RNA–Protein interactions for RNA: ENST00000469491.5

FNDC3B-207, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 2

Gene FNDC3B, Length 2,916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-207ENST00000469491 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
FNDC3B-207ENST00000469491 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
FNDC3B-207ENST00000469491 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
FNDC3B-207ENST00000469491 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
FNDC3B-207ENST00000469491 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
FNDC3B-207ENST00000469491 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
FNDC3B-207ENST00000469491 ABCC9O60706 1549 aa30.52■■■□□ 2.48
FNDC3B-207ENST00000469491 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
FNDC3B-207ENST00000469491 SCRIBQ14160 1630 aa29.99■■■□□ 2.39
FNDC3B-207ENST00000469491 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.38
FNDC3B-207ENST00000469491 NACADO15069 1562 aa29.84■■■□□ 2.37
FNDC3B-207ENST00000469491 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
FNDC3B-207ENST00000469491 RSF1Q96T23 1441 aaPredicted RBP29.22■■■□□ 2.27
FNDC3B-207ENST00000469491 CECR2Q9BXF3 1484 aa29.2■■■□□ 2.27
FNDC3B-207ENST00000469491 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
FNDC3B-207ENST00000469491 PABPN1Q86U42 306 aaKnown RBP eCLIP29.06■■■□□ 2.24
FNDC3B-207ENST00000469491 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
FNDC3B-207ENST00000469491 MROH2BQ7Z745 1585 aa28.99■■■□□ 2.23
FNDC3B-207ENST00000469491 WIZO95785 1651 aa28.8■■■□□ 2.2
FNDC3B-207ENST00000469491 BICRAQ9NZM4 1560 aa28.78■■■□□ 2.2
FNDC3B-207ENST00000469491 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
FNDC3B-207ENST00000469491 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
FNDC3B-207ENST00000469491 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
FNDC3B-207ENST00000469491 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
FNDC3B-207ENST00000469491 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
FNDC3B-207ENST00000469491 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
FNDC3B-207ENST00000469491 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
FNDC3B-207ENST00000469491 FAM9AQ8IZU1 332 aaPredicted RBP28.11■■■□□ 2.09
FNDC3B-207ENST00000469491 ATAD2BQ9ULI0 1458 aa28.06■■■□□ 2.08
FNDC3B-207ENST00000469491 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.08
FNDC3B-207ENST00000469491 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
FNDC3B-207ENST00000469491 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.06
FNDC3B-207ENST00000469491 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.06
FNDC3B-207ENST00000469491 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
FNDC3B-207ENST00000469491 NCAPD3P42695 1498 aa27.63■■■□□ 2.01
FNDC3B-207ENST00000469491 HMGXB3Q12766 1538 aa27.54■■■□□ 2
FNDC3B-207ENST00000469491 WRNQ14191 1432 aaPredicted RBP eCLIP27.49■■□□□ 1.99
FNDC3B-207ENST00000469491 SOGA1O94964 1423 aa27.46■■□□□ 1.99
FNDC3B-207ENST00000469491 CC2D2AQ9P2K1 1620 aa27.43■■□□□ 1.98
FNDC3B-207ENST00000469491 RUSC2Q8N2Y8 1516 aa27.37■■□□□ 1.97
FNDC3B-207ENST00000469491 SYNJ1O43426 1573 aa27.37■■□□□ 1.97
FNDC3B-207ENST00000469491 PCGF6Q9BYE7 350 aa27.36■■□□□ 1.97
FNDC3B-207ENST00000469491 CSRNP3Q8WYN3 585 aa27.22■■□□□ 1.95
FNDC3B-207ENST00000469491 CFTRP13569 1480 aa27.19■■□□□ 1.94
FNDC3B-207ENST00000469491 UBTFP17480 764 aaKnown RBP27.1■■□□□ 1.93
FNDC3B-207ENST00000469491 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
FNDC3B-207ENST00000469491 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
FNDC3B-207ENST00000469491 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
FNDC3B-207ENST00000469491 EEA1Q15075 1411 aa27.07■■□□□ 1.92
FNDC3B-207ENST00000469491 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
FNDC3B-207ENST00000469491 CUX1P39880 1505 aa27.03■■□□□ 1.92
FNDC3B-207ENST00000469491 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
FNDC3B-207ENST00000469491 TRIM26Q12899 539 aaPredicted RBP26.94■■□□□ 1.9
FNDC3B-207ENST00000469491 NESP48681 1621 aa26.94■■□□□ 1.9
FNDC3B-207ENST00000469491 CEP162Q5TB80 1403 aa26.91■■□□□ 1.9
FNDC3B-207ENST00000469491 GOLGA3Q08378 1498 aa26.89■■□□□ 1.9
FNDC3B-207ENST00000469491 TNIKQ9UKE5 1360 aa26.89■■□□□ 1.9
FNDC3B-207ENST00000469491 PRDM2Q13029 1718 aa26.88■■□□□ 1.89
FNDC3B-207ENST00000469491 RANGAP1P46060 587 aaPredicted RBP26.87■■□□□ 1.89
FNDC3B-207ENST00000469491 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
FNDC3B-207ENST00000469491 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
FNDC3B-207ENST00000469491 RAPGEF2Q9Y4G8 1499 aa26.81■■□□□ 1.88
FNDC3B-207ENST00000469491 TTBK1Q5TCY1 1321 aaPredicted RBP26.81■■□□□ 1.88
FNDC3B-207ENST00000469491 KIF21BO75037 1637 aa26.75■■□□□ 1.87
FNDC3B-207ENST00000469491 KIF27Q86VH2 1401 aa26.7■■□□□ 1.87
FNDC3B-207ENST00000469491 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
FNDC3B-207ENST00000469491 HRCP23327 699 aa26.67■■□□□ 1.86
FNDC3B-207ENST00000469491 CUX2O14529 1486 aa26.65■■□□□ 1.86
FNDC3B-207ENST00000469491 CLIP1P30622 1438 aa26.6■■□□□ 1.85
FNDC3B-207ENST00000469491 PRXQ9BXM0 1461 aa26.59■■□□□ 1.85
FNDC3B-207ENST00000469491 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
FNDC3B-207ENST00000469491 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
FNDC3B-207ENST00000469491 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
FNDC3B-207ENST00000469491 DNMBPQ6XZF7 1577 aa26.51■■□□□ 1.83
FNDC3B-207ENST00000469491 IGF1RP08069 1367 aa26.5■■□□□ 1.83
FNDC3B-207ENST00000469491 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
FNDC3B-207ENST00000469491 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
FNDC3B-207ENST00000469491 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
FNDC3B-207ENST00000469491 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
FNDC3B-207ENST00000469491 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
FNDC3B-207ENST00000469491 CARMIL1Q5VZK9 1371 aa26.39■■□□□ 1.81
FNDC3B-207ENST00000469491 VPS8Q8N3P4 1428 aa26.33■■□□□ 1.81
FNDC3B-207ENST00000469491 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.8
FNDC3B-207ENST00000469491 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
FNDC3B-207ENST00000469491 APLP2Q06481 763 aa26.28■■□□□ 1.8
FNDC3B-207ENST00000469491 ARAP1Q96P48 1450 aa26.24■■□□□ 1.79
FNDC3B-207ENST00000469491 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
FNDC3B-207ENST00000469491 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
FNDC3B-207ENST00000469491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.15■■□□□ 1.78
FNDC3B-207ENST00000469491 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
FNDC3B-207ENST00000469491 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
FNDC3B-207ENST00000469491 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
FNDC3B-207ENST00000469491 KANK4Q5T7N3 995 aaPredicted RBP26.08■■□□□ 1.76
FNDC3B-207ENST00000469491 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
FNDC3B-207ENST00000469491 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
FNDC3B-207ENST00000469491 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.762e-7■■■■■ 28.1
FNDC3B-207ENST00000469491 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
FNDC3B-207ENST00000469491 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
FNDC3B-207ENST00000469491 CUL7Q14999 1698 aa26.01■■□□□ 1.75
FNDC3B-207ENST00000469491 CCER1Q8TC90 406 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1229.7 ms