RNA–Protein interactions for RNA: ENST00000449399.7

SERPINA1-209, Transcript of serpin family A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERPINA1, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-209ENST00000449399 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
SERPINA1-209ENST00000449399 CCDC180Q9P1Z9 1646 aa29.59■■■□□ 2.33
SERPINA1-209ENST00000449399 ABCC9O60706 1549 aa29.52■■■□□ 2.32
SERPINA1-209ENST00000449399 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
SERPINA1-209ENST00000449399 NACADO15069 1562 aa27.89■■■□□ 2.06
SERPINA1-209ENST00000449399 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
SERPINA1-209ENST00000449399 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
SERPINA1-209ENST00000449399 DNAJC5BQ9UF47 199 aa27.6■■■□□ 2.01
SERPINA1-209ENST00000449399 MYO15BQ96JP2 1530 aa27.47■■□□□ 1.99
SERPINA1-209ENST00000449399 PABPN1Q86U42 306 aaKnown RBP eCLIP27.42■■□□□ 1.98
SERPINA1-209ENST00000449399 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
SERPINA1-209ENST00000449399 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
SERPINA1-209ENST00000449399 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
SERPINA1-209ENST00000449399 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
SERPINA1-209ENST00000449399 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
SERPINA1-209ENST00000449399 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
SERPINA1-209ENST00000449399 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
SERPINA1-209ENST00000449399 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
SERPINA1-209ENST00000449399 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
SERPINA1-209ENST00000449399 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
SERPINA1-209ENST00000449399 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
SERPINA1-209ENST00000449399 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
SERPINA1-209ENST00000449399 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
SERPINA1-209ENST00000449399 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
SERPINA1-209ENST00000449399 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
SERPINA1-209ENST00000449399 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
SERPINA1-209ENST00000449399 CUX2O14529 1486 aa25.43■■□□□ 1.66
SERPINA1-209ENST00000449399 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
SERPINA1-209ENST00000449399 NESP48681 1621 aa25.37■■□□□ 1.65
SERPINA1-209ENST00000449399 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
SERPINA1-209ENST00000449399 DNAJC5Q9H3Z4 198 aa25.31■■□□□ 1.64
SERPINA1-209ENST00000449399 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
SERPINA1-209ENST00000449399 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
SERPINA1-209ENST00000449399 KIF21AQ7Z4S6 1674 aa25.14■■□□□ 1.62
SERPINA1-209ENST00000449399 WIZO95785 1651 aa25.09■■□□□ 1.61
SERPINA1-209ENST00000449399 PDS5BQ9NTI5 1447 aa24.98■■□□□ 1.59
SERPINA1-209ENST00000449399 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
SERPINA1-209ENST00000449399 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
SERPINA1-209ENST00000449399 WDR62O43379 1518 aa24.79■■□□□ 1.56
SERPINA1-209ENST00000449399 RSF1Q96T23 1441 aaPredicted RBP24.76■■□□□ 1.55
SERPINA1-209ENST00000449399 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
SERPINA1-209ENST00000449399 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
SERPINA1-209ENST00000449399 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
SERPINA1-209ENST00000449399 CFTRP13569 1480 aa24.65■■□□□ 1.54
SERPINA1-209ENST00000449399 PRDM2Q13029 1718 aa24.59■■□□□ 1.53
SERPINA1-209ENST00000449399 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
SERPINA1-209ENST00000449399 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
SERPINA1-209ENST00000449399 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
SERPINA1-209ENST00000449399 TOPBP1Q92547 1522 aa24.23■■□□□ 1.47
SERPINA1-209ENST00000449399 IFT140Q96RY7 1462 aa24.2■■□□□ 1.46
SERPINA1-209ENST00000449399 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
SERPINA1-209ENST00000449399 DNMBPQ6XZF7 1577 aa24.17■■□□□ 1.46
SERPINA1-209ENST00000449399 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
SERPINA1-209ENST00000449399 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.46
SERPINA1-209ENST00000449399 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
SERPINA1-209ENST00000449399 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
SERPINA1-209ENST00000449399 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
SERPINA1-209ENST00000449399 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
SERPINA1-209ENST00000449399 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
SERPINA1-209ENST00000449399 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
SERPINA1-209ENST00000449399 CHD1O14646 1710 aa23.99■■□□□ 1.43
SERPINA1-209ENST00000449399 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.421e-14■■■■□ 19.5
SERPINA1-209ENST00000449399 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
SERPINA1-209ENST00000449399 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
SERPINA1-209ENST00000449399 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
SERPINA1-209ENST00000449399 CUX1P39880 1505 aa23.82■■□□□ 1.4
SERPINA1-209ENST00000449399 SOGA1O94964 1423 aa23.81■■□□□ 1.4
SERPINA1-209ENST00000449399 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
SERPINA1-209ENST00000449399 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
SERPINA1-209ENST00000449399 FBLN2P98095 1184 aa23.76■■□□□ 1.39
SERPINA1-209ENST00000449399 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
SERPINA1-209ENST00000449399 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
SERPINA1-209ENST00000449399 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
SERPINA1-209ENST00000449399 MAGI1Q96QZ7 1491 aaPredicted RBP23.65■■□□□ 1.38
SERPINA1-209ENST00000449399 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
SERPINA1-209ENST00000449399 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
SERPINA1-209ENST00000449399 GRIN2BQ13224 1484 aa23.64■■□□□ 1.37
SERPINA1-209ENST00000449399 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
SERPINA1-209ENST00000449399 SYNJ1O43426 1573 aa23.62■■□□□ 1.37
SERPINA1-209ENST00000449399 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
SERPINA1-209ENST00000449399 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
SERPINA1-209ENST00000449399 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
SERPINA1-209ENST00000449399 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
SERPINA1-209ENST00000449399 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
SERPINA1-209ENST00000449399 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
SERPINA1-209ENST00000449399 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
SERPINA1-209ENST00000449399 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
SERPINA1-209ENST00000449399 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
SERPINA1-209ENST00000449399 TRHP20396 242 aaPredicted RBP23.39■■□□□ 1.33
SERPINA1-209ENST00000449399 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
SERPINA1-209ENST00000449399 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
SERPINA1-209ENST00000449399 ERCC6L2Q5T890 1561 aa23.28■■□□□ 1.32
SERPINA1-209ENST00000449399 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
SERPINA1-209ENST00000449399 NUP160Q12769 1436 aa23.26■■□□□ 1.31
SERPINA1-209ENST00000449399 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
SERPINA1-209ENST00000449399 SHROOM2Q13796 1616 aa23.22■■□□□ 1.31
SERPINA1-209ENST00000449399 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
SERPINA1-209ENST00000449399 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
SERPINA1-209ENST00000449399 CUL7Q14999 1698 aa22.98■■□□□ 1.27
SERPINA1-209ENST00000449399 KIF13AQ9H1H9 1805 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms