RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 NISCHQ9Y2I1 1504 aa38.21■■■■□ 3.71
LSP1-203ENST00000405957 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
LSP1-203ENST00000405957 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
LSP1-203ENST00000405957 ABCC9O60706 1549 aa32.13■■■□□ 2.73
LSP1-203ENST00000405957 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
LSP1-203ENST00000405957 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
LSP1-203ENST00000405957 MYO15BQ96JP2 1530 aa31.31■■■□□ 2.6
LSP1-203ENST00000405957 NACADO15069 1562 aa31.29■■■□□ 2.6
LSP1-203ENST00000405957 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
LSP1-203ENST00000405957 RB1CC1Q8TDY2 1594 aa31.17■■■□□ 2.58
LSP1-203ENST00000405957 SCRIBQ14160 1630 aa30.7■■■□□ 2.51
LSP1-203ENST00000405957 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
LSP1-203ENST00000405957 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
LSP1-203ENST00000405957 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.42
LSP1-203ENST00000405957 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
LSP1-203ENST00000405957 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
LSP1-203ENST00000405957 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
LSP1-203ENST00000405957 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
LSP1-203ENST00000405957 BAZ1AQ9NRL2 1556 aaPredicted RBP29.51■■■□□ 2.31
LSP1-203ENST00000405957 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
LSP1-203ENST00000405957 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
LSP1-203ENST00000405957 WIZO95785 1651 aa29.33■■■□□ 2.29
LSP1-203ENST00000405957 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
LSP1-203ENST00000405957 CC2D2AQ9P2K1 1620 aa29.08■■■□□ 2.25
LSP1-203ENST00000405957 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
LSP1-203ENST00000405957 TOP2AP11388 1531 aaKnown RBP29.05■■■□□ 2.24
LSP1-203ENST00000405957 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
LSP1-203ENST00000405957 SMARCA2P51531 1590 aa29■■■□□ 2.23
LSP1-203ENST00000405957 NCAPD3P42695 1498 aa28.87■■■□□ 2.21
LSP1-203ENST00000405957 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
LSP1-203ENST00000405957 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
LSP1-203ENST00000405957 HMGXB3Q12766 1538 aa28.81■■■□□ 2.2
LSP1-203ENST00000405957 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
LSP1-203ENST00000405957 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
LSP1-203ENST00000405957 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
LSP1-203ENST00000405957 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
LSP1-203ENST00000405957 CFTRP13569 1480 aa28.08■■■□□ 2.09
LSP1-203ENST00000405957 NESP48681 1621 aa28.04■■■□□ 2.08
LSP1-203ENST00000405957 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
LSP1-203ENST00000405957 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.07
LSP1-203ENST00000405957 LOC105371045A0A1W2PR82 267 aa27.95■■■□□ 2.06
LSP1-203ENST00000405957 PRDM2Q13029 1718 aa27.94■■■□□ 2.06
LSP1-203ENST00000405957 SYNJ1O43426 1573 aa27.91■■■□□ 2.06
LSP1-203ENST00000405957 FAM9AQ8IZU1 332 aaPredicted RBP27.85■■■□□ 2.05
LSP1-203ENST00000405957 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
LSP1-203ENST00000405957 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
LSP1-203ENST00000405957 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
LSP1-203ENST00000405957 EEA1Q15075 1411 aa27.78■■■□□ 2.04
LSP1-203ENST00000405957 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
LSP1-203ENST00000405957 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
LSP1-203ENST00000405957 SOGA1O94964 1423 aa27.69■■■□□ 2.02
LSP1-203ENST00000405957 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
LSP1-203ENST00000405957 ERCC6Q03468 1493 aa27.61■■■□□ 2.01
LSP1-203ENST00000405957 CUX1P39880 1505 aa27.6■■■□□ 2.01
LSP1-203ENST00000405957 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
LSP1-203ENST00000405957 URB2Q14146 1524 aaKnown RBP27.48■■□□□ 1.99
LSP1-203ENST00000405957 CSRNP3Q8WYN3 585 aa27.48■■□□□ 1.99
LSP1-203ENST00000405957 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
LSP1-203ENST00000405957 KIF21BO75037 1637 aa27.45■■□□□ 1.99
LSP1-203ENST00000405957 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
LSP1-203ENST00000405957 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
LSP1-203ENST00000405957 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
LSP1-203ENST00000405957 EHMT2Q96KQ7 1210 aa27.4■■□□□ 1.98
LSP1-203ENST00000405957 GOLGA3Q08378 1498 aa27.4■■□□□ 1.98
LSP1-203ENST00000405957 WDR62O43379 1518 aa27.36■■□□□ 1.97
LSP1-203ENST00000405957 TNIKQ9UKE5 1360 aa27.33■■□□□ 1.97
LSP1-203ENST00000405957 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
LSP1-203ENST00000405957 PCGF6Q9BYE7 350 aa27.3■■□□□ 1.96
LSP1-203ENST00000405957 POLA1P09884 1462 aaPredicted RBP27.26■■□□□ 1.95
LSP1-203ENST00000405957 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
LSP1-203ENST00000405957 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
LSP1-203ENST00000405957 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
LSP1-203ENST00000405957 ERICH3Q5RHP9 1530 aa27.2■■□□□ 1.94
LSP1-203ENST00000405957 PRXQ9BXM0 1461 aa27.15■■□□□ 1.94
LSP1-203ENST00000405957 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
LSP1-203ENST00000405957 RAPGEF2Q9Y4G8 1499 aa27.15■■□□□ 1.94
LSP1-203ENST00000405957 CUX2O14529 1486 aa27.14■■□□□ 1.94
LSP1-203ENST00000405957 UBTFP17480 764 aaKnown RBP27.13■■□□□ 1.93
LSP1-203ENST00000405957 HRCP23327 699 aa27.12■■□□□ 1.93
LSP1-203ENST00000405957 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.92
LSP1-203ENST00000405957 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
LSP1-203ENST00000405957 WDR97A6NE52 1622 aa27.04■■□□□ 1.92
LSP1-203ENST00000405957 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
LSP1-203ENST00000405957 TDRD9Q8NDG6 1382 aaKnown RBP26.94■■□□□ 1.9
LSP1-203ENST00000405957 CLIP1P30622 1438 aa26.94■■□□□ 1.9
LSP1-203ENST00000405957 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
LSP1-203ENST00000405957 IGF1RP08069 1367 aa26.92■■□□□ 1.9
LSP1-203ENST00000405957 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.9
LSP1-203ENST00000405957 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.89
LSP1-203ENST00000405957 GAPVD1Q14C86 1478 aa26.85■■□□□ 1.89
LSP1-203ENST00000405957 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
LSP1-203ENST00000405957 CUL7Q14999 1698 aa26.84■■□□□ 1.89
LSP1-203ENST00000405957 CARMIL1Q5VZK9 1371 aa26.8■■□□□ 1.88
LSP1-203ENST00000405957 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
LSP1-203ENST00000405957 PBRM1Q86U86 1689 aa26.76■■□□□ 1.88
LSP1-203ENST00000405957 GRIN2BQ13224 1484 aa26.72■■□□□ 1.87
LSP1-203ENST00000405957 ARAP1Q96P48 1450 aa26.67■■□□□ 1.86
LSP1-203ENST00000405957 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
LSP1-203ENST00000405957 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
LSP1-203ENST00000405957 ZEB1P37275 1124 aaPredicted RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms