RNA–Protein interactions for RNA: ENST00000466946.5

ATP11A-209, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 5

Gene ATP11A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-209ENST00000466946 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
ATP11A-209ENST00000466946 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
ATP11A-209ENST00000466946 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
ATP11A-209ENST00000466946 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
ATP11A-209ENST00000466946 NISCHQ9Y2I1 1504 aa17.24■□□□□ 0.35
ATP11A-209ENST00000466946 FOXD1Q16676 465 aa17.08■□□□□ 0.32
ATP11A-209ENST00000466946 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
ATP11A-209ENST00000466946 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
ATP11A-209ENST00000466946 ADRA2BP18089 450 aa16■□□□□ 0.15
ATP11A-209ENST00000466946 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
ATP11A-209ENST00000466946 MSH5O43196 834 aa15.92■□□□□ 0.14
ATP11A-209ENST00000466946 POTEDQ86YR6 584 aa15.45■□□□□ 0.06
ATP11A-209ENST00000466946 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
ATP11A-209ENST00000466946 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
ATP11A-209ENST00000466946 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
ATP11A-209ENST00000466946 DMRT2Q9Y5R5 561 aa14.53□□□□□ -0.08
ATP11A-209ENST00000466946 ABCC9O60706 1549 aa14.47□□□□□ -0.09
ATP11A-209ENST00000466946 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
ATP11A-209ENST00000466946 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
ATP11A-209ENST00000466946 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
ATP11A-209ENST00000466946 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
ATP11A-209ENST00000466946 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
ATP11A-209ENST00000466946 NACADO15069 1562 aa14.09□□□□□ -0.15
ATP11A-209ENST00000466946 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
ATP11A-209ENST00000466946 RB1CC1Q8TDY2 1594 aa14.02□□□□□ -0.16
ATP11A-209ENST00000466946 SHROOM4Q9ULL8 1493 aa14.01□□□□□ -0.17
ATP11A-209ENST00000466946 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
ATP11A-209ENST00000466946 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
ATP11A-209ENST00000466946 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
ATP11A-209ENST00000466946 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
ATP11A-209ENST00000466946 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
ATP11A-209ENST00000466946 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
ATP11A-209ENST00000466946 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
ATP11A-209ENST00000466946 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
ATP11A-209ENST00000466946 BICRAQ9NZM4 1560 aa13.65□□□□□ -0.22
ATP11A-209ENST00000466946 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
ATP11A-209ENST00000466946 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
ATP11A-209ENST00000466946 KCNA4P22459 653 aa13.5□□□□□ -0.25
ATP11A-209ENST00000466946 CECR2Q9BXF3 1484 aa13.45□□□□□ -0.26
ATP11A-209ENST00000466946 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
ATP11A-209ENST00000466946 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
ATP11A-209ENST00000466946 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
ATP11A-209ENST00000466946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.272e-7■■■□□ 15.5
ATP11A-209ENST00000466946 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
ATP11A-209ENST00000466946 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
ATP11A-209ENST00000466946 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
ATP11A-209ENST00000466946 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
ATP11A-209ENST00000466946 WIZO95785 1651 aa13.25□□□□□ -0.29
ATP11A-209ENST00000466946 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
ATP11A-209ENST00000466946 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
ATP11A-209ENST00000466946 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
ATP11A-209ENST00000466946 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
ATP11A-209ENST00000466946 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
ATP11A-209ENST00000466946 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
ATP11A-209ENST00000466946 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
ATP11A-209ENST00000466946 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
ATP11A-209ENST00000466946 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
ATP11A-209ENST00000466946 NCAPD3P42695 1498 aa13□□□□□ -0.33
ATP11A-209ENST00000466946 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
ATP11A-209ENST00000466946 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
ATP11A-209ENST00000466946 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
ATP11A-209ENST00000466946 CAPN15O75808 1086 aa12.9□□□□□ -0.34
ATP11A-209ENST00000466946 DSG3P32926 999 aa12.78□□□□□ -0.36
ATP11A-209ENST00000466946 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
ATP11A-209ENST00000466946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
ATP11A-209ENST00000466946 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
ATP11A-209ENST00000466946 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
ATP11A-209ENST00000466946 APLP2Q06481 763 aa12.71□□□□□ -0.37
ATP11A-209ENST00000466946 CFTRP13569 1480 aa12.67□□□□□ -0.38
ATP11A-209ENST00000466946 NESP48681 1621 aa12.67□□□□□ -0.38
ATP11A-209ENST00000466946 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
ATP11A-209ENST00000466946 PRDM2Q13029 1718 aa12.66□□□□□ -0.38
ATP11A-209ENST00000466946 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
ATP11A-209ENST00000466946 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
ATP11A-209ENST00000466946 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
ATP11A-209ENST00000466946 ABCB7O75027 752 aa12.64□□□□□ -0.39
ATP11A-209ENST00000466946 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
ATP11A-209ENST00000466946 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
ATP11A-209ENST00000466946 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
ATP11A-209ENST00000466946 FANCD2Q9BXW9 1451 aa12.54□□□□□ -0.4
ATP11A-209ENST00000466946 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
ATP11A-209ENST00000466946 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
ATP11A-209ENST00000466946 SYNJ1O43426 1573 aa12.52□□□□□ -0.4
ATP11A-209ENST00000466946 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
ATP11A-209ENST00000466946 CUX1P39880 1505 aa12.48□□□□□ -0.41
ATP11A-209ENST00000466946 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
ATP11A-209ENST00000466946 CEP164Q9UPV0 1460 aa12.46□□□□□ -0.41
ATP11A-209ENST00000466946 TOP2BQ02880 1626 aa12.46□□□□□ -0.41
ATP11A-209ENST00000466946 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
ATP11A-209ENST00000466946 ZBTB22O15209 634 aa12.42□□□□□ -0.42
ATP11A-209ENST00000466946 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
ATP11A-209ENST00000466946 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
ATP11A-209ENST00000466946 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
ATP11A-209ENST00000466946 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
ATP11A-209ENST00000466946 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
ATP11A-209ENST00000466946 POLA2Q14181 598 aa12.37□□□□□ -0.43
ATP11A-209ENST00000466946 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
ATP11A-209ENST00000466946 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
ATP11A-209ENST00000466946 MRC2Q9UBG0 1479 aa12.36□□□□□ -0.43
ATP11A-209ENST00000466946 RUSC2Q8N2Y8 1516 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms