RNA–Protein interactions for RNA: ENST00000521544.5

NDRG1-219, Transcript of N-myc downstream regulated 1, humanhuman

TSL 5

Gene NDRG1, Length 709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-219ENST00000521544 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
NDRG1-219ENST00000521544 ABCC9O60706 1549 aa29.4■■■□□ 2.3
NDRG1-219ENST00000521544 CCDC180Q9P1Z9 1646 aa29.36■■■□□ 2.29
NDRG1-219ENST00000521544 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
NDRG1-219ENST00000521544 NACADO15069 1562 aa27.83■■■□□ 2.05
NDRG1-219ENST00000521544 DNAJC5BQ9UF47 199 aa27.82■■■□□ 2.04
NDRG1-219ENST00000521544 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
NDRG1-219ENST00000521544 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
NDRG1-219ENST00000521544 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
NDRG1-219ENST00000521544 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
NDRG1-219ENST00000521544 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
NDRG1-219ENST00000521544 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
NDRG1-219ENST00000521544 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
NDRG1-219ENST00000521544 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
NDRG1-219ENST00000521544 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
NDRG1-219ENST00000521544 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
NDRG1-219ENST00000521544 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
NDRG1-219ENST00000521544 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
NDRG1-219ENST00000521544 DNAJC5Q9H3Z4 198 aa25.87■■□□□ 1.73
NDRG1-219ENST00000521544 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
NDRG1-219ENST00000521544 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
NDRG1-219ENST00000521544 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
NDRG1-219ENST00000521544 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
NDRG1-219ENST00000521544 CUX2O14529 1486 aa25.49■■□□□ 1.67
NDRG1-219ENST00000521544 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
NDRG1-219ENST00000521544 BAZ1AQ9NRL2 1556 aaPredicted RBP25.36■■□□□ 1.65
NDRG1-219ENST00000521544 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
NDRG1-219ENST00000521544 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
NDRG1-219ENST00000521544 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
NDRG1-219ENST00000521544 NESP48681 1621 aa25.25■■□□□ 1.63
NDRG1-219ENST00000521544 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
NDRG1-219ENST00000521544 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
NDRG1-219ENST00000521544 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
NDRG1-219ENST00000521544 PDS5BQ9NTI5 1447 aa24.98■■□□□ 1.59
NDRG1-219ENST00000521544 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
NDRG1-219ENST00000521544 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
NDRG1-219ENST00000521544 WIZO95785 1651 aa24.79■■□□□ 1.56
NDRG1-219ENST00000521544 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
NDRG1-219ENST00000521544 WDR62O43379 1518 aa24.71■■□□□ 1.55
NDRG1-219ENST00000521544 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
NDRG1-219ENST00000521544 CFTRP13569 1480 aa24.63■■□□□ 1.53
NDRG1-219ENST00000521544 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
NDRG1-219ENST00000521544 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.52
NDRG1-219ENST00000521544 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
NDRG1-219ENST00000521544 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
NDRG1-219ENST00000521544 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
NDRG1-219ENST00000521544 OSCARQ8IYS5 282 aa24.3■■□□□ 1.48
NDRG1-219ENST00000521544 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
NDRG1-219ENST00000521544 PRDM2Q13029 1718 aa24.23■■□□□ 1.47
NDRG1-219ENST00000521544 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
NDRG1-219ENST00000521544 TOPBP1Q92547 1522 aa24.11■■□□□ 1.45
NDRG1-219ENST00000521544 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
NDRG1-219ENST00000521544 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
NDRG1-219ENST00000521544 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
NDRG1-219ENST00000521544 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
NDRG1-219ENST00000521544 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
NDRG1-219ENST00000521544 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
NDRG1-219ENST00000521544 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
NDRG1-219ENST00000521544 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
NDRG1-219ENST00000521544 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.412e-8■■■■■ 28.2
NDRG1-219ENST00000521544 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
NDRG1-219ENST00000521544 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
NDRG1-219ENST00000521544 SOGA1O94964 1423 aa23.75■■□□□ 1.39
NDRG1-219ENST00000521544 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
NDRG1-219ENST00000521544 CHD1O14646 1710 aa23.71■■□□□ 1.39
NDRG1-219ENST00000521544 WDR97A6NE52 1622 aa23.7■■□□□ 1.39
NDRG1-219ENST00000521544 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
NDRG1-219ENST00000521544 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
NDRG1-219ENST00000521544 FGD5Q6ZNL6 1462 aa23.66■■□□□ 1.38
NDRG1-219ENST00000521544 CUX1P39880 1505 aa23.64■■□□□ 1.38
NDRG1-219ENST00000521544 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
NDRG1-219ENST00000521544 FBLN2P98095 1184 aa23.63■■□□□ 1.37
NDRG1-219ENST00000521544 MAGI1Q96QZ7 1491 aaPredicted RBP23.59■■□□□ 1.37
NDRG1-219ENST00000521544 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
NDRG1-219ENST00000521544 CLASP1Q7Z460 1538 aa23.56■■□□□ 1.36
NDRG1-219ENST00000521544 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
NDRG1-219ENST00000521544 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
NDRG1-219ENST00000521544 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
NDRG1-219ENST00000521544 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
NDRG1-219ENST00000521544 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
NDRG1-219ENST00000521544 GAPVD1Q14C86 1478 aa23.45■■□□□ 1.34
NDRG1-219ENST00000521544 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
NDRG1-219ENST00000521544 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
NDRG1-219ENST00000521544 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
NDRG1-219ENST00000521544 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
NDRG1-219ENST00000521544 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
NDRG1-219ENST00000521544 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
NDRG1-219ENST00000521544 NUP160Q12769 1436 aa23.24■■□□□ 1.31
NDRG1-219ENST00000521544 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
NDRG1-219ENST00000521544 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
NDRG1-219ENST00000521544 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
NDRG1-219ENST00000521544 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
NDRG1-219ENST00000521544 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
NDRG1-219ENST00000521544 CEP170Q5SW79 1584 aa23.14■■□□□ 1.3
NDRG1-219ENST00000521544 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
NDRG1-219ENST00000521544 ERCC6L2Q5T890 1561 aa23.13■■□□□ 1.29
NDRG1-219ENST00000521544 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
NDRG1-219ENST00000521544 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
NDRG1-219ENST00000521544 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
NDRG1-219ENST00000521544 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms