RNA–Protein interactions for RNA: ENST00000591704.5

SEPT9-239, Transcript of septin 9, humanhuman

TSL 2

Gene SEPT9, Length 749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-239ENST00000591704 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
SEPT9-239ENST00000591704 CCDC180Q9P1Z9 1646 aa26.09■■□□□ 1.77
SEPT9-239ENST00000591704 ABCC9O60706 1549 aa25.86■■□□□ 1.73
SEPT9-239ENST00000591704 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
SEPT9-239ENST00000591704 NACADO15069 1562 aa24.58■■□□□ 1.52
SEPT9-239ENST00000591704 DCAF8L2P0C7V8 631 aa24.48■■□□□ 1.51
SEPT9-239ENST00000591704 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
SEPT9-239ENST00000591704 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
SEPT9-239ENST00000591704 DNAJC5BQ9UF47 199 aa24.22■■□□□ 1.47
SEPT9-239ENST00000591704 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
SEPT9-239ENST00000591704 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
SEPT9-239ENST00000591704 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
SEPT9-239ENST00000591704 BICRAQ9NZM4 1560 aa24.05■■□□□ 1.44
SEPT9-239ENST00000591704 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
SEPT9-239ENST00000591704 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
SEPT9-239ENST00000591704 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
SEPT9-239ENST00000591704 EIF4G1Q04637 1599 aaKnown RBP23.38■■□□□ 1.33
SEPT9-239ENST00000591704 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
SEPT9-239ENST00000591704 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
SEPT9-239ENST00000591704 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
SEPT9-239ENST00000591704 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
SEPT9-239ENST00000591704 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
SEPT9-239ENST00000591704 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
SEPT9-239ENST00000591704 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
SEPT9-239ENST00000591704 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
SEPT9-239ENST00000591704 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
SEPT9-239ENST00000591704 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
SEPT9-239ENST00000591704 NESP48681 1621 aa22.32■■□□□ 1.16
SEPT9-239ENST00000591704 WIZO95785 1651 aa22.31■■□□□ 1.16
SEPT9-239ENST00000591704 CUX2O14529 1486 aa22.31■■□□□ 1.16
SEPT9-239ENST00000591704 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
SEPT9-239ENST00000591704 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
SEPT9-239ENST00000591704 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
SEPT9-239ENST00000591704 LAMC3Q9Y6N6 1575 aa22.13■■□□□ 1.13
SEPT9-239ENST00000591704 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
SEPT9-239ENST00000591704 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
SEPT9-239ENST00000591704 TOP2AP11388 1531 aaKnown RBP22.02■■□□□ 1.12
SEPT9-239ENST00000591704 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
SEPT9-239ENST00000591704 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
SEPT9-239ENST00000591704 CFTRP13569 1480 aa21.86■■□□□ 1.09
SEPT9-239ENST00000591704 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
SEPT9-239ENST00000591704 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
SEPT9-239ENST00000591704 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
SEPT9-239ENST00000591704 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
SEPT9-239ENST00000591704 WDR62O43379 1518 aa21.76■■□□□ 1.07
SEPT9-239ENST00000591704 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
SEPT9-239ENST00000591704 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
SEPT9-239ENST00000591704 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
SEPT9-239ENST00000591704 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
SEPT9-239ENST00000591704 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
SEPT9-239ENST00000591704 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1
SEPT9-239ENST00000591704 IFT140Q96RY7 1462 aa21.32■■□□□ 1
SEPT9-239ENST00000591704 ABCC8Q09428 1581 aa21.31■■□□□ 1
SEPT9-239ENST00000591704 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
SEPT9-239ENST00000591704 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
SEPT9-239ENST00000591704 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
SEPT9-239ENST00000591704 CUX1P39880 1505 aa21.2■□□□□ 0.98
SEPT9-239ENST00000591704 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
SEPT9-239ENST00000591704 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
SEPT9-239ENST00000591704 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
SEPT9-239ENST00000591704 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.983e-7■■□□□ 14.1
SEPT9-239ENST00000591704 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
SEPT9-239ENST00000591704 SOGA1O94964 1423 aa21.1■□□□□ 0.97
SEPT9-239ENST00000591704 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
SEPT9-239ENST00000591704 WDR97A6NE52 1622 aa21■□□□□ 0.95
SEPT9-239ENST00000591704 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
SEPT9-239ENST00000591704 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
SEPT9-239ENST00000591704 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
SEPT9-239ENST00000591704 CHD1O14646 1710 aa20.98■□□□□ 0.95
SEPT9-239ENST00000591704 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
SEPT9-239ENST00000591704 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
SEPT9-239ENST00000591704 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
SEPT9-239ENST00000591704 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
SEPT9-239ENST00000591704 ABCA10Q8WWZ4 1543 aa20.9■□□□□ 0.94
SEPT9-239ENST00000591704 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
SEPT9-239ENST00000591704 TOP2BQ02880 1626 aa20.89■□□□□ 0.94
SEPT9-239ENST00000591704 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
SEPT9-239ENST00000591704 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
SEPT9-239ENST00000591704 FBLN2P98095 1184 aa20.86■□□□□ 0.93
SEPT9-239ENST00000591704 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
SEPT9-239ENST00000591704 MAGI1Q96QZ7 1491 aaPredicted RBP20.85■□□□□ 0.93
SEPT9-239ENST00000591704 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
SEPT9-239ENST00000591704 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
SEPT9-239ENST00000591704 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
SEPT9-239ENST00000591704 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
SEPT9-239ENST00000591704 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
SEPT9-239ENST00000591704 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
SEPT9-239ENST00000591704 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
SEPT9-239ENST00000591704 GRIN2AQ12879 1464 aa20.63■□□□□ 0.89
SEPT9-239ENST00000591704 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
SEPT9-239ENST00000591704 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
SEPT9-239ENST00000591704 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
SEPT9-239ENST00000591704 NUP160Q12769 1436 aa20.57■□□□□ 0.88
SEPT9-239ENST00000591704 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
SEPT9-239ENST00000591704 IGF1RP08069 1367 aa20.46■□□□□ 0.87
SEPT9-239ENST00000591704 SHROOM2Q13796 1616 aa20.45■□□□□ 0.87
SEPT9-239ENST00000591704 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
SEPT9-239ENST00000591704 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
SEPT9-239ENST00000591704 RUSC2Q8N2Y8 1516 aa20.39■□□□□ 0.85
SEPT9-239ENST00000591704 CUL7Q14999 1698 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms