RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
TMEM56-201ENST00000370203 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
TMEM56-201ENST00000370203 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
TMEM56-201ENST00000370203 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
TMEM56-201ENST00000370203 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
TMEM56-201ENST00000370203 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
TMEM56-201ENST00000370203 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
TMEM56-201ENST00000370203 APLP2Q06481 763 aa19.82■□□□□ 0.76
TMEM56-201ENST00000370203 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
TMEM56-201ENST00000370203 NISCHQ9Y2I1 1504 aa19.65■□□□□ 0.74
TMEM56-201ENST00000370203 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
TMEM56-201ENST00000370203 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
TMEM56-201ENST00000370203 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
TMEM56-201ENST00000370203 ERICH6Q7L0X2 663 aa19.2■□□□□ 0.66
TMEM56-201ENST00000370203 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
TMEM56-201ENST00000370203 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
TMEM56-201ENST00000370203 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
TMEM56-201ENST00000370203 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
TMEM56-201ENST00000370203 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
TMEM56-201ENST00000370203 CNGB1Q14028 1251 aaPredicted RBP18.99■□□□□ 0.63
TMEM56-201ENST00000370203 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
TMEM56-201ENST00000370203 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
TMEM56-201ENST00000370203 ITGAEP38570 1179 aa18.89■□□□□ 0.61
TMEM56-201ENST00000370203 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
TMEM56-201ENST00000370203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
TMEM56-201ENST00000370203 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.6
TMEM56-201ENST00000370203 NEFLP07196 543 aa18.69■□□□□ 0.58
TMEM56-201ENST00000370203 MYT1Q01538 1121 aa18.69■□□□□ 0.58
TMEM56-201ENST00000370203 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
TMEM56-201ENST00000370203 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
TMEM56-201ENST00000370203 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
TMEM56-201ENST00000370203 DAXXQ9UER7 740 aaPredicted RBP18.34■□□□□ 0.53
TMEM56-201ENST00000370203 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
TMEM56-201ENST00000370203 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
TMEM56-201ENST00000370203 FAM50AQ14320 339 aaKnown RBP18.16■□□□□ 0.5
TMEM56-201ENST00000370203 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM56-201ENST00000370203 HRCP23327 699 aa18.12■□□□□ 0.49
TMEM56-201ENST00000370203 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
TMEM56-201ENST00000370203 NEUROD1Q13562 356 aa18.1■□□□□ 0.49
TMEM56-201ENST00000370203 TRIM52Q96A61 297 aa18.09■□□□□ 0.49
TMEM56-201ENST00000370203 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
TMEM56-201ENST00000370203 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
TMEM56-201ENST00000370203 ARID3CA6NKF2 412 aa18.07■□□□□ 0.48
TMEM56-201ENST00000370203 FBLN2P98095 1184 aa18.07■□□□□ 0.48
TMEM56-201ENST00000370203 BCANQ96GW7 911 aa18.02■□□□□ 0.47
TMEM56-201ENST00000370203 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
TMEM56-201ENST00000370203 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
TMEM56-201ENST00000370203 P3H3Q8IVL6 736 aa17.84■□□□□ 0.45
TMEM56-201ENST00000370203 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
TMEM56-201ENST00000370203 ABCC9O60706 1549 aa17.8■□□□□ 0.44
TMEM56-201ENST00000370203 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
TMEM56-201ENST00000370203 ZNF777Q9ULD5 760 aaPredicted RBP17.69■□□□□ 0.42
TMEM56-201ENST00000370203 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
TMEM56-201ENST00000370203 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
TMEM56-201ENST00000370203 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
TMEM56-201ENST00000370203 PLEKHG5O94827 1062 aa17.55■□□□□ 0.4
TMEM56-201ENST00000370203 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
TMEM56-201ENST00000370203 ANP32CO43423 234 aa17.54■□□□□ 0.4
TMEM56-201ENST00000370203 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
TMEM56-201ENST00000370203 NPM2Q86SE8 214 aaKnown RBP17.5■□□□□ 0.39
TMEM56-201ENST00000370203 SALL2Q9Y467 1007 aaPredicted RBP17.46■□□□□ 0.39
TMEM56-201ENST00000370203 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
TMEM56-201ENST00000370203 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
TMEM56-201ENST00000370203 NEFMP07197 916 aa17.4■□□□□ 0.38
TMEM56-201ENST00000370203 A0A0G2JS52 829 aa17.4■□□□□ 0.38
TMEM56-201ENST00000370203 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.38
TMEM56-201ENST00000370203 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
TMEM56-201ENST00000370203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.37
TMEM56-201ENST00000370203 ZBTB7CA1YPR0 619 aa17.32■□□□□ 0.36
TMEM56-201ENST00000370203 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
TMEM56-201ENST00000370203 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
TMEM56-201ENST00000370203 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
TMEM56-201ENST00000370203 ARXQ96QS3 562 aa17.23■□□□□ 0.35
TMEM56-201ENST00000370203 KDM2AQ9Y2K7 1162 aa17.18■□□□□ 0.34
TMEM56-201ENST00000370203 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
TMEM56-201ENST00000370203 FKBP8Q14318 412 aa17.14■□□□□ 0.33
TMEM56-201ENST00000370203 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
TMEM56-201ENST00000370203 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
TMEM56-201ENST00000370203 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
TMEM56-201ENST00000370203 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMEM56-201ENST00000370203 ANP32AP39687 249 aaKnown RBP17.1■□□□□ 0.33
TMEM56-201ENST00000370203 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
TMEM56-201ENST00000370203 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.33
TMEM56-201ENST00000370203 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
TMEM56-201ENST00000370203 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
TMEM56-201ENST00000370203 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
TMEM56-201ENST00000370203 NBR1Q14596 966 aa17.01■□□□□ 0.31
TMEM56-201ENST00000370203 KCNH8Q96L42 1107 aa17■□□□□ 0.31
TMEM56-201ENST00000370203 TPRNQ4KMQ1 711 aa16.97■□□□□ 0.31
TMEM56-201ENST00000370203 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
TMEM56-201ENST00000370203 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
TMEM56-201ENST00000370203 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
TMEM56-201ENST00000370203 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
TMEM56-201ENST00000370203 TAOK2Q9UL54 1235 aa16.92■□□□□ 0.3
TMEM56-201ENST00000370203 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
TMEM56-201ENST00000370203 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
TMEM56-201ENST00000370203 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
TMEM56-201ENST00000370203 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
TMEM56-201ENST00000370203 ANP32BQ92688 251 aaKnown RBP16.87■□□□□ 0.29
TMEM56-201ENST00000370203 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms