Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 HLF-203ENST00000570962 1310 ntTSL 213.67□□□□□ -0.222e-6■□□□□ 10.2
HNRNPUQ00839 HLF-208ENST00000573945 2977 ntTSL 5 BASIC13.2□□□□□ -0.32e-6■□□□□ 10.2
HNRNPUQ00839 HLF-210ENST00000575345 3589 ntTSL 2 BASIC10.55□□□□□ -0.722e-6■□□□□ 10.2
HNRNPUQ00839 SEPT9-227ENST00000590059 670 ntTSL 527.31■■□□□ 1.962e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-245ENST00000592481 1291 ntTSL 527.3■■□□□ 1.962e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.732e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-219ENST00000588575 559 ntTSL 425.8■■□□□ 1.722e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.382e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.332e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC23.13■■□□□ 1.292e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-215ENST00000586521 601 ntTSL 423.03■■□□□ 1.282e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.03■■□□□ 1.122e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-221ENST00000588958 879 ntTSL 221.29■■□□□ 12e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.982e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC21.14■□□□□ 0.972e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.892e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC20■□□□□ 0.792e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-210ENST00000585929 906 ntTSL 419.36■□□□□ 0.692e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.46■□□□□ 0.552e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-212ENST00000586128 752 ntTSL 418.31■□□□□ 0.522e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.512e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC17.89■□□□□ 0.452e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.312e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC16.54■□□□□ 0.242e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC16.08■□□□□ 0.162e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-213ENST00000586433 569 ntTSL 416.07■□□□□ 0.162e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-238ENST00000591472 555 ntTSL 415.68■□□□□ 0.12e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-239ENST00000591704 749 ntTSL 214.79□□□□□ -0.042e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-247ENST00000593189 817 ntTSL 514.43□□□□□ -0.12e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-235ENST00000591020 582 ntTSL 414.35□□□□□ -0.112e-6■□□□□ 10.1
HNRNPUQ00839 SEPT9-234ENST00000590938 611 ntTSL 413.22□□□□□ -0.292e-6■□□□□ 10.1
HNRNPUQ00839 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.181e-8■□□□□ 10.1
HNRNPUQ00839 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.811e-8■□□□□ 10.1
HNRNPUQ00839 SH3BP5-204ENST00000412806 1900 ntTSL 529.43■■■□□ 2.36e-8■□□□□ 10.1
HNRNPUQ00839 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC23.66■■□□□ 1.386e-8■□□□□ 10.1
HNRNPUQ00839 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.326e-8■□□□□ 10.1
HNRNPUQ00839 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC23.21■■□□□ 1.316e-8■□□□□ 10.1
HNRNPUQ00839 SH3BP5-207ENST00000450625 763 ntTSL 320.37■□□□□ 0.856e-8■□□□□ 10.1
HNRNPUQ00839 SH3BP5-209ENST00000465894 532 ntTSL 517.85■□□□□ 0.456e-8■□□□□ 10.1
HNRNPUQ00839 EPB41-210ENST00000482464 675 ntTSL 222.33■■□□□ 1.175e-9■□□□□ 10.1
HNRNPUQ00839 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC14.55□□□□□ -0.085e-9■□□□□ 10.1
HNRNPUQ00839 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC14.22□□□□□ -0.135e-9■□□□□ 10.1
HNRNPUQ00839 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC12.68□□□□□ -0.385e-9■□□□□ 10.1
HNRNPUQ00839 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.415e-9■□□□□ 10.1
HNRNPUQ00839 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC12.07□□□□□ -0.485e-9■□□□□ 10.1
HNRNPUQ00839 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.815e-9■□□□□ 10.1
HNRNPUQ00839 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.07■□□□□ 0.85e-6■□□□□ 10.1
HNRNPUQ00839 SND1-209ENST00000470723 568 ntTSL 416.45■□□□□ 0.225e-6■□□□□ 10.1
HNRNPUQ00839 SND1-208ENST00000470463 530 ntTSL 414.79□□□□□ -0.045e-6■□□□□ 10.1
HNRNPUQ00839 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.15e-6■□□□□ 10.1
HNRNPUQ00839 SND1-211ENST00000484767 460 ntTSL 412.67□□□□□ -0.385e-6■□□□□ 10.1
HNRNPUQ00839 SND1-213ENST00000486037 695 ntTSL 312.54□□□□□ -0.45e-6■□□□□ 10.1
HNRNPUQ00839 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC26.55■■□□□ 1.843e-6■□□□□ 10
HNRNPUQ00839 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.57■■□□□ 1.523e-6■□□□□ 10
HNRNPUQ00839 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC24.52■■□□□ 1.523e-6■□□□□ 10
HNRNPUQ00839 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC18.87■□□□□ 0.613e-6■□□□□ 10
HNRNPUQ00839 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC12.43□□□□□ -0.423e-6■□□□□ 10
HNRNPUQ00839 RTN4-211ENST00000438462 656 ntTSL 511.41□□□□□ -0.583e-6■□□□□ 10
HNRNPUQ00839 RTN4-214ENST00000486085 955 ntTSL 39.63□□□□□ -0.873e-6■□□□□ 10
HNRNPUQ00839 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.55□□□□□ -0.883e-6■□□□□ 10
HNRNPUQ00839 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.913e-6■□□□□ 10
HNRNPUQ00839 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.33□□□□□ -1.563e-6■□□□□ 10
HNRNPUQ00839 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.99□□□□□ -1.613e-6■□□□□ 10
HNRNPUQ00839 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC28.38■■■□□ 2.133e-9■□□□□ 10
HNRNPUQ00839 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.553e-9■□□□□ 10
HNRNPUQ00839 UNKL-206ENST00000402641 669 ntTSL 322.52■■□□□ 1.23e-9■□□□□ 10
HNRNPUQ00839 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC21.33■■□□□ 13e-9■□□□□ 10
HNRNPUQ00839 UNKL-214ENST00000515195 481 ntTSL 419.93■□□□□ 0.783e-9■□□□□ 10
HNRNPUQ00839 UNKL-207ENST00000403703 4281 ntTSL 1 (best)18.53■□□□□ 0.563e-9■□□□□ 10
HNRNPUQ00839 UNKL-213ENST00000513783 582 ntTSL 418.32■□□□□ 0.523e-9■□□□□ 10
HNRNPUQ00839 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.353e-9■□□□□ 10
HNRNPUQ00839 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)25.6■■□□□ 1.692e-6■□□□□ 10
HNRNPUQ00839 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.478e-9■□□□□ 10
HNRNPUQ00839 NEAT1-202ENST00000501122 22743 ntBASIC6.21□□□□□ -1.427e-31■□□□□ 9.9
HNRNPUQ00839 OPLAH-201ENST00000527993 635 ntTSL 528.71■■■□□ 2.192e-8■□□□□ 9.9
HNRNPUQ00839 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.582e-8■□□□□ 9.9
HNRNPUQ00839 CORO1C-205ENST00000546571 899 ntTSL 418.25■□□□□ 0.512e-8■□□□□ 9.9
HNRNPUQ00839 OPLAH-202ENST00000531027 500 ntTSL 218.03■□□□□ 0.482e-8■□□□□ 9.9
HNRNPUQ00839 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.28■■□□□ 1.962e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-207ENST00000469491 2916 ntTSL 223.43■■□□□ 1.342e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.182e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.412e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.822e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-206ENST00000443501 678 ntTSL 39.85□□□□□ -0.832e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-208ENST00000476794 682 ntTSL 38.86□□□□□ -0.992e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.8□□□□□ -12e-7■□□□□ 9.9
HNRNPUQ00839 FNDC3B-209ENST00000478016 554 ntTSL 44.62□□□□□ -1.672e-7■□□□□ 9.9
HNRNPUQ00839 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.395e-9■□□□□ 9.8
HNRNPUQ00839 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.355e-9■□□□□ 9.8
HNRNPUQ00839 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.275e-9■□□□□ 9.8
HNRNPUQ00839 LSP1-211ENST00000451814 417 ntTSL 319.49■□□□□ 0.715e-9■□□□□ 9.8
HNRNPUQ00839 LSP1-207ENST00000421485 682 ntTSL 518.93■□□□□ 0.625e-9■□□□□ 9.8
HNRNPUQ00839 LSP1-210ENST00000446808 574 ntTSL 418.93■□□□□ 0.625e-9■□□□□ 9.8
HNRNPUQ00839 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.794e-7■□□□□ 9.8
HNRNPUQ00839 FOSL2-203ENST00000436647 889 ntTSL 217.62■□□□□ 0.414e-7■□□□□ 9.8
HNRNPUQ00839 FOSL2-204ENST00000460736 393 ntTSL 516.75■□□□□ 0.274e-7■□□□□ 9.8
HNRNPUQ00839 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC15.98■□□□□ 0.154e-7■□□□□ 9.8
HNRNPUQ00839 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.048e-6■□□□□ 9.8
HNRNPUQ00839 YIPF2-206ENST00000588347 753 ntTSL 227.37■■□□□ 1.978e-6■□□□□ 9.8
HNRNPUQ00839 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.898e-6■□□□□ 9.8
Retrieved 100 of 2,288 protein–RNA pairs in 51.6 ms