RNA–Protein interactions for RNA: ENST00000590294.5

SEPT9-228, Transcript of septin 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEPT9, Length 2,816 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-228ENST00000590294 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
SEPT9-228ENST00000590294 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
SEPT9-228ENST00000590294 CCDC180Q9P1Z9 1646 aa28.19■■■□□ 2.1
SEPT9-228ENST00000590294 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
SEPT9-228ENST00000590294 ABCC9O60706 1549 aa27.61■■■□□ 2.01
SEPT9-228ENST00000590294 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
SEPT9-228ENST00000590294 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
SEPT9-228ENST00000590294 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.86
SEPT9-228ENST00000590294 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
SEPT9-228ENST00000590294 NACADO15069 1562 aa26.43■■□□□ 1.82
SEPT9-228ENST00000590294 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
SEPT9-228ENST00000590294 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
SEPT9-228ENST00000590294 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
SEPT9-228ENST00000590294 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
SEPT9-228ENST00000590294 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
SEPT9-228ENST00000590294 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
SEPT9-228ENST00000590294 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
SEPT9-228ENST00000590294 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
SEPT9-228ENST00000590294 WIZO95785 1651 aa25.44■■□□□ 1.66
SEPT9-228ENST00000590294 BAZ1AQ9NRL2 1556 aaPredicted RBP25.28■■□□□ 1.64
SEPT9-228ENST00000590294 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
SEPT9-228ENST00000590294 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
SEPT9-228ENST00000590294 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
SEPT9-228ENST00000590294 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
SEPT9-228ENST00000590294 EHMT2Q96KQ7 1210 aa24.9■■□□□ 1.58
SEPT9-228ENST00000590294 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
SEPT9-228ENST00000590294 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
SEPT9-228ENST00000590294 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
SEPT9-228ENST00000590294 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.57
SEPT9-228ENST00000590294 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
SEPT9-228ENST00000590294 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
SEPT9-228ENST00000590294 HRCP23327 699 aa24.79■■□□□ 1.56
SEPT9-228ENST00000590294 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
SEPT9-228ENST00000590294 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
SEPT9-228ENST00000590294 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
SEPT9-228ENST00000590294 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
SEPT9-228ENST00000590294 ABCC8Q09428 1581 aa24.58■■□□□ 1.53
SEPT9-228ENST00000590294 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
SEPT9-228ENST00000590294 PCGF6Q9BYE7 350 aa24.45■■□□□ 1.5
SEPT9-228ENST00000590294 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
SEPT9-228ENST00000590294 PPARGC1BQ86YN6 1023 aaKnown RBP24.28■■□□□ 1.48
SEPT9-228ENST00000590294 NESP48681 1621 aa24.25■■□□□ 1.47
SEPT9-228ENST00000590294 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.468e-8■■■■■ 37.6
SEPT9-228ENST00000590294 SOGA1O94964 1423 aa24.16■■□□□ 1.46
SEPT9-228ENST00000590294 RUSC2Q8N2Y8 1516 aa24.13■■□□□ 1.45
SEPT9-228ENST00000590294 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
SEPT9-228ENST00000590294 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
SEPT9-228ENST00000590294 CFTRP13569 1480 aa24.08■■□□□ 1.45
SEPT9-228ENST00000590294 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
SEPT9-228ENST00000590294 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
SEPT9-228ENST00000590294 CUX1P39880 1505 aa23.89■■□□□ 1.41
SEPT9-228ENST00000590294 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
SEPT9-228ENST00000590294 CSRNP3Q8WYN3 585 aa23.87■■□□□ 1.41
SEPT9-228ENST00000590294 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
SEPT9-228ENST00000590294 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
SEPT9-228ENST00000590294 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
SEPT9-228ENST00000590294 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.39
SEPT9-228ENST00000590294 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
SEPT9-228ENST00000590294 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
SEPT9-228ENST00000590294 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
SEPT9-228ENST00000590294 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
SEPT9-228ENST00000590294 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
SEPT9-228ENST00000590294 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
SEPT9-228ENST00000590294 CUX2O14529 1486 aa23.61■■□□□ 1.37
SEPT9-228ENST00000590294 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
SEPT9-228ENST00000590294 TOPBP1Q92547 1522 aa23.58■■□□□ 1.37
SEPT9-228ENST00000590294 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
SEPT9-228ENST00000590294 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
SEPT9-228ENST00000590294 RAPGEF2Q9Y4G8 1499 aa23.55■■□□□ 1.36
SEPT9-228ENST00000590294 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
SEPT9-228ENST00000590294 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
SEPT9-228ENST00000590294 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
SEPT9-228ENST00000590294 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
SEPT9-228ENST00000590294 EEA1Q15075 1411 aa23.44■■□□□ 1.34
SEPT9-228ENST00000590294 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
SEPT9-228ENST00000590294 IGF1RP08069 1367 aa23.42■■□□□ 1.34
SEPT9-228ENST00000590294 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
SEPT9-228ENST00000590294 GOLGA3Q08378 1498 aa23.4■■□□□ 1.34
SEPT9-228ENST00000590294 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
SEPT9-228ENST00000590294 P3H3Q8IVL6 736 aa23.36■■□□□ 1.33
SEPT9-228ENST00000590294 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.337e-7■■■■□ 22.2
SEPT9-228ENST00000590294 TNIKQ9UKE5 1360 aa23.33■■□□□ 1.33
SEPT9-228ENST00000590294 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
SEPT9-228ENST00000590294 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
SEPT9-228ENST00000590294 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
SEPT9-228ENST00000590294 PRXQ9BXM0 1461 aa23.26■■□□□ 1.31
SEPT9-228ENST00000590294 FBLN2P98095 1184 aa23.26■■□□□ 1.31
SEPT9-228ENST00000590294 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
SEPT9-228ENST00000590294 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
SEPT9-228ENST00000590294 CLIP1P30622 1438 aa23.21■■□□□ 1.31
SEPT9-228ENST00000590294 KIF21BO75037 1637 aa23.2■■□□□ 1.3
SEPT9-228ENST00000590294 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
SEPT9-228ENST00000590294 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
SEPT9-228ENST00000590294 TARBP1Q13395 1621 aaKnown RBP23.1■■□□□ 1.29
SEPT9-228ENST00000590294 WDR62O43379 1518 aa23.07■■□□□ 1.28
SEPT9-228ENST00000590294 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
SEPT9-228ENST00000590294 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
SEPT9-228ENST00000590294 ERICH3Q5RHP9 1530 aa23.01■■□□□ 1.27
SEPT9-228ENST00000590294 WDR97A6NE52 1622 aa23■■□□□ 1.27
SEPT9-228ENST00000590294 ABCA5Q8WWZ7 1642 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms