RNA–Protein interactions for RNA: ENST00000533515.5

SLC43A1-209, Transcript of solute carrier family 43 member 1, humanhuman

TSL 5

Gene SLC43A1, Length 774 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-209ENST00000533515 NISCHQ9Y2I1 1504 aa32.95■■■□□ 2.87
SLC43A1-209ENST00000533515 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
SLC43A1-209ENST00000533515 ABCC9O60706 1549 aa28.81■■■□□ 2.2
SLC43A1-209ENST00000533515 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
SLC43A1-209ENST00000533515 DCAF8L2P0C7V8 631 aa27.56■■■□□ 2
SLC43A1-209ENST00000533515 NACADO15069 1562 aa27.53■■■□□ 2
SLC43A1-209ENST00000533515 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
SLC43A1-209ENST00000533515 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
SLC43A1-209ENST00000533515 DNAJC5BQ9UF47 199 aa27.29■■□□□ 1.96
SLC43A1-209ENST00000533515 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
SLC43A1-209ENST00000533515 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
SLC43A1-209ENST00000533515 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
SLC43A1-209ENST00000533515 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
SLC43A1-209ENST00000533515 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
SLC43A1-209ENST00000533515 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
SLC43A1-209ENST00000533515 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
SLC43A1-209ENST00000533515 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
SLC43A1-209ENST00000533515 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
SLC43A1-209ENST00000533515 DNAJC5Q9H3Z4 198 aa25.61■■□□□ 1.69
SLC43A1-209ENST00000533515 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
SLC43A1-209ENST00000533515 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
SLC43A1-209ENST00000533515 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
SLC43A1-209ENST00000533515 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
SLC43A1-209ENST00000533515 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
SLC43A1-209ENST00000533515 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
SLC43A1-209ENST00000533515 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
SLC43A1-209ENST00000533515 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
SLC43A1-209ENST00000533515 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
SLC43A1-209ENST00000533515 WIZO95785 1651 aa25.17■■□□□ 1.62
SLC43A1-209ENST00000533515 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
SLC43A1-209ENST00000533515 NESP48681 1621 aa24.94■■□□□ 1.58
SLC43A1-209ENST00000533515 CUX2O14529 1486 aa24.84■■□□□ 1.57
SLC43A1-209ENST00000533515 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
SLC43A1-209ENST00000533515 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
SLC43A1-209ENST00000533515 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
SLC43A1-209ENST00000533515 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
SLC43A1-209ENST00000533515 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
SLC43A1-209ENST00000533515 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
SLC43A1-209ENST00000533515 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
SLC43A1-209ENST00000533515 CFTRP13569 1480 aa24.54■■□□□ 1.52
SLC43A1-209ENST00000533515 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
SLC43A1-209ENST00000533515 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
SLC43A1-209ENST00000533515 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
SLC43A1-209ENST00000533515 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
SLC43A1-209ENST00000533515 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
SLC43A1-209ENST00000533515 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
SLC43A1-209ENST00000533515 TRIM41Q8WV44 630 aa24.3■■□□□ 1.48
SLC43A1-209ENST00000533515 WDR62O43379 1518 aa24.3■■□□□ 1.48
SLC43A1-209ENST00000533515 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
SLC43A1-209ENST00000533515 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
SLC43A1-209ENST00000533515 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
SLC43A1-209ENST00000533515 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
SLC43A1-209ENST00000533515 CUX1P39880 1505 aa23.87■■□□□ 1.41
SLC43A1-209ENST00000533515 ZNF608Q9ULD9 1512 aaPredicted RBP23.85■■□□□ 1.41
SLC43A1-209ENST00000533515 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
SLC43A1-209ENST00000533515 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
SLC43A1-209ENST00000533515 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
SLC43A1-209ENST00000533515 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
SLC43A1-209ENST00000533515 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
SLC43A1-209ENST00000533515 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
SLC43A1-209ENST00000533515 SOGA1O94964 1423 aa23.71■■□□□ 1.39
SLC43A1-209ENST00000533515 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.384e-7■■■■□ 22.8
SLC43A1-209ENST00000533515 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
SLC43A1-209ENST00000533515 SYNJ1O43426 1573 aa23.64■■□□□ 1.37
SLC43A1-209ENST00000533515 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
SLC43A1-209ENST00000533515 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
SLC43A1-209ENST00000533515 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
SLC43A1-209ENST00000533515 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
SLC43A1-209ENST00000533515 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
SLC43A1-209ENST00000533515 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
SLC43A1-209ENST00000533515 SNAPC4Q5SXM2 1469 aa23.45■■□□□ 1.34
SLC43A1-209ENST00000533515 CHD1O14646 1710 aa23.45■■□□□ 1.34
SLC43A1-209ENST00000533515 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
SLC43A1-209ENST00000533515 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
SLC43A1-209ENST00000533515 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
SLC43A1-209ENST00000533515 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
SLC43A1-209ENST00000533515 FBLN2P98095 1184 aa23.37■■□□□ 1.33
SLC43A1-209ENST00000533515 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
SLC43A1-209ENST00000533515 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.33
SLC43A1-209ENST00000533515 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.33
SLC43A1-209ENST00000533515 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.33
SLC43A1-209ENST00000533515 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
SLC43A1-209ENST00000533515 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
SLC43A1-209ENST00000533515 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
SLC43A1-209ENST00000533515 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
SLC43A1-209ENST00000533515 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
SLC43A1-209ENST00000533515 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
SLC43A1-209ENST00000533515 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
SLC43A1-209ENST00000533515 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
SLC43A1-209ENST00000533515 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
SLC43A1-209ENST00000533515 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
SLC43A1-209ENST00000533515 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
SLC43A1-209ENST00000533515 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
SLC43A1-209ENST00000533515 IGF1RP08069 1367 aa23.07■■□□□ 1.28
SLC43A1-209ENST00000533515 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
SLC43A1-209ENST00000533515 NUP160Q12769 1436 aa23.05■■□□□ 1.28
SLC43A1-209ENST00000533515 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
SLC43A1-209ENST00000533515 ARAP1Q96P48 1450 aa23■■□□□ 1.27
SLC43A1-209ENST00000533515 CUL7Q14999 1698 aa22.97■■□□□ 1.27
SLC43A1-209ENST00000533515 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms