RNA–Protein interactions for RNA: ENST00000522890.5

NDRG1-225, Transcript of N-myc downstream regulated 1, humanhuman

TSL 5

Gene NDRG1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-225ENST00000522890 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
NDRG1-225ENST00000522890 ABCC9O60706 1549 aa36.96■■■■□ 3.51
NDRG1-225ENST00000522890 CCDC180Q9P1Z9 1646 aa36.49■■■■□ 3.43
NDRG1-225ENST00000522890 DNAJC5BQ9UF47 199 aa35.06■■■■□ 3.2
NDRG1-225ENST00000522890 RB1CC1Q8TDY2 1594 aa34.95■■■■□ 3.18
NDRG1-225ENST00000522890 NACADO15069 1562 aa34.57■■■■□ 3.12
NDRG1-225ENST00000522890 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
NDRG1-225ENST00000522890 PABPN1Q86U42 306 aaKnown RBP eCLIP34.33■■■■□ 3.09
NDRG1-225ENST00000522890 UNC13AQ9UPW8 1703 aa34.31■■■■□ 3.08
NDRG1-225ENST00000522890 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
NDRG1-225ENST00000522890 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
NDRG1-225ENST00000522890 CC2D2AQ9P2K1 1620 aa33.38■■■□□ 2.93
NDRG1-225ENST00000522890 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
NDRG1-225ENST00000522890 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
NDRG1-225ENST00000522890 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
NDRG1-225ENST00000522890 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
NDRG1-225ENST00000522890 SCRIBQ14160 1630 aa33.28■■■□□ 2.92
NDRG1-225ENST00000522890 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
NDRG1-225ENST00000522890 DNAJC5Q9H3Z4 198 aa32.49■■■□□ 2.79
NDRG1-225ENST00000522890 CUX2O14529 1486 aa31.97■■■□□ 2.71
NDRG1-225ENST00000522890 ERCC6Q03468 1493 aa31.92■■■□□ 2.7
NDRG1-225ENST00000522890 NCAPD3P42695 1498 aa31.88■■■□□ 2.69
NDRG1-225ENST00000522890 ATAD2BQ9ULI0 1458 aa31.76■■■□□ 2.67
NDRG1-225ENST00000522890 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
NDRG1-225ENST00000522890 SMARCA2P51531 1590 aa31.64■■■□□ 2.66
NDRG1-225ENST00000522890 HMGXB3Q12766 1538 aa31.63■■■□□ 2.65
NDRG1-225ENST00000522890 NESP48681 1621 aa31.63■■■□□ 2.65
NDRG1-225ENST00000522890 BAZ1BQ9UIG0 1483 aaKnown RBP31.44■■■□□ 2.62
NDRG1-225ENST00000522890 THOC2Q8NI27 1593 aaKnown RBP31.41■■■□□ 2.62
NDRG1-225ENST00000522890 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.61
NDRG1-225ENST00000522890 PEG3Q9GZU2 1588 aa31.29■■■□□ 2.6
NDRG1-225ENST00000522890 LAMC3Q9Y6N6 1575 aa31.29■■■□□ 2.6
NDRG1-225ENST00000522890 KIF21AQ7Z4S6 1674 aa31.28■■■□□ 2.6
NDRG1-225ENST00000522890 MROH2BQ7Z745 1585 aa31.15■■■□□ 2.58
NDRG1-225ENST00000522890 PDS5BQ9NTI5 1447 aa31.08■■■□□ 2.57
NDRG1-225ENST00000522890 TRIM41Q8WV44 630 aa30.97■■■□□ 2.55
NDRG1-225ENST00000522890 CADPSQ9ULU8 1353 aa30.9■■■□□ 2.54
NDRG1-225ENST00000522890 MRC2Q9UBG0 1479 aa30.88■■■□□ 2.53
NDRG1-225ENST00000522890 WDR62O43379 1518 aa30.83■■■□□ 2.53
NDRG1-225ENST00000522890 WIZO95785 1651 aa30.82■■■□□ 2.52
NDRG1-225ENST00000522890 CEP164Q9UPV0 1460 aa30.67■■■□□ 2.5
NDRG1-225ENST00000522890 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
NDRG1-225ENST00000522890 CFTRP13569 1480 aa30.45■■■□□ 2.47
NDRG1-225ENST00000522890 OSCARQ8IYS5 282 aa30.44■■■□□ 2.46
NDRG1-225ENST00000522890 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
NDRG1-225ENST00000522890 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
NDRG1-225ENST00000522890 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
NDRG1-225ENST00000522890 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
NDRG1-225ENST00000522890 RIMBP3CA6NJZ7 1639 aa30.19■■■□□ 2.42
NDRG1-225ENST00000522890 RIMBP3BA6NNM3 1639 aa30.19■■■□□ 2.42
NDRG1-225ENST00000522890 RIMBP3Q9UFD9 1639 aa30.19■■■□□ 2.42
NDRG1-225ENST00000522890 ZNF608Q9ULD9 1512 aaPredicted RBP30.1■■■□□ 2.41
NDRG1-225ENST00000522890 IFT140Q96RY7 1462 aa30.05■■■□□ 2.4
NDRG1-225ENST00000522890 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
NDRG1-225ENST00000522890 CCDC88BA6NC98 1476 aa29.98■■■□□ 2.39
NDRG1-225ENST00000522890 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
NDRG1-225ENST00000522890 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
NDRG1-225ENST00000522890 CHD1O14646 1710 aa29.88■■■□□ 2.37
NDRG1-225ENST00000522890 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
NDRG1-225ENST00000522890 DNMBPQ6XZF7 1577 aa29.82■■■□□ 2.36
NDRG1-225ENST00000522890 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
NDRG1-225ENST00000522890 TARBP1Q13395 1621 aaKnown RBP29.76■■■□□ 2.35
NDRG1-225ENST00000522890 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.353e-8■■■■□ 26.3
NDRG1-225ENST00000522890 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
NDRG1-225ENST00000522890 FBLN2P98095 1184 aa29.67■■■□□ 2.34
NDRG1-225ENST00000522890 TRHP20396 242 aaPredicted RBP29.65■■■□□ 2.34
NDRG1-225ENST00000522890 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
NDRG1-225ENST00000522890 RAD54L2Q9Y4B4 1467 aa29.56■■■□□ 2.32
NDRG1-225ENST00000522890 TDRD9Q8NDG6 1382 aaKnown RBP29.5■■■□□ 2.31
NDRG1-225ENST00000522890 SOGA1O94964 1423 aa29.46■■■□□ 2.31
NDRG1-225ENST00000522890 SNAPC4Q5SXM2 1469 aa29.44■■■□□ 2.3
NDRG1-225ENST00000522890 CLASP1Q7Z460 1538 aa29.41■■■□□ 2.3
NDRG1-225ENST00000522890 FGD5Q6ZNL6 1462 aa29.39■■■□□ 2.3
NDRG1-225ENST00000522890 WDR97A6NE52 1622 aa29.37■■■□□ 2.29
NDRG1-225ENST00000522890 SYNJ1O43426 1573 aa29.36■■■□□ 2.29
NDRG1-225ENST00000522890 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
NDRG1-225ENST00000522890 MAGI1Q96QZ7 1491 aaPredicted RBP29.3■■■□□ 2.28
NDRG1-225ENST00000522890 CUX1P39880 1505 aa29.3■■■□□ 2.28
NDRG1-225ENST00000522890 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
NDRG1-225ENST00000522890 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
NDRG1-225ENST00000522890 SYNJ2O15056 1496 aa29.22■■■□□ 2.27
NDRG1-225ENST00000522890 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
NDRG1-225ENST00000522890 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
NDRG1-225ENST00000522890 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
NDRG1-225ENST00000522890 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
NDRG1-225ENST00000522890 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
NDRG1-225ENST00000522890 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
NDRG1-225ENST00000522890 ADAMTS12P58397 1594 aa28.86■■■□□ 2.21
NDRG1-225ENST00000522890 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
NDRG1-225ENST00000522890 NUP160Q12769 1436 aa28.8■■■□□ 2.2
NDRG1-225ENST00000522890 SHROOM2Q13796 1616 aa28.77■■■□□ 2.2
NDRG1-225ENST00000522890 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
NDRG1-225ENST00000522890 KIF13AQ9H1H9 1805 aa28.75■■■□□ 2.19
NDRG1-225ENST00000522890 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
NDRG1-225ENST00000522890 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
NDRG1-225ENST00000522890 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
NDRG1-225ENST00000522890 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
NDRG1-225ENST00000522890 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
NDRG1-225ENST00000522890 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
NDRG1-225ENST00000522890 JPH4Q96JJ6 628 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms