RNA–Protein interactions for RNA: ENST00000588575.1

SEPT9-219, Transcript of septin 9, humanhuman

TSL 4

Gene SEPT9, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-219ENST00000588575 NISCHQ9Y2I1 1504 aa50.21■■■■■ 5.63
SEPT9-219ENST00000588575 CCDC180Q9P1Z9 1646 aa44.79■■■■■ 4.76
SEPT9-219ENST00000588575 ABCC9O60706 1549 aa44.09■■■■■ 4.65
SEPT9-219ENST00000588575 RB1CC1Q8TDY2 1594 aa42.29■■■■■ 4.36
SEPT9-219ENST00000588575 NACADO15069 1562 aa42.17■■■■■ 4.34
SEPT9-219ENST00000588575 DCAF8L2P0C7V8 631 aa42.05■■■■■ 4.32
SEPT9-219ENST00000588575 MYO15BQ96JP2 1530 aa41.83■■■■■ 4.29
SEPT9-219ENST00000588575 ZCCHC6Q5VYS8 1495 aaKnown RBP41.75■■■■■ 4.27
SEPT9-219ENST00000588575 DCAF1Q9Y4B6 1507 aa41.54■■■■■ 4.24
SEPT9-219ENST00000588575 UNC13AQ9UPW8 1703 aa41.39■■■■■ 4.22
SEPT9-219ENST00000588575 PABPN1Q86U42 306 aaKnown RBP eCLIP41.15■■■■■ 4.18
SEPT9-219ENST00000588575 BICRAQ9NZM4 1560 aa41.05■■■■■ 4.16
SEPT9-219ENST00000588575 SCRIBQ14160 1630 aa40.82■■■■■ 4.12
SEPT9-219ENST00000588575 DNAJC5BQ9UF47 199 aa40.79■■■■■ 4.12
SEPT9-219ENST00000588575 SHROOM4Q9ULL8 1493 aa40.56■■■■■ 4.08
SEPT9-219ENST00000588575 EIF4G1Q04637 1599 aaKnown RBP39.97■■■■□ 3.99
SEPT9-219ENST00000588575 CC2D2AQ9P2K1 1620 aa39.89■■■■□ 3.98
SEPT9-219ENST00000588575 CECR2Q9BXF3 1484 aa39.65■■■■□ 3.94
SEPT9-219ENST00000588575 SMARCA4P51532 1647 aa39.03■■■■□ 3.84
SEPT9-219ENST00000588575 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
SEPT9-219ENST00000588575 BAZ1AQ9NRL2 1556 aaPredicted RBP38.92■■■■□ 3.82
SEPT9-219ENST00000588575 ATAD2BQ9ULI0 1458 aa38.89■■■■□ 3.82
SEPT9-219ENST00000588575 SMARCA2P51531 1590 aa38.82■■■■□ 3.81
SEPT9-219ENST00000588575 MROH2BQ7Z745 1585 aa38.7■■■■□ 3.79
SEPT9-219ENST00000588575 HMGXB3Q12766 1538 aa38.69■■■■□ 3.78
SEPT9-219ENST00000588575 PEG3Q9GZU2 1588 aa38.66■■■■□ 3.78
SEPT9-219ENST00000588575 BAZ1BQ9UIG0 1483 aaKnown RBP38.54■■■■□ 3.76
SEPT9-219ENST00000588575 WIZO95785 1651 aa38.27■■■■□ 3.72
SEPT9-219ENST00000588575 RSF1Q96T23 1441 aaPredicted RBP38.13■■■■□ 3.7
SEPT9-219ENST00000588575 NESP48681 1621 aa38.08■■■■□ 3.69
SEPT9-219ENST00000588575 ERCC6Q03468 1493 aa38.01■■■■□ 3.67
SEPT9-219ENST00000588575 LAMC3Q9Y6N6 1575 aa37.94■■■■□ 3.66
SEPT9-219ENST00000588575 TOP2AP11388 1531 aaKnown RBP37.82■■■■□ 3.65
SEPT9-219ENST00000588575 CADPSQ9ULU8 1353 aa37.76■■■■□ 3.64
SEPT9-219ENST00000588575 CUX2O14529 1486 aa37.74■■■■□ 3.63
SEPT9-219ENST00000588575 PDS5BQ9NTI5 1447 aa37.69■■■■□ 3.62
SEPT9-219ENST00000588575 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
SEPT9-219ENST00000588575 THOC2Q8NI27 1593 aaKnown RBP37.57■■■■□ 3.6
SEPT9-219ENST00000588575 CFTRP13569 1480 aa37.48■■■■□ 3.59
SEPT9-219ENST00000588575 CCDC88BA6NC98 1476 aa37.39■■■■□ 3.58
SEPT9-219ENST00000588575 FANCD2Q9BXW9 1451 aa37.32■■■■□ 3.56
SEPT9-219ENST00000588575 MRC2Q9UBG0 1479 aa37.31■■■■□ 3.56
SEPT9-219ENST00000588575 CEP164Q9UPV0 1460 aa37.3■■■■□ 3.56
SEPT9-219ENST00000588575 PRDM2Q13029 1718 aa37.21■■■■□ 3.55
SEPT9-219ENST00000588575 WDR62O43379 1518 aa37.2■■■■□ 3.55
SEPT9-219ENST00000588575 URB2Q14146 1524 aaKnown RBP36.98■■■■□ 3.51
SEPT9-219ENST00000588575 DNAJC5Q9H3Z4 198 aa36.97■■■■□ 3.51
SEPT9-219ENST00000588575 SUPT5HO00267 1087 aaKnown RBP36.92■■■■□ 3.5
SEPT9-219ENST00000588575 TOPBP1Q92547 1522 aa36.7■■■■□ 3.47
SEPT9-219ENST00000588575 ABCC8Q09428 1581 aa36.68■■■■□ 3.46
SEPT9-219ENST00000588575 DNMBPQ6XZF7 1577 aa36.63■■■■□ 3.45
SEPT9-219ENST00000588575 IFT140Q96RY7 1462 aa36.54■■■■□ 3.44
SEPT9-219ENST00000588575 ZNF608Q9ULD9 1512 aaPredicted RBP36.41■■■■□ 3.42
SEPT9-219ENST00000588575 POLA1P09884 1462 aaPredicted RBP36.37■■■■□ 3.41
SEPT9-219ENST00000588575 TARBP1Q13395 1621 aaKnown RBP36.34■■■■□ 3.41
SEPT9-219ENST00000588575 CUX1P39880 1505 aa36.31■■■■□ 3.4
SEPT9-219ENST00000588575 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
SEPT9-219ENST00000588575 FGD5Q6ZNL6 1462 aa36.23■■■■□ 3.39
SEPT9-219ENST00000588575 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
SEPT9-219ENST00000588575 SOGA1O94964 1423 aa36.21■■■■□ 3.39
SEPT9-219ENST00000588575 AQRO60306 1485 aaKnown RBP eCLIP36.17■■■■□ 3.383e-7■■□□□ 14.1
SEPT9-219ENST00000588575 OSCARQ8IYS5 282 aa36.13■■■■□ 3.37
SEPT9-219ENST00000588575 TDRD9Q8NDG6 1382 aaKnown RBP36.04■■■■□ 3.36
SEPT9-219ENST00000588575 WDR97A6NE52 1622 aa36.02■■■■□ 3.36
SEPT9-219ENST00000588575 WRNQ14191 1432 aaPredicted RBP eCLIP35.95■■■■□ 3.358e-8■■■■■ 37.6
SEPT9-219ENST00000588575 BIVM-ERCC5R4GMW8 1640 aa35.94■■■■□ 3.34
SEPT9-219ENST00000588575 TOP2BQ02880 1626 aa35.93■■■■□ 3.34
SEPT9-219ENST00000588575 SYNJ1O43426 1573 aa35.89■■■■□ 3.34
SEPT9-219ENST00000588575 CHD1O14646 1710 aa35.88■■■■□ 3.33
SEPT9-219ENST00000588575 ABCA10Q8WWZ4 1543 aa35.88■■■■□ 3.33
SEPT9-219ENST00000588575 GRIN2BQ13224 1484 aa35.82■■■■□ 3.32
SEPT9-219ENST00000588575 SNAPC4Q5SXM2 1469 aa35.8■■■■□ 3.32
SEPT9-219ENST00000588575 GAPVD1Q14C86 1478 aa35.79■■■■□ 3.32
SEPT9-219ENST00000588575 FBLN2P98095 1184 aa35.77■■■■□ 3.32
SEPT9-219ENST00000588575 ABCA5Q8WWZ7 1642 aa35.76■■■■□ 3.32
SEPT9-219ENST00000588575 MAGI1Q96QZ7 1491 aaPredicted RBP35.76■■■■□ 3.32
SEPT9-219ENST00000588575 PBRM1Q86U86 1689 aa35.75■■■■□ 3.31
SEPT9-219ENST00000588575 CHMP7Q8WUX9 453 aaPredicted RBP35.64■■■■□ 3.3
SEPT9-219ENST00000588575 SYNJ2O15056 1496 aa35.62■■■■□ 3.29
SEPT9-219ENST00000588575 RIMBP3CA6NJZ7 1639 aa35.6■■■■□ 3.29
SEPT9-219ENST00000588575 RIMBP3BA6NNM3 1639 aa35.6■■■■□ 3.29
SEPT9-219ENST00000588575 RIMBP3Q9UFD9 1639 aa35.6■■■■□ 3.29
SEPT9-219ENST00000588575 TRIM41Q8WV44 630 aa35.58■■■■□ 3.29
SEPT9-219ENST00000588575 ARHGEF11O15085 1522 aa35.54■■■■□ 3.28
SEPT9-219ENST00000588575 CLASP1Q7Z460 1538 aa35.47■■■■□ 3.27
SEPT9-219ENST00000588575 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
SEPT9-219ENST00000588575 ERICH3Q5RHP9 1530 aa35.43■■■■□ 3.26
SEPT9-219ENST00000588575 FHAD1B1AJZ9 1412 aa35.36■■■■□ 3.25
SEPT9-219ENST00000588575 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
SEPT9-219ENST00000588575 ARAP1Q96P48 1450 aa35.23■■■■□ 3.23
SEPT9-219ENST00000588575 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
SEPT9-219ENST00000588575 KIF27Q86VH2 1401 aa35.23■■■■□ 3.23
SEPT9-219ENST00000588575 NUP160Q12769 1436 aa35.22■■■■□ 3.23
SEPT9-219ENST00000588575 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
SEPT9-219ENST00000588575 IGF1RP08069 1367 aa35.14■■■■□ 3.22
SEPT9-219ENST00000588575 CUL7Q14999 1698 aa35.05■■■■□ 3.2
SEPT9-219ENST00000588575 SHROOM2Q13796 1616 aa35.01■■■■□ 3.19
SEPT9-219ENST00000588575 ERCC6L2Q5T890 1561 aa34.96■■■■□ 3.19
SEPT9-219ENST00000588575 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
SEPT9-219ENST00000588575 CARMIL1Q5VZK9 1371 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms