 0.5
NDRG1-215ENST00000520943 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
NDRG1-215ENST00000520943 FGD5Q6ZNL6 1462 aa18.16■□□□□ 0.5
NDRG1-215ENST00000520943 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
NDRG1-215ENST00000520943 CUX1P39880 1505 aa18.15■□□□□ 0.5
NDRG1-215ENST00000520943 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
NDRG1-215ENST00000520943 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
NDRG1-215ENST00000520943 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
NDRG1-215ENST00000520943 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
NDRG1-215ENST00000520943 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
NDRG1-215ENST00000520943 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
NDRG1-215ENST00000520943 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
NDRG1-215ENST00000520943 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
NDRG1-215ENST00000520943 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
NDRG1-215ENST00000520943 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
NDRG1-215ENST00000520943 SYNJ1O43426 1573 aa17.96■□□□□ 0.46
NDRG1-215ENST00000520943 SYNJ2O15056 1496 aa17.95■□□□□ 0.46
NDRG1-215ENST00000520943 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
NDRG1-215ENST00000520943 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
NDRG1-215ENST00000520943 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
NDRG1-215ENST00000520943 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
NDRG1-215ENST00000520943 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
NDRG1-215ENST00000520943 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
NDRG1-215ENST00000520943 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
NDRG1-215ENST00000520943 ADAMTS12P58397 1594 aa17.78■□□□□ 0.44
NDRG1-215ENST00000520943 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
NDRG1-215ENST00000520943 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
NDRG1-215ENST00000520943 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
NDRG1-215ENST00000520943 NUP160Q12769 1436 aa17.72■□□□□ 0.43
NDRG1-215ENST00000520943 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
NDRG1-215ENST00000520943 SHROOM2Q13796 1616 aa17.63■□□□□ 0.41
NDRG1-215ENST00000520943 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
NDRG1-215ENST00000520943 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.41
NDRG1-215ENST00000520943 IGF1RP08069 1367 aa17.54■□□□□ 0.4
NDRG1-215ENST00000520943 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms