RNA–Protein interactions for RNA: ENST00000529452.5

SLC43A1-205, Transcript of solute carrier family 43 member 1, humanhuman

TSL 3

Gene SLC43A1, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-205ENST00000529452 NISCHQ9Y2I1 1504 aa31.18■■■□□ 2.58
SLC43A1-205ENST00000529452 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
SLC43A1-205ENST00000529452 ABCC9O60706 1549 aa26.92■■□□□ 1.9
SLC43A1-205ENST00000529452 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
SLC43A1-205ENST00000529452 NACADO15069 1562 aa25.99■■□□□ 1.75
SLC43A1-205ENST00000529452 RB1CC1Q8TDY2 1594 aa25.96■■□□□ 1.75
SLC43A1-205ENST00000529452 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
SLC43A1-205ENST00000529452 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
SLC43A1-205ENST00000529452 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
SLC43A1-205ENST00000529452 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
SLC43A1-205ENST00000529452 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
SLC43A1-205ENST00000529452 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
SLC43A1-205ENST00000529452 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
SLC43A1-205ENST00000529452 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
SLC43A1-205ENST00000529452 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
SLC43A1-205ENST00000529452 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
SLC43A1-205ENST00000529452 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.5
SLC43A1-205ENST00000529452 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
SLC43A1-205ENST00000529452 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
SLC43A1-205ENST00000529452 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
SLC43A1-205ENST00000529452 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
SLC43A1-205ENST00000529452 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
SLC43A1-205ENST00000529452 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
SLC43A1-205ENST00000529452 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
SLC43A1-205ENST00000529452 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
SLC43A1-205ENST00000529452 HMGXB3Q12766 1538 aa23.89■■□□□ 1.42
SLC43A1-205ENST00000529452 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
SLC43A1-205ENST00000529452 BAZ1BQ9UIG0 1483 aaKnown RBP23.77■■□□□ 1.4
SLC43A1-205ENST00000529452 WIZO95785 1651 aa23.74■■□□□ 1.39
SLC43A1-205ENST00000529452 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
SLC43A1-205ENST00000529452 NESP48681 1621 aa23.36■■□□□ 1.33
SLC43A1-205ENST00000529452 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
SLC43A1-205ENST00000529452 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
SLC43A1-205ENST00000529452 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
SLC43A1-205ENST00000529452 CFTRP13569 1480 aa23.19■■□□□ 1.3
SLC43A1-205ENST00000529452 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
SLC43A1-205ENST00000529452 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
SLC43A1-205ENST00000529452 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
SLC43A1-205ENST00000529452 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
SLC43A1-205ENST00000529452 THOC2Q8NI27 1593 aaKnown RBP23.03■■□□□ 1.28
SLC43A1-205ENST00000529452 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
SLC43A1-205ENST00000529452 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
SLC43A1-205ENST00000529452 CUX2O14529 1486 aa22.97■■□□□ 1.27
SLC43A1-205ENST00000529452 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
SLC43A1-205ENST00000529452 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
SLC43A1-205ENST00000529452 WDR62O43379 1518 aa22.87■■□□□ 1.25
SLC43A1-205ENST00000529452 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
SLC43A1-205ENST00000529452 TOPBP1Q92547 1522 aa22.66■■□□□ 1.22
SLC43A1-205ENST00000529452 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
SLC43A1-205ENST00000529452 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
SLC43A1-205ENST00000529452 CUX1P39880 1505 aa22.53■■□□□ 1.2
SLC43A1-205ENST00000529452 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
SLC43A1-205ENST00000529452 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
SLC43A1-205ENST00000529452 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
SLC43A1-205ENST00000529452 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
SLC43A1-205ENST00000529452 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
SLC43A1-205ENST00000529452 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
SLC43A1-205ENST00000529452 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
SLC43A1-205ENST00000529452 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
SLC43A1-205ENST00000529452 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
SLC43A1-205ENST00000529452 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
SLC43A1-205ENST00000529452 SOGA1O94964 1423 aa22.34■■□□□ 1.17
SLC43A1-205ENST00000529452 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
SLC43A1-205ENST00000529452 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
SLC43A1-205ENST00000529452 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.154e-7■■■□□ 15.6
SLC43A1-205ENST00000529452 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
SLC43A1-205ENST00000529452 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
SLC43A1-205ENST00000529452 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
SLC43A1-205ENST00000529452 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
SLC43A1-205ENST00000529452 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
SLC43A1-205ENST00000529452 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
SLC43A1-205ENST00000529452 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
SLC43A1-205ENST00000529452 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
SLC43A1-205ENST00000529452 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
SLC43A1-205ENST00000529452 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
SLC43A1-205ENST00000529452 CHD1O14646 1710 aa21.96■■□□□ 1.11
SLC43A1-205ENST00000529452 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
SLC43A1-205ENST00000529452 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
SLC43A1-205ENST00000529452 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
SLC43A1-205ENST00000529452 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
SLC43A1-205ENST00000529452 FHAD1B1AJZ9 1412 aa21.85■■□□□ 1.09
SLC43A1-205ENST00000529452 IGF1RP08069 1367 aa21.84■■□□□ 1.09
SLC43A1-205ENST00000529452 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
SLC43A1-205ENST00000529452 FBLN2P98095 1184 aa21.82■■□□□ 1.08
SLC43A1-205ENST00000529452 GRIN2AQ12879 1464 aa21.82■■□□□ 1.08
SLC43A1-205ENST00000529452 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
SLC43A1-205ENST00000529452 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
SLC43A1-205ENST00000529452 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
SLC43A1-205ENST00000529452 NUP160Q12769 1436 aa21.76■■□□□ 1.07
SLC43A1-205ENST00000529452 CUL7Q14999 1698 aa21.74■■□□□ 1.07
SLC43A1-205ENST00000529452 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
SLC43A1-205ENST00000529452 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
SLC43A1-205ENST00000529452 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
SLC43A1-205ENST00000529452 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
SLC43A1-205ENST00000529452 RIMBP3CA6NJZ7 1639 aa21.65■■□□□ 1.06
SLC43A1-205ENST00000529452 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
SLC43A1-205ENST00000529452 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
SLC43A1-205ENST00000529452 SHROOM2Q13796 1616 aa21.58■■□□□ 1.05
SLC43A1-205ENST00000529452 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
SLC43A1-205ENST00000529452 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms