RNA–Protein interactions for RNA: ENST00000498611.5

TUBGCP6-208, Transcript of tubulin gamma complex associated protein 6, humanhuman

TSL 1 (best)

Gene TUBGCP6, Length 5,274 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6-208ENST00000498611 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.5
TUBGCP6-208ENST00000498611 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
TUBGCP6-208ENST00000498611 FAM9AQ8IZU1 332 aaPredicted RBP28.24■■■□□ 2.11
TUBGCP6-208ENST00000498611 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
TUBGCP6-208ENST00000498611 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
TUBGCP6-208ENST00000498611 APLP2Q06481 763 aa27.39■■□□□ 1.97
TUBGCP6-208ENST00000498611 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
TUBGCP6-208ENST00000498611 ATP1B4Q9UN42 357 aaPredicted RBP26.47■■□□□ 1.83
TUBGCP6-208ENST00000498611 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
TUBGCP6-208ENST00000498611 MYT1LQ9UL68 1186 aa26.19■■□□□ 1.78
TUBGCP6-208ENST00000498611 TRIM41Q8WV44 630 aa26.14■■□□□ 1.77
TUBGCP6-208ENST00000498611 PELP1Q8IZL8 1130 aaKnown RBP26.07■■□□□ 1.76
TUBGCP6-208ENST00000498611 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
TUBGCP6-208ENST00000498611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
TUBGCP6-208ENST00000498611 HNRNPUL2Q1KMD3 747 aaKnown RBP25.96■■□□□ 1.75
TUBGCP6-208ENST00000498611 ABCC9O60706 1549 aa25.79■■□□□ 1.72
TUBGCP6-208ENST00000498611 TTBK1Q5TCY1 1321 aaPredicted RBP25.78■■□□□ 1.72
TUBGCP6-208ENST00000498611 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.681e-6■■■□□ 16
TUBGCP6-208ENST00000498611 PCGF6Q9BYE7 350 aa25.26■■□□□ 1.63
TUBGCP6-208ENST00000498611 FBLN2P98095 1184 aa25.25■■□□□ 1.63
TUBGCP6-208ENST00000498611 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
TUBGCP6-208ENST00000498611 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
TUBGCP6-208ENST00000498611 MYT1Q01538 1121 aa25.13■■□□□ 1.61
TUBGCP6-208ENST00000498611 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
TUBGCP6-208ENST00000498611 NPM1P06748 294 aaKnown RBP eCLIP24.98■■□□□ 1.59
TUBGCP6-208ENST00000498611 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
TUBGCP6-208ENST00000498611 SLC4A1APQ9BWU0 796 aaKnown RBP24.9■■□□□ 1.58
TUBGCP6-208ENST00000498611 ITGAEP38570 1179 aa24.89■■□□□ 1.58
TUBGCP6-208ENST00000498611 CENPBP07199 599 aaPredicted RBP24.83■■□□□ 1.57
TUBGCP6-208ENST00000498611 HRCP23327 699 aa24.8■■□□□ 1.56
TUBGCP6-208ENST00000498611 POLR3GLQ9BT43 218 aa24.8■■□□□ 1.56
TUBGCP6-208ENST00000498611 NEFLP07196 543 aa24.74■■□□□ 1.55
TUBGCP6-208ENST00000498611 BCANQ96GW7 911 aa24.73■■□□□ 1.55
TUBGCP6-208ENST00000498611 CDK11AQ9UQ88 783 aaPredicted RBP24.65■■□□□ 1.54
TUBGCP6-208ENST00000498611 ERICH6Q7L0X2 663 aa24.6■■□□□ 1.53
TUBGCP6-208ENST00000498611 TRIM52Q96A61 297 aa24.54■■□□□ 1.52
TUBGCP6-208ENST00000498611 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
TUBGCP6-208ENST00000498611 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.5
TUBGCP6-208ENST00000498611 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.5
TUBGCP6-208ENST00000498611 TRIM26Q12899 539 aaPredicted RBP24.32■■□□□ 1.48
TUBGCP6-208ENST00000498611 NEFMP07197 916 aa24.28■■□□□ 1.48
TUBGCP6-208ENST00000498611 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
TUBGCP6-208ENST00000498611 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
TUBGCP6-208ENST00000498611 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
TUBGCP6-208ENST00000498611 ZNF777Q9ULD5 760 aaPredicted RBP24.19■■□□□ 1.46
TUBGCP6-208ENST00000498611 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
TUBGCP6-208ENST00000498611 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
TUBGCP6-208ENST00000498611 CNGB1Q14028 1251 aaPredicted RBP24.12■■□□□ 1.45
TUBGCP6-208ENST00000498611 ARID3CA6NKF2 412 aa24.12■■□□□ 1.45
TUBGCP6-208ENST00000498611 SLC24A1O60721 1099 aa24.1■■□□□ 1.45
TUBGCP6-208ENST00000498611 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
TUBGCP6-208ENST00000498611 ZBTB47Q9UFB7 747 aaPredicted RBP24.06■■□□□ 1.44
TUBGCP6-208ENST00000498611 ZNF326Q5BKZ1 582 aaKnown RBP24.06■■□□□ 1.44
TUBGCP6-208ENST00000498611 CHGAP10645 457 aaKnown RBP24.01■■□□□ 1.43
TUBGCP6-208ENST00000498611 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
TUBGCP6-208ENST00000498611 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
TUBGCP6-208ENST00000498611 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
TUBGCP6-208ENST00000498611 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
TUBGCP6-208ENST00000498611 CLSPNQ9HAW4 1339 aa23.85■■□□□ 1.41
TUBGCP6-208ENST00000498611 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
TUBGCP6-208ENST00000498611 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
TUBGCP6-208ENST00000498611 TSPY4P0CV99 314 aa23.84■■□□□ 1.41
TUBGCP6-208ENST00000498611 TSPY10P0CW01 314 aa23.84■■□□□ 1.41
TUBGCP6-208ENST00000498611 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
TUBGCP6-208ENST00000498611 NEUROD1Q13562 356 aa23.81■■□□□ 1.4
TUBGCP6-208ENST00000498611 C14orf37Q86TY3 774 aa23.74■■□□□ 1.39
TUBGCP6-208ENST00000498611 PPP1R15AO75807 674 aaPredicted RBP23.71■■□□□ 1.39
TUBGCP6-208ENST00000498611 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
TUBGCP6-208ENST00000498611 NACADO15069 1562 aa23.69■■□□□ 1.38
TUBGCP6-208ENST00000498611 NPM2Q86SE8 214 aaKnown RBP23.69■■□□□ 1.38
TUBGCP6-208ENST00000498611 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
TUBGCP6-208ENST00000498611 HAP1P54257 671 aaPredicted RBP23.62■■□□□ 1.37
TUBGCP6-208ENST00000498611 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
TUBGCP6-208ENST00000498611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.375e-7■■■□□ 15.9
TUBGCP6-208ENST00000498611 CANXP27824 592 aaKnown RBP23.59■■□□□ 1.37
TUBGCP6-208ENST00000498611 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
TUBGCP6-208ENST00000498611 A0A0G2JS52 829 aa23.53■■□□□ 1.36
TUBGCP6-208ENST00000498611 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
TUBGCP6-208ENST00000498611 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
TUBGCP6-208ENST00000498611 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
TUBGCP6-208ENST00000498611 ANP32CO43423 234 aa23.48■■□□□ 1.35
TUBGCP6-208ENST00000498611 MTUS2Q5JR59 1369 aa23.48■■□□□ 1.35
TUBGCP6-208ENST00000498611 ZNF316A6NFI3 1004 aaPredicted RBP23.46■■□□□ 1.35
TUBGCP6-208ENST00000498611 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.34
TUBGCP6-208ENST00000498611 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
TUBGCP6-208ENST00000498611 RSF1Q96T23 1441 aaPredicted RBP23.35■■□□□ 1.33
TUBGCP6-208ENST00000498611 TONSLQ96HA7 1378 aa23.28■■□□□ 1.32
TUBGCP6-208ENST00000498611 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
TUBGCP6-208ENST00000498611 ZBTB7CA1YPR0 619 aa23.24■■□□□ 1.31
TUBGCP6-208ENST00000498611 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
TUBGCP6-208ENST00000498611 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
TUBGCP6-208ENST00000498611 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
TUBGCP6-208ENST00000498611 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
TUBGCP6-208ENST00000498611 CFDP1Q9UEE9 299 aaPredicted RBP23.17■■□□□ 1.3
TUBGCP6-208ENST00000498611 EEA1Q15075 1411 aa23.08■■□□□ 1.29
TUBGCP6-208ENST00000498611 PLEKHG5O94827 1062 aa23.08■■□□□ 1.29
TUBGCP6-208ENST00000498611 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.29
TUBGCP6-208ENST00000498611 LMOD2Q6P5Q4 547 aa23.06■■□□□ 1.28
TUBGCP6-208ENST00000498611 CARMIL2Q6F5E8 1435 aa23.05■■□□□ 1.28
TUBGCP6-208ENST00000498611 KANK1Q14678 1352 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms