RNA–Protein interactions for RNA: ENST00000518480.5

NDRG1-210, Transcript of N-myc downstream regulated 1, humanhuman

TSL 4

Gene NDRG1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-210ENST00000518480 NISCHQ9Y2I1 1504 aa37.27■■■■□ 3.56
NDRG1-210ENST00000518480 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
NDRG1-210ENST00000518480 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
NDRG1-210ENST00000518480 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
NDRG1-210ENST00000518480 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
NDRG1-210ENST00000518480 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
NDRG1-210ENST00000518480 NACADO15069 1562 aa30.28■■■□□ 2.44
NDRG1-210ENST00000518480 ABCC9O60706 1549 aa30.27■■■□□ 2.44
NDRG1-210ENST00000518480 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
NDRG1-210ENST00000518480 RB1CC1Q8TDY2 1594 aa29.92■■■□□ 2.38
NDRG1-210ENST00000518480 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
NDRG1-210ENST00000518480 UNC13AQ9UPW8 1703 aa29.25■■■□□ 2.27
NDRG1-210ENST00000518480 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
NDRG1-210ENST00000518480 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
NDRG1-210ENST00000518480 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
NDRG1-210ENST00000518480 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
NDRG1-210ENST00000518480 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
NDRG1-210ENST00000518480 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
NDRG1-210ENST00000518480 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
NDRG1-210ENST00000518480 WIZO95785 1651 aa28.46■■■□□ 2.15
NDRG1-210ENST00000518480 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
NDRG1-210ENST00000518480 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
NDRG1-210ENST00000518480 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
NDRG1-210ENST00000518480 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
NDRG1-210ENST00000518480 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
NDRG1-210ENST00000518480 ATAD2BQ9ULI0 1458 aa28.07■■■□□ 2.08
NDRG1-210ENST00000518480 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
NDRG1-210ENST00000518480 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
NDRG1-210ENST00000518480 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
NDRG1-210ENST00000518480 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
NDRG1-210ENST00000518480 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
NDRG1-210ENST00000518480 DNAJC5BQ9UF47 199 aa27.72■■■□□ 2.03
NDRG1-210ENST00000518480 CC2D2AQ9P2K1 1620 aa27.53■■■□□ 2
NDRG1-210ENST00000518480 TRIM41Q8WV44 630 aa27.52■■■□□ 2
NDRG1-210ENST00000518480 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
NDRG1-210ENST00000518480 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
NDRG1-210ENST00000518480 CFTRP13569 1480 aa27.28■■□□□ 1.96
NDRG1-210ENST00000518480 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
NDRG1-210ENST00000518480 EEA1Q15075 1411 aa27.12■■□□□ 1.93
NDRG1-210ENST00000518480 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
NDRG1-210ENST00000518480 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
NDRG1-210ENST00000518480 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
NDRG1-210ENST00000518480 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
NDRG1-210ENST00000518480 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
NDRG1-210ENST00000518480 CUX1P39880 1505 aa26.85■■□□□ 1.89
NDRG1-210ENST00000518480 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
NDRG1-210ENST00000518480 SOGA1O94964 1423 aa26.81■■□□□ 1.88
NDRG1-210ENST00000518480 FAM9AQ8IZU1 332 aaPredicted RBP26.78■■□□□ 1.88
NDRG1-210ENST00000518480 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
NDRG1-210ENST00000518480 CSRNP3Q8WYN3 585 aa26.71■■□□□ 1.87
NDRG1-210ENST00000518480 KIF21BO75037 1637 aa26.7■■□□□ 1.86
NDRG1-210ENST00000518480 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
NDRG1-210ENST00000518480 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
NDRG1-210ENST00000518480 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.85
NDRG1-210ENST00000518480 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
NDRG1-210ENST00000518480 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
NDRG1-210ENST00000518480 NESP48681 1621 aa26.62■■□□□ 1.85
NDRG1-210ENST00000518480 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
NDRG1-210ENST00000518480 TNIKQ9UKE5 1360 aa26.57■■□□□ 1.84
NDRG1-210ENST00000518480 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
NDRG1-210ENST00000518480 FGD5Q6ZNL6 1462 aa26.52■■□□□ 1.84
NDRG1-210ENST00000518480 TOPBP1Q92547 1522 aa26.52■■□□□ 1.84
NDRG1-210ENST00000518480 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
NDRG1-210ENST00000518480 PRXQ9BXM0 1461 aa26.44■■□□□ 1.82
NDRG1-210ENST00000518480 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
NDRG1-210ENST00000518480 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.82
NDRG1-210ENST00000518480 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
NDRG1-210ENST00000518480 CUX2O14529 1486 aa26.36■■□□□ 1.81
NDRG1-210ENST00000518480 CEP162Q5TB80 1403 aa26.36■■□□□ 1.81
NDRG1-210ENST00000518480 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
NDRG1-210ENST00000518480 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
NDRG1-210ENST00000518480 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
NDRG1-210ENST00000518480 UBTFP17480 764 aaKnown RBP26.28■■□□□ 1.8
NDRG1-210ENST00000518480 IGF1RP08069 1367 aa26.23■■□□□ 1.79
NDRG1-210ENST00000518480 EHMT2Q96KQ7 1210 aa26.21■■□□□ 1.79
NDRG1-210ENST00000518480 CUL7Q14999 1698 aa26.21■■□□□ 1.79
NDRG1-210ENST00000518480 WDR62O43379 1518 aa26.19■■□□□ 1.78
NDRG1-210ENST00000518480 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
NDRG1-210ENST00000518480 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
NDRG1-210ENST00000518480 TARBP1Q13395 1621 aaKnown RBP26.16■■□□□ 1.78
NDRG1-210ENST00000518480 CLIP1P30622 1438 aa26.13■■□□□ 1.77
NDRG1-210ENST00000518480 CARMIL1Q5VZK9 1371 aa26.11■■□□□ 1.77
NDRG1-210ENST00000518480 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
NDRG1-210ENST00000518480 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
NDRG1-210ENST00000518480 ERCC6Q03468 1493 aa26.03■■□□□ 1.76
NDRG1-210ENST00000518480 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
NDRG1-210ENST00000518480 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
NDRG1-210ENST00000518480 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
NDRG1-210ENST00000518480 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
NDRG1-210ENST00000518480 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
NDRG1-210ENST00000518480 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
NDRG1-210ENST00000518480 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
NDRG1-210ENST00000518480 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
NDRG1-210ENST00000518480 ARAP1Q96P48 1450 aa25.84■■□□□ 1.73
NDRG1-210ENST00000518480 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.72
NDRG1-210ENST00000518480 ADAMTS12P58397 1594 aa25.81■■□□□ 1.72
NDRG1-210ENST00000518480 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
NDRG1-210ENST00000518480 ARHGAP35Q9NRY4 1499 aa25.8■■□□□ 1.72
NDRG1-210ENST00000518480 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
NDRG1-210ENST00000518480 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.713e-8■■■■■ 26.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms