RNA–Protein interactions for RNA: ENST00000456774.5

PLXNB1-204, Transcript of plexin B1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PLXNB1, Length 5,859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-204ENST00000456774 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
PLXNB1-204ENST00000456774 NISCHQ9Y2I1 1504 aa24.18■■□□□ 1.46
PLXNB1-204ENST00000456774 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
PLXNB1-204ENST00000456774 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
PLXNB1-204ENST00000456774 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
PLXNB1-204ENST00000456774 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
PLXNB1-204ENST00000456774 APLP2Q06481 763 aa22.61■■□□□ 1.21
PLXNB1-204ENST00000456774 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
PLXNB1-204ENST00000456774 MYT1Q01538 1121 aa22.34■■□□□ 1.17
PLXNB1-204ENST00000456774 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
PLXNB1-204ENST00000456774 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
PLXNB1-204ENST00000456774 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
PLXNB1-204ENST00000456774 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
PLXNB1-204ENST00000456774 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
PLXNB1-204ENST00000456774 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
PLXNB1-204ENST00000456774 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
PLXNB1-204ENST00000456774 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
PLXNB1-204ENST00000456774 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
PLXNB1-204ENST00000456774 ERICH6Q7L0X2 663 aa21.55■■□□□ 1.04
PLXNB1-204ENST00000456774 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
PLXNB1-204ENST00000456774 TRIM26Q12899 539 aaPredicted RBP21.21■□□□□ 0.99
PLXNB1-204ENST00000456774 NEFLP07196 543 aa21.19■□□□□ 0.98
PLXNB1-204ENST00000456774 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
PLXNB1-204ENST00000456774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.13■□□□□ 0.97
PLXNB1-204ENST00000456774 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
PLXNB1-204ENST00000456774 ITGAEP38570 1179 aa21.09■□□□□ 0.97
PLXNB1-204ENST00000456774 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
PLXNB1-204ENST00000456774 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
PLXNB1-204ENST00000456774 LOC105371045A0A1W2PR82 267 aa21.03■□□□□ 0.96
PLXNB1-204ENST00000456774 ABCC9O60706 1549 aa20.91■□□□□ 0.94
PLXNB1-204ENST00000456774 POLR3GLQ9BT43 218 aa20.88■□□□□ 0.93
PLXNB1-204ENST00000456774 HRCP23327 699 aa20.86■□□□□ 0.93
PLXNB1-204ENST00000456774 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.922e-7■■□□□ 13
PLXNB1-204ENST00000456774 CNGB1Q14028 1251 aaPredicted RBP20.63■□□□□ 0.89
PLXNB1-204ENST00000456774 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
PLXNB1-204ENST00000456774 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
PLXNB1-204ENST00000456774 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
PLXNB1-204ENST00000456774 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
PLXNB1-204ENST00000456774 DIEXFQ68CQ4 756 aaKnown RBP20.4■□□□□ 0.86
PLXNB1-204ENST00000456774 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
PLXNB1-204ENST00000456774 FBLN2P98095 1184 aa20.35■□□□□ 0.85
PLXNB1-204ENST00000456774 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
PLXNB1-204ENST00000456774 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
PLXNB1-204ENST00000456774 CLSPNQ9HAW4 1339 aa20.18■□□□□ 0.82
PLXNB1-204ENST00000456774 P3H3Q8IVL6 736 aa20.16■□□□□ 0.82
PLXNB1-204ENST00000456774 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
PLXNB1-204ENST00000456774 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
PLXNB1-204ENST00000456774 ANP32CO43423 234 aa20.12■□□□□ 0.81
PLXNB1-204ENST00000456774 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
PLXNB1-204ENST00000456774 ZNF316A6NFI3 1004 aaPredicted RBP20.1■□□□□ 0.81
PLXNB1-204ENST00000456774 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
PLXNB1-204ENST00000456774 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
PLXNB1-204ENST00000456774 CDK11AQ9UQ88 783 aaPredicted RBP19.95■□□□□ 0.78
PLXNB1-204ENST00000456774 BCANQ96GW7 911 aa19.94■□□□□ 0.78
PLXNB1-204ENST00000456774 GTF3C3Q9Y5Q9 886 aa19.94■□□□□ 0.78
PLXNB1-204ENST00000456774 ZBTB47Q9UFB7 747 aaPredicted RBP19.87■□□□□ 0.77
PLXNB1-204ENST00000456774 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
PLXNB1-204ENST00000456774 CANXP27824 592 aaKnown RBP19.83■□□□□ 0.76
PLXNB1-204ENST00000456774 NEFMP07197 916 aa19.82■□□□□ 0.76
PLXNB1-204ENST00000456774 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
PLXNB1-204ENST00000456774 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
PLXNB1-204ENST00000456774 ESF1Q9H501 851 aaKnown RBP19.72■□□□□ 0.75
PLXNB1-204ENST00000456774 TONSLQ96HA7 1378 aa19.72■□□□□ 0.75
PLXNB1-204ENST00000456774 NPM1P06748 294 aaKnown RBP eCLIP19.67■□□□□ 0.74
PLXNB1-204ENST00000456774 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
PLXNB1-204ENST00000456774 CHGAP10645 457 aaKnown RBP19.66■□□□□ 0.74
PLXNB1-204ENST00000456774 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.74
PLXNB1-204ENST00000456774 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
PLXNB1-204ENST00000456774 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
PLXNB1-204ENST00000456774 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
PLXNB1-204ENST00000456774 GLIPR1L2Q4G1C9 344 aa19.54■□□□□ 0.72
PLXNB1-204ENST00000456774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.724e-8■□□□□ 11
PLXNB1-204ENST00000456774 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
PLXNB1-204ENST00000456774 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
PLXNB1-204ENST00000456774 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
PLXNB1-204ENST00000456774 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
PLXNB1-204ENST00000456774 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
PLXNB1-204ENST00000456774 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
PLXNB1-204ENST00000456774 ANP32AP39687 249 aaKnown RBP19.48■□□□□ 0.71
PLXNB1-204ENST00000456774 CLIP1P30622 1438 aa19.47■□□□□ 0.71
PLXNB1-204ENST00000456774 HNRNPUQ00839 825 aaKnown RBP eCLIP19.45■□□□□ 0.7
PLXNB1-204ENST00000456774 FAM9BQ8IZU0 186 aa19.44■□□□□ 0.7
PLXNB1-204ENST00000456774 FKBP8Q14318 412 aa19.41■□□□□ 0.7
PLXNB1-204ENST00000456774 NPM2Q86SE8 214 aaKnown RBP19.4■□□□□ 0.7
PLXNB1-204ENST00000456774 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
PLXNB1-204ENST00000456774 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
PLXNB1-204ENST00000456774 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
PLXNB1-204ENST00000456774 NACADO15069 1562 aa19.36■□□□□ 0.69
PLXNB1-204ENST00000456774 EEA1Q15075 1411 aa19.35■□□□□ 0.69
PLXNB1-204ENST00000456774 TMC1Q8TDI8 760 aa19.35■□□□□ 0.69
PLXNB1-204ENST00000456774 SALL2Q9Y467 1007 aaPredicted RBP19.35■□□□□ 0.69
PLXNB1-204ENST00000456774 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.69
PLXNB1-204ENST00000456774 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
PLXNB1-204ENST00000456774 WDR43Q15061 677 aaKnown RBP eCLIP19.3■□□□□ 0.688e-8■■■■□ 19.9
PLXNB1-204ENST00000456774 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
PLXNB1-204ENST00000456774 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
PLXNB1-204ENST00000456774 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
PLXNB1-204ENST00000456774 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
PLXNB1-204ENST00000456774 MRS2Q9HD23 443 aa19.26■□□□□ 0.67
PLXNB1-204ENST00000456774 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms