RNA–Protein interactions for RNA: ENST00000520230.5

NDRG1-214, Transcript of N-myc downstream regulated 1, humanhuman

TSL 4

Gene NDRG1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-214ENST00000520230 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
NDRG1-214ENST00000520230 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
NDRG1-214ENST00000520230 ABCC9O60706 1549 aa29.74■■■□□ 2.35
NDRG1-214ENST00000520230 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
NDRG1-214ENST00000520230 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
NDRG1-214ENST00000520230 NACADO15069 1562 aa28.15■■■□□ 2.1
NDRG1-214ENST00000520230 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
NDRG1-214ENST00000520230 DNAJC5BQ9UF47 199 aa27.72■■■□□ 2.03
NDRG1-214ENST00000520230 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
NDRG1-214ENST00000520230 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
NDRG1-214ENST00000520230 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
NDRG1-214ENST00000520230 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
NDRG1-214ENST00000520230 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
NDRG1-214ENST00000520230 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
NDRG1-214ENST00000520230 SHROOM4Q9ULL8 1493 aa27.11■■□□□ 1.93
NDRG1-214ENST00000520230 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
NDRG1-214ENST00000520230 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
NDRG1-214ENST00000520230 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
NDRG1-214ENST00000520230 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
NDRG1-214ENST00000520230 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
NDRG1-214ENST00000520230 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
NDRG1-214ENST00000520230 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
NDRG1-214ENST00000520230 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
NDRG1-214ENST00000520230 HMGXB3Q12766 1538 aa25.79■■□□□ 1.72
NDRG1-214ENST00000520230 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
NDRG1-214ENST00000520230 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
NDRG1-214ENST00000520230 MROH2BQ7Z745 1585 aa25.62■■□□□ 1.69
NDRG1-214ENST00000520230 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
NDRG1-214ENST00000520230 CUX2O14529 1486 aa25.57■■□□□ 1.68
NDRG1-214ENST00000520230 NESP48681 1621 aa25.55■■□□□ 1.68
NDRG1-214ENST00000520230 DNAJC5Q9H3Z4 198 aa25.42■■□□□ 1.66
NDRG1-214ENST00000520230 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
NDRG1-214ENST00000520230 WIZO95785 1651 aa25.34■■□□□ 1.65
NDRG1-214ENST00000520230 PDS5BQ9NTI5 1447 aa25.28■■□□□ 1.64
NDRG1-214ENST00000520230 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
NDRG1-214ENST00000520230 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
NDRG1-214ENST00000520230 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
NDRG1-214ENST00000520230 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
NDRG1-214ENST00000520230 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
NDRG1-214ENST00000520230 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
NDRG1-214ENST00000520230 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
NDRG1-214ENST00000520230 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
NDRG1-214ENST00000520230 WDR62O43379 1518 aa24.93■■□□□ 1.58
NDRG1-214ENST00000520230 CFTRP13569 1480 aa24.91■■□□□ 1.58
NDRG1-214ENST00000520230 CCDC88BA6NC98 1476 aa24.73■■□□□ 1.55
NDRG1-214ENST00000520230 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
NDRG1-214ENST00000520230 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
NDRG1-214ENST00000520230 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
NDRG1-214ENST00000520230 TOPBP1Q92547 1522 aa24.46■■□□□ 1.51
NDRG1-214ENST00000520230 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
NDRG1-214ENST00000520230 IFT140Q96RY7 1462 aa24.45■■□□□ 1.51
NDRG1-214ENST00000520230 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
NDRG1-214ENST00000520230 DNMBPQ6XZF7 1577 aa24.39■■□□□ 1.5
NDRG1-214ENST00000520230 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
NDRG1-214ENST00000520230 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
NDRG1-214ENST00000520230 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
NDRG1-214ENST00000520230 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
NDRG1-214ENST00000520230 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
NDRG1-214ENST00000520230 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.463e-8■■■■■ 26.8
NDRG1-214ENST00000520230 SOGA1O94964 1423 aa24.15■■□□□ 1.46
NDRG1-214ENST00000520230 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
NDRG1-214ENST00000520230 FBLN2P98095 1184 aa24.12■■□□□ 1.45
NDRG1-214ENST00000520230 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
NDRG1-214ENST00000520230 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
NDRG1-214ENST00000520230 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
NDRG1-214ENST00000520230 FGD5Q6ZNL6 1462 aa24.1■■□□□ 1.45
NDRG1-214ENST00000520230 CHD1O14646 1710 aa24.09■■□□□ 1.45
NDRG1-214ENST00000520230 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
NDRG1-214ENST00000520230 CUX1P39880 1505 aa24.06■■□□□ 1.44
NDRG1-214ENST00000520230 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
NDRG1-214ENST00000520230 WDR97A6NE52 1622 aa24■■□□□ 1.43
NDRG1-214ENST00000520230 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
NDRG1-214ENST00000520230 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
NDRG1-214ENST00000520230 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
NDRG1-214ENST00000520230 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
NDRG1-214ENST00000520230 MAGI1Q96QZ7 1491 aaPredicted RBP23.89■■□□□ 1.42
NDRG1-214ENST00000520230 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
NDRG1-214ENST00000520230 PBRM1Q86U86 1689 aa23.84■■□□□ 1.41
NDRG1-214ENST00000520230 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
NDRG1-214ENST00000520230 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
NDRG1-214ENST00000520230 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
NDRG1-214ENST00000520230 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
NDRG1-214ENST00000520230 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
NDRG1-214ENST00000520230 CLASP1Q7Z460 1538 aa23.76■■□□□ 1.39
NDRG1-214ENST00000520230 ABCA5Q8WWZ7 1642 aa23.75■■□□□ 1.39
NDRG1-214ENST00000520230 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
NDRG1-214ENST00000520230 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
NDRG1-214ENST00000520230 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
NDRG1-214ENST00000520230 GRIN2AQ12879 1464 aa23.59■■□□□ 1.37
NDRG1-214ENST00000520230 ADAMTS12P58397 1594 aa23.59■■□□□ 1.37
NDRG1-214ENST00000520230 FHAD1B1AJZ9 1412 aa23.55■■□□□ 1.36
NDRG1-214ENST00000520230 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
NDRG1-214ENST00000520230 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
NDRG1-214ENST00000520230 NUP160Q12769 1436 aa23.47■■□□□ 1.35
NDRG1-214ENST00000520230 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
NDRG1-214ENST00000520230 SHROOM2Q13796 1616 aa23.36■■□□□ 1.33
NDRG1-214ENST00000520230 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
NDRG1-214ENST00000520230 JPH4Q96JJ6 628 aa23.3■■□□□ 1.32
NDRG1-214ENST00000520230 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
NDRG1-214ENST00000520230 RUSC2Q8N2Y8 1516 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms