RNA–Protein interactions for RNA: ENST00000327726.10

CFD-201, Transcript of complement factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CFD, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-201ENST00000327726 NISCHQ9Y2I1 1504 aa51.6■■■■■ 5.85
CFD-201ENST00000327726 CCDC180Q9P1Z9 1646 aa46.19■■■■■ 4.98
CFD-201ENST00000327726 ABCC9O60706 1549 aa45.86■■■■■ 4.93
CFD-201ENST00000327726 RB1CC1Q8TDY2 1594 aa43.85■■■■■ 4.61
CFD-201ENST00000327726 NACADO15069 1562 aa43.63■■■■■ 4.57
CFD-201ENST00000327726 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
CFD-201ENST00000327726 MYO15BQ96JP2 1530 aa43.14■■■■■ 4.5
CFD-201ENST00000327726 ZCCHC6Q5VYS8 1495 aaKnown RBP42.82■■■■■ 4.45
CFD-201ENST00000327726 UNC13AQ9UPW8 1703 aa42.75■■■■■ 4.43
CFD-201ENST00000327726 PABPN1Q86U42 306 aaKnown RBP eCLIP42.74■■■■■ 4.43
CFD-201ENST00000327726 DNAJC5BQ9UF47 199 aa42.7■■■■■ 4.43
CFD-201ENST00000327726 DCAF1Q9Y4B6 1507 aa42.69■■■■■ 4.42
CFD-201ENST00000327726 BICRAQ9NZM4 1560 aa42.48■■■■■ 4.39
CFD-201ENST00000327726 SHROOM4Q9ULL8 1493 aa42.07■■■■■ 4.33
CFD-201ENST00000327726 SCRIBQ14160 1630 aa42.06■■■■■ 4.32
CFD-201ENST00000327726 EIF4G1Q04637 1599 aaKnown RBP41.45■■■■■ 4.23
CFD-201ENST00000327726 CC2D2AQ9P2K1 1620 aa41.44■■■■■ 4.22
CFD-201ENST00000327726 CECR2Q9BXF3 1484 aa41.32■■■■■ 4.2
CFD-201ENST00000327726 NCAPD3P42695 1498 aa40.26■■■■■ 4.03
CFD-201ENST00000327726 SMARCA4P51532 1647 aa40.18■■■■■ 4.02
CFD-201ENST00000327726 ATAD2BQ9ULI0 1458 aa40.15■■■■■ 4.02
CFD-201ENST00000327726 SMARCA2P51531 1590 aa40.1■■■■■ 4.01
CFD-201ENST00000327726 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4.01
CFD-201ENST00000327726 HMGXB3Q12766 1538 aa39.99■■■■□ 3.99
CFD-201ENST00000327726 BAZ1BQ9UIG0 1483 aaKnown RBP39.81■■■■□ 3.96
CFD-201ENST00000327726 PEG3Q9GZU2 1588 aa39.8■■■■□ 3.96
CFD-201ENST00000327726 MROH2BQ7Z745 1585 aa39.73■■■■□ 3.95
CFD-201ENST00000327726 ERCC6Q03468 1493 aa39.64■■■■□ 3.94
CFD-201ENST00000327726 CUX2O14529 1486 aa39.48■■■■□ 3.91
CFD-201ENST00000327726 NESP48681 1621 aa39.46■■■■□ 3.91
CFD-201ENST00000327726 LAMC3Q9Y6N6 1575 aa39.32■■■■□ 3.88
CFD-201ENST00000327726 WIZO95785 1651 aa39.26■■■■□ 3.88
CFD-201ENST00000327726 PDS5BQ9NTI5 1447 aa39.11■■■■□ 3.85
CFD-201ENST00000327726 DNAJC5Q9H3Z4 198 aa39.08■■■■□ 3.85
CFD-201ENST00000327726 CADPSQ9ULU8 1353 aa39.06■■■■□ 3.84
CFD-201ENST00000327726 RSF1Q96T23 1441 aaPredicted RBP39.05■■■■□ 3.84
CFD-201ENST00000327726 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
CFD-201ENST00000327726 KIF21AQ7Z4S6 1674 aa38.97■■■■□ 3.83
CFD-201ENST00000327726 TOP2AP11388 1531 aaKnown RBP38.84■■■■□ 3.81
CFD-201ENST00000327726 MRC2Q9UBG0 1479 aa38.71■■■■□ 3.79
CFD-201ENST00000327726 CFTRP13569 1480 aa38.66■■■■□ 3.78
CFD-201ENST00000327726 CEP164Q9UPV0 1460 aa38.63■■■■□ 3.77
CFD-201ENST00000327726 FANCD2Q9BXW9 1451 aa38.6■■■■□ 3.77
CFD-201ENST00000327726 WDR62O43379 1518 aa38.58■■■■□ 3.77
CFD-201ENST00000327726 CCDC88BA6NC98 1476 aa38.37■■■■□ 3.73
CFD-201ENST00000327726 PRDM2Q13029 1718 aa38.28■■■■□ 3.72
CFD-201ENST00000327726 URB2Q14146 1524 aaKnown RBP38.22■■■■□ 3.71
CFD-201ENST00000327726 ABCC8Q09428 1581 aa37.9■■■■□ 3.66
CFD-201ENST00000327726 TOPBP1Q92547 1522 aa37.88■■■■□ 3.65
CFD-201ENST00000327726 IFT140Q96RY7 1462 aa37.85■■■■□ 3.65
CFD-201ENST00000327726 DNMBPQ6XZF7 1577 aa37.79■■■■□ 3.64
CFD-201ENST00000327726 OSCARQ8IYS5 282 aa37.74■■■■□ 3.63
CFD-201ENST00000327726 ZNF608Q9ULD9 1512 aaPredicted RBP37.69■■■■□ 3.62
CFD-201ENST00000327726 SUPT5HO00267 1087 aaKnown RBP37.56■■■■□ 3.6
CFD-201ENST00000327726 POLA1P09884 1462 aaPredicted RBP37.52■■■■□ 3.6
CFD-201ENST00000327726 EIF4G3O43432 1585 aaKnown RBP37.51■■■■□ 3.6
CFD-201ENST00000327726 TARBP1Q13395 1621 aaKnown RBP37.5■■■■□ 3.59
CFD-201ENST00000327726 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
CFD-201ENST00000327726 AQRO60306 1485 aaKnown RBP eCLIP37.41■■■■□ 3.58
CFD-201ENST00000327726 SOGA1O94964 1423 aa37.38■■■■□ 3.57
CFD-201ENST00000327726 RAD54L2Q9Y4B4 1467 aa37.35■■■■□ 3.57
CFD-201ENST00000327726 FGD5Q6ZNL6 1462 aa37.33■■■■□ 3.57
CFD-201ENST00000327726 CUX1P39880 1505 aa37.32■■■■□ 3.57
CFD-201ENST00000327726 TDRD9Q8NDG6 1382 aaKnown RBP37.24■■■■□ 3.55
CFD-201ENST00000327726 WDR97A6NE52 1622 aa37.23■■■■□ 3.55
CFD-201ENST00000327726 CHD1O14646 1710 aa37.16■■■■□ 3.54
CFD-201ENST00000327726 FBLN2P98095 1184 aa37.16■■■■□ 3.54
CFD-201ENST00000327726 RIMBP3CA6NJZ7 1639 aa37.14■■■■□ 3.54
CFD-201ENST00000327726 RIMBP3BA6NNM3 1639 aa37.14■■■■□ 3.54
CFD-201ENST00000327726 RIMBP3Q9UFD9 1639 aa37.14■■■■□ 3.54
CFD-201ENST00000327726 ARHGEF11O15085 1522 aa37.07■■■■□ 3.53
CFD-201ENST00000327726 SNAPC4Q5SXM2 1469 aa37.05■■■■□ 3.52
CFD-201ENST00000327726 GRIN2BQ13224 1484 aa37.03■■■■□ 3.52
CFD-201ENST00000327726 MAGI1Q96QZ7 1491 aaPredicted RBP37.01■■■■□ 3.52
CFD-201ENST00000327726 CHMP7Q8WUX9 453 aaPredicted RBP36.96■■■■□ 3.51
CFD-201ENST00000327726 ABCA10Q8WWZ4 1543 aa36.94■■■■□ 3.5
CFD-201ENST00000327726 GAPVD1Q14C86 1478 aa36.93■■■■□ 3.5
CFD-201ENST00000327726 WRNQ14191 1432 aaPredicted RBP eCLIP36.89■■■■□ 3.51e-7■■■■□ 20.9
CFD-201ENST00000327726 SYNJ2O15056 1496 aa36.88■■■■□ 3.49
CFD-201ENST00000327726 PBRM1Q86U86 1689 aa36.85■■■■□ 3.49
CFD-201ENST00000327726 TOP2BQ02880 1626 aa36.84■■■■□ 3.49
CFD-201ENST00000327726 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
CFD-201ENST00000327726 ABCA5Q8WWZ7 1642 aa36.82■■■■□ 3.49
CFD-201ENST00000327726 BIVM-ERCC5R4GMW8 1640 aa36.82■■■■□ 3.49
CFD-201ENST00000327726 CYB5RLQ6IPT4 315 aa36.79■■■■□ 3.48
CFD-201ENST00000327726 CLASP1Q7Z460 1538 aa36.77■■■■□ 3.48
CFD-201ENST00000327726 ARAP1Q96P48 1450 aa36.7■■■■□ 3.47
CFD-201ENST00000327726 ADAMTS12P58397 1594 aa36.53■■■■□ 3.44
CFD-201ENST00000327726 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
CFD-201ENST00000327726 ERICH3Q5RHP9 1530 aa36.5■■■■□ 3.43
CFD-201ENST00000327726 FHAD1B1AJZ9 1412 aa36.49■■■■□ 3.43
CFD-201ENST00000327726 NUP160Q12769 1436 aa36.4■■■■□ 3.42
CFD-201ENST00000327726 CEP170Q5SW79 1584 aa36.36■■■■□ 3.41
CFD-201ENST00000327726 TRHP20396 242 aaPredicted RBP36.33■■■■□ 3.41
CFD-201ENST00000327726 SHROOM2Q13796 1616 aa36.19■■■■□ 3.38
CFD-201ENST00000327726 KIF27Q86VH2 1401 aa36.17■■■■□ 3.38
CFD-201ENST00000327726 ERCC6L2Q5T890 1561 aa36.16■■■■□ 3.38
CFD-201ENST00000327726 IGF1RP08069 1367 aa36.08■■■■□ 3.37
CFD-201ENST00000327726 JPH4Q96JJ6 628 aa36.05■■■■□ 3.36
CFD-201ENST00000327726 PRG4Q92954 1404 aaPredicted RBP36.04■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms