RNA–Protein interactions for RNA: ENST00000329047.12

SEPT9-201, Transcript of septin 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEPT9, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-201ENST00000329047 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
SEPT9-201ENST00000329047 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
SEPT9-201ENST00000329047 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
SEPT9-201ENST00000329047 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
SEPT9-201ENST00000329047 PCGF6Q9BYE7 350 aa19.9■□□□□ 0.78
SEPT9-201ENST00000329047 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
SEPT9-201ENST00000329047 HRCP23327 699 aa19.6■□□□□ 0.73
SEPT9-201ENST00000329047 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
SEPT9-201ENST00000329047 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
SEPT9-201ENST00000329047 MYT1Q01538 1121 aa19.41■□□□□ 0.7
SEPT9-201ENST00000329047 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
SEPT9-201ENST00000329047 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
SEPT9-201ENST00000329047 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
SEPT9-201ENST00000329047 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
SEPT9-201ENST00000329047 CENPBP07199 599 aaPredicted RBP19.16■□□□□ 0.66
SEPT9-201ENST00000329047 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
SEPT9-201ENST00000329047 TRIM26Q12899 539 aaPredicted RBP19.14■□□□□ 0.65
SEPT9-201ENST00000329047 ABCC9O60706 1549 aa18.95■□□□□ 0.62
SEPT9-201ENST00000329047 TTBK1Q5TCY1 1321 aaPredicted RBP18.94■□□□□ 0.62
SEPT9-201ENST00000329047 ZCCHC6Q5VYS8 1495 aaKnown RBP18.91■□□□□ 0.62
SEPT9-201ENST00000329047 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
SEPT9-201ENST00000329047 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
SEPT9-201ENST00000329047 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
SEPT9-201ENST00000329047 APLP2Q06481 763 aa18.61■□□□□ 0.57
SEPT9-201ENST00000329047 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
SEPT9-201ENST00000329047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
SEPT9-201ENST00000329047 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
SEPT9-201ENST00000329047 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
SEPT9-201ENST00000329047 CCDC180Q9P1Z9 1646 aa18.48■□□□□ 0.55
SEPT9-201ENST00000329047 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
SEPT9-201ENST00000329047 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
SEPT9-201ENST00000329047 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.53
SEPT9-201ENST00000329047 NEFLP07196 543 aa18.29■□□□□ 0.52
SEPT9-201ENST00000329047 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
SEPT9-201ENST00000329047 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
SEPT9-201ENST00000329047 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
SEPT9-201ENST00000329047 ACIN1Q9UKV3 1341 aaKnown RBP18.16■□□□□ 0.5
SEPT9-201ENST00000329047 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
SEPT9-201ENST00000329047 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
SEPT9-201ENST00000329047 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
SEPT9-201ENST00000329047 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
SEPT9-201ENST00000329047 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
SEPT9-201ENST00000329047 ITGAEP38570 1179 aa17.87■□□□□ 0.45
SEPT9-201ENST00000329047 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
SEPT9-201ENST00000329047 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
SEPT9-201ENST00000329047 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
SEPT9-201ENST00000329047 CEP162Q5TB80 1403 aa17.67■□□□□ 0.42
SEPT9-201ENST00000329047 MIER1Q8N108 512 aa17.66■□□□□ 0.42
SEPT9-201ENST00000329047 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.4
SEPT9-201ENST00000329047 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
SEPT9-201ENST00000329047 CLSPNQ9HAW4 1339 aa17.56■□□□□ 0.4
SEPT9-201ENST00000329047 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
SEPT9-201ENST00000329047 BCANQ96GW7 911 aa17.53■□□□□ 0.4
SEPT9-201ENST00000329047 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.39
SEPT9-201ENST00000329047 SOGA1O94964 1423 aa17.48■□□□□ 0.39
SEPT9-201ENST00000329047 NACADO15069 1562 aa17.47■□□□□ 0.39
SEPT9-201ENST00000329047 CLIP1P30622 1438 aa17.46■□□□□ 0.39
SEPT9-201ENST00000329047 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
SEPT9-201ENST00000329047 EEA1Q15075 1411 aa17.45■□□□□ 0.38
SEPT9-201ENST00000329047 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
SEPT9-201ENST00000329047 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
SEPT9-201ENST00000329047 CDK11AQ9UQ88 783 aaPredicted RBP17.41■□□□□ 0.38
SEPT9-201ENST00000329047 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
SEPT9-201ENST00000329047 BAZ1AQ9NRL2 1556 aaPredicted RBP17.39■□□□□ 0.37
SEPT9-201ENST00000329047 WIZO95785 1651 aa17.38■□□□□ 0.37
SEPT9-201ENST00000329047 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.378e-8■■■■■ 37.6
SEPT9-201ENST00000329047 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
SEPT9-201ENST00000329047 ANP32CO43423 234 aa17.27■□□□□ 0.36
SEPT9-201ENST00000329047 DDX10Q13206 875 aaKnown RBP17.26■□□□□ 0.35
SEPT9-201ENST00000329047 FKBP8Q14318 412 aa17.25■□□□□ 0.35
SEPT9-201ENST00000329047 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
SEPT9-201ENST00000329047 MYT1LQ9UL68 1186 aa17.25■□□□□ 0.35
SEPT9-201ENST00000329047 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
SEPT9-201ENST00000329047 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
SEPT9-201ENST00000329047 POLR3GLQ9BT43 218 aa17.17■□□□□ 0.34
SEPT9-201ENST00000329047 SUPT16HQ9Y5B9 1047 aaKnown RBP17.16■□□□□ 0.34
SEPT9-201ENST00000329047 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
SEPT9-201ENST00000329047 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
SEPT9-201ENST00000329047 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
SEPT9-201ENST00000329047 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
SEPT9-201ENST00000329047 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
SEPT9-201ENST00000329047 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
SEPT9-201ENST00000329047 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
SEPT9-201ENST00000329047 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
SEPT9-201ENST00000329047 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
SEPT9-201ENST00000329047 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
SEPT9-201ENST00000329047 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.312e-6■□□□□ 10.1
SEPT9-201ENST00000329047 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
SEPT9-201ENST00000329047 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
SEPT9-201ENST00000329047 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
SEPT9-201ENST00000329047 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
SEPT9-201ENST00000329047 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
SEPT9-201ENST00000329047 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
SEPT9-201ENST00000329047 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
SEPT9-201ENST00000329047 EIF5BO60841 1220 aaKnown RBP16.93■□□□□ 0.3
SEPT9-201ENST00000329047 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
SEPT9-201ENST00000329047 BCL11AQ9H165 835 aa16.91■□□□□ 0.3
SEPT9-201ENST00000329047 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
SEPT9-201ENST00000329047 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
SEPT9-201ENST00000329047 KCNH8Q96L42 1107 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms