RNA–Protein interactions for RNA: ENST00000636712.1

SERPINA1-220, Transcript of serpin family A member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SERPINA1, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-220ENST00000636712 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
SERPINA1-220ENST00000636712 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
SERPINA1-220ENST00000636712 ABCC9O60706 1549 aa25.9■■□□□ 1.74
SERPINA1-220ENST00000636712 ZCCHC6Q5VYS8 1495 aaKnown RBP25.43■■□□□ 1.66
SERPINA1-220ENST00000636712 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
SERPINA1-220ENST00000636712 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
SERPINA1-220ENST00000636712 NACADO15069 1562 aa25.19■■□□□ 1.62
SERPINA1-220ENST00000636712 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
SERPINA1-220ENST00000636712 RB1CC1Q8TDY2 1594 aa25.1■■□□□ 1.61
SERPINA1-220ENST00000636712 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
SERPINA1-220ENST00000636712 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
SERPINA1-220ENST00000636712 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
SERPINA1-220ENST00000636712 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
SERPINA1-220ENST00000636712 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
SERPINA1-220ENST00000636712 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
SERPINA1-220ENST00000636712 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
SERPINA1-220ENST00000636712 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
SERPINA1-220ENST00000636712 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
SERPINA1-220ENST00000636712 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
SERPINA1-220ENST00000636712 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
SERPINA1-220ENST00000636712 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
SERPINA1-220ENST00000636712 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
SERPINA1-220ENST00000636712 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
SERPINA1-220ENST00000636712 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
SERPINA1-220ENST00000636712 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
SERPINA1-220ENST00000636712 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
SERPINA1-220ENST00000636712 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
SERPINA1-220ENST00000636712 WIZO95785 1651 aa23.14■■□□□ 1.3
SERPINA1-220ENST00000636712 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
SERPINA1-220ENST00000636712 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
SERPINA1-220ENST00000636712 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
SERPINA1-220ENST00000636712 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
SERPINA1-220ENST00000636712 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
SERPINA1-220ENST00000636712 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
SERPINA1-220ENST00000636712 CFTRP13569 1480 aa22.54■■□□□ 1.2
SERPINA1-220ENST00000636712 NESP48681 1621 aa22.52■■□□□ 1.2
SERPINA1-220ENST00000636712 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
SERPINA1-220ENST00000636712 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
SERPINA1-220ENST00000636712 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
SERPINA1-220ENST00000636712 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
SERPINA1-220ENST00000636712 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
SERPINA1-220ENST00000636712 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
SERPINA1-220ENST00000636712 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
SERPINA1-220ENST00000636712 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
SERPINA1-220ENST00000636712 WDR62O43379 1518 aa22.06■■□□□ 1.12
SERPINA1-220ENST00000636712 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
SERPINA1-220ENST00000636712 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
SERPINA1-220ENST00000636712 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
SERPINA1-220ENST00000636712 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
SERPINA1-220ENST00000636712 CUX2O14529 1486 aa21.98■■□□□ 1.11
SERPINA1-220ENST00000636712 WRNQ14191 1432 aaPredicted RBP eCLIP21.98■■□□□ 1.11
SERPINA1-220ENST00000636712 CUX1P39880 1505 aa21.96■■□□□ 1.11
SERPINA1-220ENST00000636712 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
SERPINA1-220ENST00000636712 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
SERPINA1-220ENST00000636712 POLA1P09884 1462 aaPredicted RBP21.84■■□□□ 1.09
SERPINA1-220ENST00000636712 BIVM-ERCC5R4GMW8 1640 aa21.83■■□□□ 1.09
SERPINA1-220ENST00000636712 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.08
SERPINA1-220ENST00000636712 IFT140Q96RY7 1462 aa21.79■■□□□ 1.08
SERPINA1-220ENST00000636712 SOGA1O94964 1423 aa21.76■■□□□ 1.07
SERPINA1-220ENST00000636712 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
SERPINA1-220ENST00000636712 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
SERPINA1-220ENST00000636712 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
SERPINA1-220ENST00000636712 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
SERPINA1-220ENST00000636712 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
SERPINA1-220ENST00000636712 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
SERPINA1-220ENST00000636712 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
SERPINA1-220ENST00000636712 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
SERPINA1-220ENST00000636712 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.041e-14■■■■□ 19.5
SERPINA1-220ENST00000636712 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
SERPINA1-220ENST00000636712 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
SERPINA1-220ENST00000636712 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
SERPINA1-220ENST00000636712 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
SERPINA1-220ENST00000636712 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
SERPINA1-220ENST00000636712 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
SERPINA1-220ENST00000636712 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
SERPINA1-220ENST00000636712 IGF1RP08069 1367 aa21.38■■□□□ 1.01
SERPINA1-220ENST00000636712 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
SERPINA1-220ENST00000636712 EEA1Q15075 1411 aa21.36■■□□□ 1.01
SERPINA1-220ENST00000636712 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
SERPINA1-220ENST00000636712 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
SERPINA1-220ENST00000636712 FHAD1B1AJZ9 1412 aa21.3■■□□□ 1
SERPINA1-220ENST00000636712 SYNJ2O15056 1496 aa21.3■■□□□ 1
SERPINA1-220ENST00000636712 ADAMTS12P58397 1594 aa21.28■■□□□ 1
SERPINA1-220ENST00000636712 CUL7Q14999 1698 aa21.25■□□□□ 0.99
SERPINA1-220ENST00000636712 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
SERPINA1-220ENST00000636712 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
SERPINA1-220ENST00000636712 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
SERPINA1-220ENST00000636712 FBLN2P98095 1184 aa21.2■□□□□ 0.98
SERPINA1-220ENST00000636712 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
SERPINA1-220ENST00000636712 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
SERPINA1-220ENST00000636712 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
SERPINA1-220ENST00000636712 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
SERPINA1-220ENST00000636712 CHD1O14646 1710 aa21.14■□□□□ 0.97
SERPINA1-220ENST00000636712 OSCARQ8IYS5 282 aa21.13■□□□□ 0.97
SERPINA1-220ENST00000636712 NUP160Q12769 1436 aa21.1■□□□□ 0.97
SERPINA1-220ENST00000636712 KIF21BO75037 1637 aa21.06■□□□□ 0.96
SERPINA1-220ENST00000636712 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
SERPINA1-220ENST00000636712 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
SERPINA1-220ENST00000636712 KIAA0586Q9BVV6 1533 aa20.98■□□□□ 0.95
SERPINA1-220ENST00000636712 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms