RNA–Protein interactions for RNA: ENST00000588690.5

SEPT9-220, Transcript of septin 9, humanhuman

TSL 5 BASIC

Gene SEPT9, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-220ENST00000588690 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
SEPT9-220ENST00000588690 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.5
SEPT9-220ENST00000588690 HRCP23327 699 aa24.29■■□□□ 1.48
SEPT9-220ENST00000588690 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
SEPT9-220ENST00000588690 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
SEPT9-220ENST00000588690 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
SEPT9-220ENST00000588690 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
SEPT9-220ENST00000588690 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
SEPT9-220ENST00000588690 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
SEPT9-220ENST00000588690 PCGF6Q9BYE7 350 aa23.72■■□□□ 1.39
SEPT9-220ENST00000588690 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
SEPT9-220ENST00000588690 TRIM26Q12899 539 aaPredicted RBP23.25■■□□□ 1.31
SEPT9-220ENST00000588690 LOC105371045A0A1W2PR82 267 aa23.21■■□□□ 1.31
SEPT9-220ENST00000588690 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
SEPT9-220ENST00000588690 PELP1Q8IZL8 1130 aaKnown RBP23.05■■□□□ 1.28
SEPT9-220ENST00000588690 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
SEPT9-220ENST00000588690 ABCC9O60706 1549 aa23■■□□□ 1.27
SEPT9-220ENST00000588690 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
SEPT9-220ENST00000588690 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
SEPT9-220ENST00000588690 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
SEPT9-220ENST00000588690 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
SEPT9-220ENST00000588690 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
SEPT9-220ENST00000588690 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
SEPT9-220ENST00000588690 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
SEPT9-220ENST00000588690 NEUROD1Q13562 356 aa22.18■■□□□ 1.14
SEPT9-220ENST00000588690 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
SEPT9-220ENST00000588690 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
SEPT9-220ENST00000588690 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
SEPT9-220ENST00000588690 MYT1Q01538 1121 aa22.1■■□□□ 1.13
SEPT9-220ENST00000588690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
SEPT9-220ENST00000588690 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.128e-8■■■■■ 37.6
SEPT9-220ENST00000588690 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
SEPT9-220ENST00000588690 WIZO95785 1651 aa22.05■■□□□ 1.12
SEPT9-220ENST00000588690 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
SEPT9-220ENST00000588690 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
SEPT9-220ENST00000588690 DIEXFQ68CQ4 756 aaKnown RBP22.03■■□□□ 1.12
SEPT9-220ENST00000588690 NACADO15069 1562 aa22.02■■□□□ 1.11
SEPT9-220ENST00000588690 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
SEPT9-220ENST00000588690 GTF3C3Q9Y5Q9 886 aa21.99■■□□□ 1.11
SEPT9-220ENST00000588690 CEP162Q5TB80 1403 aa21.82■■□□□ 1.08
SEPT9-220ENST00000588690 TNIKQ9UKE5 1360 aa21.79■■□□□ 1.08
SEPT9-220ENST00000588690 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
SEPT9-220ENST00000588690 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
SEPT9-220ENST00000588690 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
SEPT9-220ENST00000588690 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
SEPT9-220ENST00000588690 EEA1Q15075 1411 aa21.7■■□□□ 1.07
SEPT9-220ENST00000588690 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
SEPT9-220ENST00000588690 SOGA1O94964 1423 aa21.62■■□□□ 1.05
SEPT9-220ENST00000588690 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
SEPT9-220ENST00000588690 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
SEPT9-220ENST00000588690 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.03
SEPT9-220ENST00000588690 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
SEPT9-220ENST00000588690 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
SEPT9-220ENST00000588690 MIER1Q8N108 512 aa21.49■■□□□ 1.03
SEPT9-220ENST00000588690 KIF21BO75037 1637 aa21.43■■□□□ 1.02
SEPT9-220ENST00000588690 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
SEPT9-220ENST00000588690 UBTFP17480 764 aaKnown RBP21.37■■□□□ 1.01
SEPT9-220ENST00000588690 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
SEPT9-220ENST00000588690 CLSPNQ9HAW4 1339 aa21.32■■□□□ 1
SEPT9-220ENST00000588690 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
SEPT9-220ENST00000588690 BAZ1BQ9UIG0 1483 aaKnown RBP21.29■■□□□ 1
SEPT9-220ENST00000588690 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
SEPT9-220ENST00000588690 CLIP1P30622 1438 aa21.27■■□□□ 1
SEPT9-220ENST00000588690 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
SEPT9-220ENST00000588690 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
SEPT9-220ENST00000588690 PEG3Q9GZU2 1588 aa21.21■□□□□ 0.99
SEPT9-220ENST00000588690 DHX57Q6P158 1386 aaKnown RBP21.11■□□□□ 0.97
SEPT9-220ENST00000588690 SUPT16HQ9Y5B9 1047 aaKnown RBP21.11■□□□□ 0.97
SEPT9-220ENST00000588690 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
SEPT9-220ENST00000588690 APLP2Q06481 763 aa21.01■□□□□ 0.95
SEPT9-220ENST00000588690 CUX2O14529 1486 aa21.01■□□□□ 0.95
SEPT9-220ENST00000588690 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
SEPT9-220ENST00000588690 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
SEPT9-220ENST00000588690 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
SEPT9-220ENST00000588690 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.94
SEPT9-220ENST00000588690 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
SEPT9-220ENST00000588690 TSHZ2Q9NRE2 1034 aa20.94■□□□□ 0.94
SEPT9-220ENST00000588690 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
SEPT9-220ENST00000588690 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
SEPT9-220ENST00000588690 ANP32EQ9BTT0 268 aa20.85■□□□□ 0.93
SEPT9-220ENST00000588690 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
SEPT9-220ENST00000588690 KANK4Q5T7N3 995 aaPredicted RBP20.78■□□□□ 0.92
SEPT9-220ENST00000588690 MAPKBP1O60336 1514 aa20.73■□□□□ 0.91
SEPT9-220ENST00000588690 CCNB3Q8WWL7 1395 aa20.73■□□□□ 0.91
SEPT9-220ENST00000588690 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
SEPT9-220ENST00000588690 MAP3K1Q13233 1512 aa20.65■□□□□ 0.9
SEPT9-220ENST00000588690 ARHGAP35Q9NRY4 1499 aa20.64■□□□□ 0.89
SEPT9-220ENST00000588690 KCNH8Q96L42 1107 aa20.64■□□□□ 0.89
SEPT9-220ENST00000588690 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
SEPT9-220ENST00000588690 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
SEPT9-220ENST00000588690 CUX1P39880 1505 aa20.59■□□□□ 0.89
SEPT9-220ENST00000588690 KIF27Q86VH2 1401 aa20.57■□□□□ 0.88
SEPT9-220ENST00000588690 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
SEPT9-220ENST00000588690 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
SEPT9-220ENST00000588690 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
SEPT9-220ENST00000588690 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
SEPT9-220ENST00000588690 FKBP8Q14318 412 aa20.52■□□□□ 0.88
SEPT9-220ENST00000588690 BCL11AQ9H165 835 aa20.51■□□□□ 0.87
SEPT9-220ENST00000588690 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
SEPT9-220ENST00000588690 CCER2I3L3R5 266 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms