RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
FNDC3B-209ENST00000478016 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
FNDC3B-209ENST00000478016 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
FNDC3B-209ENST00000478016 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
FNDC3B-209ENST00000478016 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.57
FNDC3B-209ENST00000478016 FOXD1Q16676 465 aa11.29□□□□□ -0.6
FNDC3B-209ENST00000478016 ADRA2BP18089 450 aa10.89□□□□□ -0.67
FNDC3B-209ENST00000478016 PPP6R1Q9UPN7 881 aa10.88□□□□□ -0.67
FNDC3B-209ENST00000478016 PIAS4Q8N2W9 510 aaPredicted RBP10.68□□□□□ -0.7
FNDC3B-209ENST00000478016 MSH5O43196 834 aa10.43□□□□□ -0.74
FNDC3B-209ENST00000478016 PPP4R3CPQ6ZMV5 832 aa10.09□□□□□ -0.79
FNDC3B-209ENST00000478016 SCAF1Q9H7N4 1312 aaKnown RBP10.01□□□□□ -0.81
FNDC3B-209ENST00000478016 KCNA4P22459 653 aa9.89□□□□□ -0.83
FNDC3B-209ENST00000478016 NCBP3Q53F19 620 aaKnown RBP9.87□□□□□ -0.83
FNDC3B-209ENST00000478016 MAPK8IP2Q13387 824 aaPredicted RBP9.85□□□□□ -0.83
FNDC3B-209ENST00000478016 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
FNDC3B-209ENST00000478016 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
FNDC3B-209ENST00000478016 NPM3O75607 178 aaKnown RBP9.68□□□□□ -0.86
FNDC3B-209ENST00000478016 RNF216Q9NWF9 866 aaPredicted RBP9.61□□□□□ -0.87
FNDC3B-209ENST00000478016 HOXD11P31277 338 aaPredicted RBP9.55□□□□□ -0.88
FNDC3B-209ENST00000478016 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
FNDC3B-209ENST00000478016 DNAJC5BQ9UF47 199 aa9.42□□□□□ -0.9
FNDC3B-209ENST00000478016 POTEDQ86YR6 584 aa9.4□□□□□ -0.9
FNDC3B-209ENST00000478016 DCAF8L1A6NGE4 600 aa9.32□□□□□ -0.92
FNDC3B-209ENST00000478016 EHMT2Q96KQ7 1210 aa9.21□□□□□ -0.94
FNDC3B-209ENST00000478016 SLC4A2P04920 1241 aa9.13□□□□□ -0.95
FNDC3B-209ENST00000478016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.11□□□□□ -0.952e-13■□□□□ 10.4
FNDC3B-209ENST00000478016 FOXD4L1Q9NU39 408 aa9.1□□□□□ -0.95
FNDC3B-209ENST00000478016 ZBTB22O15209 634 aa9.09□□□□□ -0.95
FNDC3B-209ENST00000478016 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
FNDC3B-209ENST00000478016 MYCNP04198 464 aaPredicted RBP8.97□□□□□ -0.97
FNDC3B-209ENST00000478016 U3KPZ7 1027 aaPredicted RBP8.95□□□□□ -0.98
FNDC3B-209ENST00000478016 RNF39Q9H2S5 420 aa8.93□□□□□ -0.98
FNDC3B-209ENST00000478016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.9□□□□□ -0.98
FNDC3B-209ENST00000478016 HNRNPUL2Q1KMD3 747 aaKnown RBP8.9□□□□□ -0.98
FNDC3B-209ENST00000478016 SAMD1Q6SPF0 538 aaPredicted RBP8.86□□□□□ -0.99
FNDC3B-209ENST00000478016 C1QBPQ07021 282 aaKnown RBP8.84□□□□□ -0.99
FNDC3B-209ENST00000478016 ATXN8OSP0DMR3 200 aa8.8□□□□□ -1
FNDC3B-209ENST00000478016 APLP2Q06481 763 aa8.8□□□□□ -1
FNDC3B-209ENST00000478016 SPINK5Q9NQ38 1064 aaPredicted RBP8.68□□□□□ -1.02
FNDC3B-209ENST00000478016 ATF5Q9Y2D1 282 aaPredicted RBP8.68□□□□□ -1.02
FNDC3B-209ENST00000478016 CACNB1Q02641 598 aaPredicted RBP8.67□□□□□ -1.02
FNDC3B-209ENST00000478016 CAPN15O75808 1086 aa8.66□□□□□ -1.02
FNDC3B-209ENST00000478016 ZNF219Q9P2Y4 722 aaPredicted RBP8.65□□□□□ -1.02
FNDC3B-209ENST00000478016 TRHP20396 242 aaPredicted RBP8.63□□□□□ -1.03
FNDC3B-209ENST00000478016 DSG3P32926 999 aa8.5□□□□□ -1.05
FNDC3B-209ENST00000478016 POLA2Q14181 598 aa8.5□□□□□ -1.05
FNDC3B-209ENST00000478016 ABCB7O75027 752 aa8.49□□□□□ -1.05
FNDC3B-209ENST00000478016 ZBTB12Q9Y330 459 aaPredicted RBP8.4□□□□□ -1.06
FNDC3B-209ENST00000478016 FBLN2P98095 1184 aa8.37□□□□□ -1.07
FNDC3B-209ENST00000478016 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
FNDC3B-209ENST00000478016 FKBP8Q14318 412 aa8.21□□□□□ -1.1
FNDC3B-209ENST00000478016 OSCARQ8IYS5 282 aa8.21□□□□□ -1.1
FNDC3B-209ENST00000478016 SPDYE4A6NLX3 237 aa8.18□□□□□ -1.1
FNDC3B-209ENST00000478016 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
FNDC3B-209ENST00000478016 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
FNDC3B-209ENST00000478016 SPDYE2Q495Y8 402 aa8.16□□□□□ -1.1
FNDC3B-209ENST00000478016 RBM42Q9BTD8 480 aaKnown RBP8.13□□□□□ -1.11
FNDC3B-209ENST00000478016 ZNF692Q9BU19 519 aaPredicted RBP8.12□□□□□ -1.11
FNDC3B-209ENST00000478016 SSUH2Q9Y2M2 353 aa8.09□□□□□ -1.11
FNDC3B-209ENST00000478016 PROM2Q8N271 834 aa8.04□□□□□ -1.12
FNDC3B-209ENST00000478016 AKT1S1Q96B36 256 aa8.03□□□□□ -1.12
FNDC3B-209ENST00000478016 PABPN1Q86U42 306 aaKnown RBP eCLIP8.01□□□□□ -1.13
FNDC3B-209ENST00000478016 REM2Q8IYK8 340 aaPredicted RBP7.94□□□□□ -1.14
FNDC3B-209ENST00000478016 FBXO3Q9UK99 471 aa7.94□□□□□ -1.14
FNDC3B-209ENST00000478016 SPDYE1Q8NFV5 336 aaPredicted RBP7.91□□□□□ -1.14
FNDC3B-209ENST00000478016 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
FNDC3B-209ENST00000478016 PITPNM1O00562 1244 aa7.85□□□□□ -1.15
FNDC3B-209ENST00000478016 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
FNDC3B-209ENST00000478016 VASPP50552 380 aaPredicted RBP7.82□□□□□ -1.16
FNDC3B-209ENST00000478016 PRR29P0C7W0 189 aa7.8□□□□□ -1.16
FNDC3B-209ENST00000478016 CHRDL2Q6WN34 429 aa7.76□□□□□ -1.17
FNDC3B-209ENST00000478016 PLCD3Q8N3E9 789 aa7.76□□□□□ -1.17
FNDC3B-209ENST00000478016 MIER1Q8N108 512 aa7.75□□□□□ -1.17
FNDC3B-209ENST00000478016 PLEKHG5O94827 1062 aa7.74□□□□□ -1.17
FNDC3B-209ENST00000478016 FXR2P51116 673 aaKnown RBP eCLIP7.69□□□□□ -1.18
FNDC3B-209ENST00000478016 IFNLR1Q8IU57 520 aaPredicted RBP7.69□□□□□ -1.18
FNDC3B-209ENST00000478016 CREBZFQ9NS37 354 aa7.69□□□□□ -1.18
FNDC3B-209ENST00000478016 ZBTB47Q9UFB7 747 aaPredicted RBP7.68□□□□□ -1.18
FNDC3B-209ENST00000478016 KLHL34Q8N239 644 aa7.67□□□□□ -1.18
FNDC3B-209ENST00000478016 PIP4P2Q8N4L2 257 aa7.66□□□□□ -1.18
FNDC3B-209ENST00000478016 PRKAR2AP13861 404 aaKnown RBP7.65□□□□□ -1.18
FNDC3B-209ENST00000478016 CHADLQ6NUI6 762 aa7.63□□□□□ -1.19
FNDC3B-209ENST00000478016 SPOCK2Q92563 424 aa7.62□□□□□ -1.19
FNDC3B-209ENST00000478016 MNX1P50219 401 aaPredicted RBP7.61□□□□□ -1.19
FNDC3B-209ENST00000478016 NPM1P06748 294 aaKnown RBP eCLIP7.6□□□□□ -1.19
FNDC3B-209ENST00000478016 FARP1Q9Y4F1 1045 aaPredicted RBP7.6□□□□□ -1.19
FNDC3B-209ENST00000478016 AMER1Q5JTC6 1135 aaPredicted RBP7.58□□□□□ -1.2
FNDC3B-209ENST00000478016 NUBP1P53384 320 aa7.54□□□□□ -1.2
FNDC3B-209ENST00000478016 RTN4Q9NQC3 1192 aaKnown RBP7.52□□□□□ -1.21
FNDC3B-209ENST00000478016 FAM212AQ96EL1 285 aa7.5□□□□□ -1.21
FNDC3B-209ENST00000478016 GSE1Q14687 1217 aa7.49□□□□□ -1.21
FNDC3B-209ENST00000478016 RASEFQ8IZ41 740 aa7.49□□□□□ -1.21
FNDC3B-209ENST00000478016 CIZ1Q9ULV3 898 aaPredicted RBP7.48□□□□□ -1.21
FNDC3B-209ENST00000478016 DCAF8Q5TAQ9 597 aa7.47□□□□□ -1.21
FNDC3B-209ENST00000478016 PAK3O75914 559 aaPredicted RBP7.46□□□□□ -1.22
FNDC3B-209ENST00000478016 POTEHQ6S545 545 aa7.46□□□□□ -1.22
FNDC3B-209ENST00000478016 PKD2Q13563 968 aa7.45□□□□□ -1.22
FNDC3B-209ENST00000478016 TSPYL2Q9H2G4 693 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-209ENST00000478016 CD44P16070 742 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 270.5 ms