RNA–Protein interactions for RNA: ENST00000410003.5

TTC31-202, Transcript of tetratricopeptide repeat domain 31, humanhuman

TSL 1 (best) BASIC

Gene TTC31, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC31-202ENST00000410003 NISCHQ9Y2I1 1504 aa19.7■□□□□ 0.74
TTC31-202ENST00000410003 SHROOM4Q9ULL8 1493 aa17.62■□□□□ 0.41
TTC31-202ENST00000410003 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
TTC31-202ENST00000410003 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
TTC31-202ENST00000410003 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
TTC31-202ENST00000410003 ABCC9O60706 1549 aa16.51■□□□□ 0.23
TTC31-202ENST00000410003 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
TTC31-202ENST00000410003 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
TTC31-202ENST00000410003 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
TTC31-202ENST00000410003 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
TTC31-202ENST00000410003 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
TTC31-202ENST00000410003 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
TTC31-202ENST00000410003 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
TTC31-202ENST00000410003 HRCP23327 699 aa16.25■□□□□ 0.19
TTC31-202ENST00000410003 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
TTC31-202ENST00000410003 FAM9AQ8IZU1 332 aaPredicted RBP16.12■□□□□ 0.17
TTC31-202ENST00000410003 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
TTC31-202ENST00000410003 MYT1Q01538 1121 aa15.9■□□□□ 0.14
TTC31-202ENST00000410003 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
TTC31-202ENST00000410003 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
TTC31-202ENST00000410003 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
TTC31-202ENST00000410003 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
TTC31-202ENST00000410003 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
TTC31-202ENST00000410003 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
TTC31-202ENST00000410003 TRIM26Q12899 539 aaPredicted RBP15.63■□□□□ 0.09
TTC31-202ENST00000410003 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
TTC31-202ENST00000410003 MROH2BQ7Z745 1585 aa15.48■□□□□ 0.07
TTC31-202ENST00000410003 NACADO15069 1562 aa15.4■□□□□ 0.06
TTC31-202ENST00000410003 WIZO95785 1651 aa15.39■□□□□ 0.05
TTC31-202ENST00000410003 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
TTC31-202ENST00000410003 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
TTC31-202ENST00000410003 ZEB1P37275 1124 aaPredicted RBP15.34■□□□□ 0.05
TTC31-202ENST00000410003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
TTC31-202ENST00000410003 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
TTC31-202ENST00000410003 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
TTC31-202ENST00000410003 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
TTC31-202ENST00000410003 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
TTC31-202ENST00000410003 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
TTC31-202ENST00000410003 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
TTC31-202ENST00000410003 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
TTC31-202ENST00000410003 SOGA1O94964 1423 aa15.11■□□□□ 0.01
TTC31-202ENST00000410003 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
TTC31-202ENST00000410003 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
TTC31-202ENST00000410003 DIEXFQ68CQ4 756 aaKnown RBP15.06■□□□□ 0
TTC31-202ENST00000410003 RUSC2Q8N2Y8 1516 aa15.06■□□□□ 0
TTC31-202ENST00000410003 CENPBP07199 599 aaPredicted RBP15.05■□□□□ -0
TTC31-202ENST00000410003 ACIN1Q9UKV3 1341 aaKnown RBP15.03■□□□□ -0
TTC31-202ENST00000410003 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02□□□□□ -0.01
TTC31-202ENST00000410003 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
TTC31-202ENST00000410003 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
TTC31-202ENST00000410003 CEP162Q5TB80 1403 aa14.96□□□□□ -0.02
TTC31-202ENST00000410003 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
TTC31-202ENST00000410003 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
TTC31-202ENST00000410003 UNC13AQ9UPW8 1703 aa14.89□□□□□ -0.03
TTC31-202ENST00000410003 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
TTC31-202ENST00000410003 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
TTC31-202ENST00000410003 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
TTC31-202ENST00000410003 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
TTC31-202ENST00000410003 APLP2Q06481 763 aa14.83□□□□□ -0.04
TTC31-202ENST00000410003 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
TTC31-202ENST00000410003 ITGAEP38570 1179 aa14.76□□□□□ -0.05
TTC31-202ENST00000410003 BAZ1BQ9UIG0 1483 aaKnown RBP14.72□□□□□ -0.05
TTC31-202ENST00000410003 GOLGA3Q08378 1498 aa14.71□□□□□ -0.05
TTC31-202ENST00000410003 CLIP1P30622 1438 aa14.7□□□□□ -0.06
TTC31-202ENST00000410003 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
TTC31-202ENST00000410003 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
TTC31-202ENST00000410003 ZNF316A6NFI3 1004 aaPredicted RBP14.68□□□□□ -0.06
TTC31-202ENST00000410003 MIER1Q8N108 512 aa14.68□□□□□ -0.06
TTC31-202ENST00000410003 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
TTC31-202ENST00000410003 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
TTC31-202ENST00000410003 ATP1B4Q9UN42 357 aaPredicted RBP14.65□□□□□ -0.06
TTC31-202ENST00000410003 CC2D2AQ9P2K1 1620 aa14.61□□□□□ -0.07
TTC31-202ENST00000410003 EEA1Q15075 1411 aa14.61□□□□□ -0.07
TTC31-202ENST00000410003 CEP164Q9UPV0 1460 aa14.59□□□□□ -0.07
TTC31-202ENST00000410003 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
TTC31-202ENST00000410003 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
TTC31-202ENST00000410003 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
TTC31-202ENST00000410003 BCANQ96GW7 911 aa14.51□□□□□ -0.09
TTC31-202ENST00000410003 VPS8Q8N3P4 1428 aa14.5□□□□□ -0.09
TTC31-202ENST00000410003 KIF21BO75037 1637 aa14.43□□□□□ -0.1
TTC31-202ENST00000410003 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
TTC31-202ENST00000410003 FAM50AQ14320 339 aaKnown RBP14.4□□□□□ -0.1
TTC31-202ENST00000410003 CUX1P39880 1505 aa14.36□□□□□ -0.11
TTC31-202ENST00000410003 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
TTC31-202ENST00000410003 KIF27Q86VH2 1401 aa14.35□□□□□ -0.11
TTC31-202ENST00000410003 HIRIP3Q9BW71 556 aaPredicted RBP14.34□□□□□ -0.11
TTC31-202ENST00000410003 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
TTC31-202ENST00000410003 CUX2O14529 1486 aa14.33□□□□□ -0.12
TTC31-202ENST00000410003 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
TTC31-202ENST00000410003 ERCC6Q03468 1493 aa14.3□□□□□ -0.12
TTC31-202ENST00000410003 PRXQ9BXM0 1461 aa14.28□□□□□ -0.12
TTC31-202ENST00000410003 DHX57Q6P158 1386 aaKnown RBP14.27□□□□□ -0.12
TTC31-202ENST00000410003 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.13
TTC31-202ENST00000410003 NCAPD3P42695 1498 aa14.27□□□□□ -0.13
TTC31-202ENST00000410003 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
TTC31-202ENST00000410003 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
TTC31-202ENST00000410003 IGF1RP08069 1367 aa14.23□□□□□ -0.13
TTC31-202ENST00000410003 CARMIL1Q5VZK9 1371 aa14.23□□□□□ -0.13
TTC31-202ENST00000410003 ARHGAP35Q9NRY4 1499 aa14.22□□□□□ -0.13
TTC31-202ENST00000410003 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms