RNA–Protein interactions for RNA: ENST00000586285.2

TMEM259-204, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-204ENST00000586285 NISCHQ9Y2I1 1504 aa29.31■■■□□ 2.28
TMEM259-204ENST00000586285 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
TMEM259-204ENST00000586285 ABCC9O60706 1549 aa24.76■■□□□ 1.55
TMEM259-204ENST00000586285 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.52
TMEM259-204ENST00000586285 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
TMEM259-204ENST00000586285 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
TMEM259-204ENST00000586285 NACADO15069 1562 aa24.09■■□□□ 1.45
TMEM259-204ENST00000586285 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
TMEM259-204ENST00000586285 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
TMEM259-204ENST00000586285 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
TMEM259-204ENST00000586285 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
TMEM259-204ENST00000586285 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
TMEM259-204ENST00000586285 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
TMEM259-204ENST00000586285 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.3
TMEM259-204ENST00000586285 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.272e-9■□□□□ 10.2
TMEM259-204ENST00000586285 CECR2Q9BXF3 1484 aa22.69■■□□□ 1.22
TMEM259-204ENST00000586285 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
TMEM259-204ENST00000586285 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
TMEM259-204ENST00000586285 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
TMEM259-204ENST00000586285 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
TMEM259-204ENST00000586285 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
TMEM259-204ENST00000586285 PEG3Q9GZU2 1588 aa22.43■■□□□ 1.18
TMEM259-204ENST00000586285 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
TMEM259-204ENST00000586285 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
TMEM259-204ENST00000586285 SMARCA2P51531 1590 aa22.33■■□□□ 1.16
TMEM259-204ENST00000586285 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
TMEM259-204ENST00000586285 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
TMEM259-204ENST00000586285 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
TMEM259-204ENST00000586285 WIZO95785 1651 aa22.23■■□□□ 1.15
TMEM259-204ENST00000586285 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
TMEM259-204ENST00000586285 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
TMEM259-204ENST00000586285 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
TMEM259-204ENST00000586285 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
TMEM259-204ENST00000586285 CUX2O14529 1486 aa21.64■■□□□ 1.06
TMEM259-204ENST00000586285 CFTRP13569 1480 aa21.64■■□□□ 1.06
TMEM259-204ENST00000586285 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
TMEM259-204ENST00000586285 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
TMEM259-204ENST00000586285 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
TMEM259-204ENST00000586285 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
TMEM259-204ENST00000586285 NESP48681 1621 aa21.35■■□□□ 1.01
TMEM259-204ENST00000586285 PRDM2Q13029 1718 aa21.32■■□□□ 1
TMEM259-204ENST00000586285 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
TMEM259-204ENST00000586285 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
TMEM259-204ENST00000586285 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
TMEM259-204ENST00000586285 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
TMEM259-204ENST00000586285 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
TMEM259-204ENST00000586285 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
TMEM259-204ENST00000586285 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
TMEM259-204ENST00000586285 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
TMEM259-204ENST00000586285 CUX1P39880 1505 aa21.11■□□□□ 0.97
TMEM259-204ENST00000586285 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
TMEM259-204ENST00000586285 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
TMEM259-204ENST00000586285 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
TMEM259-204ENST00000586285 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
TMEM259-204ENST00000586285 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
TMEM259-204ENST00000586285 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
TMEM259-204ENST00000586285 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
TMEM259-204ENST00000586285 WDR62O43379 1518 aa21■□□□□ 0.95
TMEM259-204ENST00000586285 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
TMEM259-204ENST00000586285 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
TMEM259-204ENST00000586285 EEA1Q15075 1411 aa20.87■□□□□ 0.93
TMEM259-204ENST00000586285 SOGA1O94964 1423 aa20.84■□□□□ 0.93
TMEM259-204ENST00000586285 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.93
TMEM259-204ENST00000586285 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
TMEM259-204ENST00000586285 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
TMEM259-204ENST00000586285 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
TMEM259-204ENST00000586285 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
TMEM259-204ENST00000586285 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
TMEM259-204ENST00000586285 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
TMEM259-204ENST00000586285 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
TMEM259-204ENST00000586285 IGF1RP08069 1367 aa20.63■□□□□ 0.89
TMEM259-204ENST00000586285 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
TMEM259-204ENST00000586285 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
TMEM259-204ENST00000586285 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
TMEM259-204ENST00000586285 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
TMEM259-204ENST00000586285 PRXQ9BXM0 1461 aa20.58■□□□□ 0.89
TMEM259-204ENST00000586285 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
TMEM259-204ENST00000586285 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
TMEM259-204ENST00000586285 GRIN2BQ13224 1484 aa20.54■□□□□ 0.88
TMEM259-204ENST00000586285 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.881e-21■■■■■ 50.2
TMEM259-204ENST00000586285 KIF21BO75037 1637 aa20.51■□□□□ 0.87
TMEM259-204ENST00000586285 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
TMEM259-204ENST00000586285 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
TMEM259-204ENST00000586285 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
TMEM259-204ENST00000586285 CUL7Q14999 1698 aa20.46■□□□□ 0.87
TMEM259-204ENST00000586285 GOLGA3Q08378 1498 aa20.45■□□□□ 0.86
TMEM259-204ENST00000586285 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
TMEM259-204ENST00000586285 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
TMEM259-204ENST00000586285 RAPGEF2Q9Y4G8 1499 aa20.43■□□□□ 0.86
TMEM259-204ENST00000586285 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
TMEM259-204ENST00000586285 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
TMEM259-204ENST00000586285 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
TMEM259-204ENST00000586285 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
TMEM259-204ENST00000586285 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
TMEM259-204ENST00000586285 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
TMEM259-204ENST00000586285 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
TMEM259-204ENST00000586285 LOC105371045A0A1W2PR82 267 aa20.35■□□□□ 0.85
TMEM259-204ENST00000586285 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
TMEM259-204ENST00000586285 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
TMEM259-204ENST00000586285 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms