RNA–Protein interactions for RNA: ENST00000479735.1

ZEB2-221, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 4

Gene ZEB2, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-221ENST00000479735 NISCHQ9Y2I1 1504 aa48.79■■■■■ 5.4
ZEB2-221ENST00000479735 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
ZEB2-221ENST00000479735 ABCC9O60706 1549 aa42.41■■■■■ 4.38
ZEB2-221ENST00000479735 DCAF8L2P0C7V8 631 aa40.8■■■■■ 4.12
ZEB2-221ENST00000479735 RB1CC1Q8TDY2 1594 aa40.73■■■■■ 4.11
ZEB2-221ENST00000479735 NACADO15069 1562 aa40.69■■■■■ 4.1
ZEB2-221ENST00000479735 ZCCHC6Q5VYS8 1495 aaKnown RBP40.66■■■■■ 4.1
ZEB2-221ENST00000479735 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
ZEB2-221ENST00000479735 DCAF1Q9Y4B6 1507 aa40.31■■■■■ 4.04
ZEB2-221ENST00000479735 UNC13AQ9UPW8 1703 aa39.91■■■■□ 3.98
ZEB2-221ENST00000479735 PABPN1Q86U42 306 aaKnown RBP eCLIP39.67■■■■□ 3.94
ZEB2-221ENST00000479735 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
ZEB2-221ENST00000479735 BICRAQ9NZM4 1560 aa39.58■■■■□ 3.93
ZEB2-221ENST00000479735 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
ZEB2-221ENST00000479735 DNAJC5BQ9UF47 199 aa38.92■■■■□ 3.82
ZEB2-221ENST00000479735 EIF4G1Q04637 1599 aaKnown RBP38.49■■■■□ 3.75
ZEB2-221ENST00000479735 CC2D2AQ9P2K1 1620 aa38.34■■■■□ 3.73
ZEB2-221ENST00000479735 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
ZEB2-221ENST00000479735 SMARCA4P51532 1647 aa37.86■■■■□ 3.65
ZEB2-221ENST00000479735 BAZ1AQ9NRL2 1556 aaPredicted RBP37.78■■■■□ 3.64
ZEB2-221ENST00000479735 MROH2BQ7Z745 1585 aa37.66■■■■□ 3.62
ZEB2-221ENST00000479735 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
ZEB2-221ENST00000479735 NCAPD3P42695 1498 aa37.56■■■■□ 3.6
ZEB2-221ENST00000479735 SMARCA2P51531 1590 aa37.53■■■■□ 3.6
ZEB2-221ENST00000479735 PEG3Q9GZU2 1588 aa37.44■■■■□ 3.58
ZEB2-221ENST00000479735 HMGXB3Q12766 1538 aa37.37■■■■□ 3.57
ZEB2-221ENST00000479735 BAZ1BQ9UIG0 1483 aaKnown RBP37.31■■■■□ 3.56
ZEB2-221ENST00000479735 WIZO95785 1651 aa37.28■■■■□ 3.56
ZEB2-221ENST00000479735 RSF1Q96T23 1441 aaPredicted RBP37.23■■■■□ 3.55
ZEB2-221ENST00000479735 TOP2AP11388 1531 aaKnown RBP36.81■■■■□ 3.48
ZEB2-221ENST00000479735 NESP48681 1621 aa36.74■■■■□ 3.47
ZEB2-221ENST00000479735 LAMC3Q9Y6N6 1575 aa36.55■■■■□ 3.44
ZEB2-221ENST00000479735 CADPSQ9ULU8 1353 aa36.48■■■■□ 3.43
ZEB2-221ENST00000479735 ERCC6Q03468 1493 aa36.48■■■■□ 3.43
ZEB2-221ENST00000479735 CCDC88BA6NC98 1476 aa36.43■■■■□ 3.42
ZEB2-221ENST00000479735 SUPT5HO00267 1087 aaKnown RBP36.39■■■■□ 3.42
ZEB2-221ENST00000479735 PDS5BQ9NTI5 1447 aa36.29■■■■□ 3.4
ZEB2-221ENST00000479735 KIF21AQ7Z4S6 1674 aa36.29■■■■□ 3.4
ZEB2-221ENST00000479735 CFTRP13569 1480 aa36.28■■■■□ 3.4
ZEB2-221ENST00000479735 THOC2Q8NI27 1593 aaKnown RBP36.12■■■■□ 3.37
ZEB2-221ENST00000479735 FANCD2Q9BXW9 1451 aa36.09■■■■□ 3.37
ZEB2-221ENST00000479735 CUX2O14529 1486 aa36.03■■■■□ 3.36
ZEB2-221ENST00000479735 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
ZEB2-221ENST00000479735 CEP164Q9UPV0 1460 aa36.01■■■■□ 3.36
ZEB2-221ENST00000479735 MRC2Q9UBG0 1479 aa35.95■■■■□ 3.35
ZEB2-221ENST00000479735 WDR62O43379 1518 aa35.83■■■■□ 3.33
ZEB2-221ENST00000479735 URB2Q14146 1524 aaKnown RBP35.76■■■■□ 3.31
ZEB2-221ENST00000479735 TOPBP1Q92547 1522 aa35.53■■■■□ 3.28
ZEB2-221ENST00000479735 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
ZEB2-221ENST00000479735 ABCC8Q09428 1581 aa35.43■■■■□ 3.26
ZEB2-221ENST00000479735 CUX1P39880 1505 aa35.32■■■■□ 3.25
ZEB2-221ENST00000479735 IFT140Q96RY7 1462 aa35.24■■■■□ 3.23
ZEB2-221ENST00000479735 POLA1P09884 1462 aaPredicted RBP35.22■■■■□ 3.23
ZEB2-221ENST00000479735 ZNF608Q9ULD9 1512 aaPredicted RBP35.16■■■■□ 3.22
ZEB2-221ENST00000479735 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
ZEB2-221ENST00000479735 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
ZEB2-221ENST00000479735 RAD54L2Q9Y4B4 1467 aa35.13■■■■□ 3.21
ZEB2-221ENST00000479735 SOGA1O94964 1423 aa35.08■■■■□ 3.21
ZEB2-221ENST00000479735 WRNQ14191 1432 aaPredicted RBP eCLIP35.07■■■■□ 3.21
ZEB2-221ENST00000479735 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
ZEB2-221ENST00000479735 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
ZEB2-221ENST00000479735 BIVM-ERCC5R4GMW8 1640 aa34.99■■■■□ 3.19
ZEB2-221ENST00000479735 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
ZEB2-221ENST00000479735 AQRO60306 1485 aaKnown RBP eCLIP34.97■■■■□ 3.19
ZEB2-221ENST00000479735 TDRD9Q8NDG6 1382 aaKnown RBP34.91■■■■□ 3.18
ZEB2-221ENST00000479735 DNAJC5Q9H3Z4 198 aa34.88■■■■□ 3.17
ZEB2-221ENST00000479735 WDR97A6NE52 1622 aa34.88■■■■□ 3.17
ZEB2-221ENST00000479735 ABCA10Q8WWZ4 1543 aa34.8■■■■□ 3.16
ZEB2-221ENST00000479735 ABCA5Q8WWZ7 1642 aa34.67■■■■□ 3.14
ZEB2-221ENST00000479735 GAPVD1Q14C86 1478 aa34.67■■■■□ 3.14
ZEB2-221ENST00000479735 GRIN2BQ13224 1484 aa34.64■■■■□ 3.14
ZEB2-221ENST00000479735 SNAPC4Q5SXM2 1469 aa34.63■■■■□ 3.13
ZEB2-221ENST00000479735 PBRM1Q86U86 1689 aa34.62■■■■□ 3.13
ZEB2-221ENST00000479735 OSCARQ8IYS5 282 aa34.57■■■■□ 3.12
ZEB2-221ENST00000479735 CHD1O14646 1710 aa34.57■■■■□ 3.12
ZEB2-221ENST00000479735 FBLN2P98095 1184 aa34.52■■■■□ 3.12
ZEB2-221ENST00000479735 MAGI1Q96QZ7 1491 aaPredicted RBP34.52■■■■□ 3.12
ZEB2-221ENST00000479735 SYNJ2O15056 1496 aa34.39■■■■□ 3.1
ZEB2-221ENST00000479735 CHMP7Q8WUX9 453 aaPredicted RBP34.39■■■■□ 3.1
ZEB2-221ENST00000479735 ERICH3Q5RHP9 1530 aa34.36■■■■□ 3.09
ZEB2-221ENST00000479735 ADAMTS12P58397 1594 aa34.34■■■■□ 3.09
ZEB2-221ENST00000479735 TRIM41Q8WV44 630 aa34.31■■■■□ 3.08
ZEB2-221ENST00000479735 KIF27Q86VH2 1401 aa34.3■■■■□ 3.08
ZEB2-221ENST00000479735 FHAD1B1AJZ9 1412 aa34.25■■■■□ 3.07
ZEB2-221ENST00000479735 GRIN2AQ12879 1464 aa34.21■■■■□ 3.07
ZEB2-221ENST00000479735 IGF1RP08069 1367 aa34.21■■■■□ 3.07
ZEB2-221ENST00000479735 CLASP1Q7Z460 1538 aa34.16■■■■□ 3.06
ZEB2-221ENST00000479735 RUSC2Q8N2Y8 1516 aa34.16■■■■□ 3.06
ZEB2-221ENST00000479735 CEP170Q5SW79 1584 aa34.08■■■■□ 3.05
ZEB2-221ENST00000479735 RIMBP3CA6NJZ7 1639 aa34.08■■■■□ 3.05
ZEB2-221ENST00000479735 RIMBP3BA6NNM3 1639 aa34.08■■■■□ 3.05
ZEB2-221ENST00000479735 RIMBP3Q9UFD9 1639 aa34.08■■■■□ 3.05
ZEB2-221ENST00000479735 CUL7Q14999 1698 aa34.06■■■■□ 3.04
ZEB2-221ENST00000479735 ARHGEF11O15085 1522 aa34.05■■■■□ 3.04
ZEB2-221ENST00000479735 NUP160Q12769 1436 aa34.04■■■■□ 3.04
ZEB2-221ENST00000479735 CARMIL1Q5VZK9 1371 aa33.99■■■■□ 3.03
ZEB2-221ENST00000479735 CHIC1Q5VXU3 224 aa33.99■■■■□ 3.03
ZEB2-221ENST00000479735 ARAP1Q96P48 1450 aa33.81■■■■□ 3
ZEB2-221ENST00000479735 SHROOM2Q13796 1616 aa33.79■■■■□ 3
ZEB2-221ENST00000479735 RAPGEF2Q9Y4G8 1499 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms