RNA–Protein interactions for RNA: ENST00000311604.7

LSP1-201, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LSP1, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-201ENST00000311604 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
LSP1-201ENST00000311604 CCDC180Q9P1Z9 1646 aa34.9■■■■□ 3.18
LSP1-201ENST00000311604 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
LSP1-201ENST00000311604 ABCC9O60706 1549 aa33.51■■■□□ 2.95
LSP1-201ENST00000311604 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
LSP1-201ENST00000311604 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
LSP1-201ENST00000311604 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
LSP1-201ENST00000311604 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
LSP1-201ENST00000311604 NACADO15069 1562 aa32.47■■■□□ 2.79
LSP1-201ENST00000311604 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
LSP1-201ENST00000311604 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
LSP1-201ENST00000311604 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
LSP1-201ENST00000311604 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.64
LSP1-201ENST00000311604 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
LSP1-201ENST00000311604 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
LSP1-201ENST00000311604 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
LSP1-201ENST00000311604 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.56
LSP1-201ENST00000311604 MROH2BQ7Z745 1585 aa30.97■■■□□ 2.55
LSP1-201ENST00000311604 BAZ1AQ9NRL2 1556 aaPredicted RBP30.85■■■□□ 2.53
LSP1-201ENST00000311604 SMARCA4P51532 1647 aa30.79■■■□□ 2.52
LSP1-201ENST00000311604 WIZO95785 1651 aa30.72■■■□□ 2.51
LSP1-201ENST00000311604 EIF4G1Q04637 1599 aaKnown RBP30.53■■■□□ 2.48
LSP1-201ENST00000311604 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
LSP1-201ENST00000311604 TOP2AP11388 1531 aaKnown RBP30.36■■■□□ 2.45
LSP1-201ENST00000311604 DNAJC5BQ9UF47 199 aa30.27■■■□□ 2.44
LSP1-201ENST00000311604 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
LSP1-201ENST00000311604 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.43
LSP1-201ENST00000311604 SMARCA2P51531 1590 aa30.18■■■□□ 2.42
LSP1-201ENST00000311604 CHIC1Q5VXU3 224 aa30.07■■■□□ 2.41
LSP1-201ENST00000311604 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
LSP1-201ENST00000311604 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
LSP1-201ENST00000311604 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
LSP1-201ENST00000311604 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
LSP1-201ENST00000311604 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
LSP1-201ENST00000311604 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
LSP1-201ENST00000311604 CFTRP13569 1480 aa29.33■■■□□ 2.29
LSP1-201ENST00000311604 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
LSP1-201ENST00000311604 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
LSP1-201ENST00000311604 NESP48681 1621 aa29.21■■■□□ 2.27
LSP1-201ENST00000311604 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
LSP1-201ENST00000311604 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
LSP1-201ENST00000311604 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
LSP1-201ENST00000311604 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
LSP1-201ENST00000311604 TOP2BQ02880 1626 aa29■■■□□ 2.23
LSP1-201ENST00000311604 CUX1P39880 1505 aa28.96■■■□□ 2.23
LSP1-201ENST00000311604 LOC105371045A0A1W2PR82 267 aa28.92■■■□□ 2.22
LSP1-201ENST00000311604 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
LSP1-201ENST00000311604 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.22
LSP1-201ENST00000311604 SOGA1O94964 1423 aa28.88■■■□□ 2.21
LSP1-201ENST00000311604 FANCD2Q9BXW9 1451 aa28.88■■■□□ 2.21
LSP1-201ENST00000311604 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
LSP1-201ENST00000311604 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
LSP1-201ENST00000311604 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
LSP1-201ENST00000311604 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
LSP1-201ENST00000311604 EEA1Q15075 1411 aa28.71■■■□□ 2.19
LSP1-201ENST00000311604 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.17
LSP1-201ENST00000311604 TOPBP1Q92547 1522 aa28.59■■■□□ 2.17
LSP1-201ENST00000311604 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
LSP1-201ENST00000311604 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
LSP1-201ENST00000311604 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
LSP1-201ENST00000311604 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
LSP1-201ENST00000311604 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
LSP1-201ENST00000311604 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
LSP1-201ENST00000311604 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
LSP1-201ENST00000311604 KIF21BO75037 1637 aa28.45■■■□□ 2.14
LSP1-201ENST00000311604 WDR62O43379 1518 aa28.41■■■□□ 2.14
LSP1-201ENST00000311604 KIF27Q86VH2 1401 aa28.39■■■□□ 2.14
LSP1-201ENST00000311604 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
LSP1-201ENST00000311604 CUX2O14529 1486 aa28.36■■■□□ 2.13
LSP1-201ENST00000311604 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
LSP1-201ENST00000311604 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
LSP1-201ENST00000311604 ABCA10Q8WWZ4 1543 aa28.34■■■□□ 2.13
LSP1-201ENST00000311604 PRXQ9BXM0 1461 aa28.32■■■□□ 2.12
LSP1-201ENST00000311604 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
LSP1-201ENST00000311604 TNIKQ9UKE5 1360 aa28.28■■■□□ 2.12
LSP1-201ENST00000311604 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
LSP1-201ENST00000311604 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
LSP1-201ENST00000311604 IGF1RP08069 1367 aa28.22■■■□□ 2.11
LSP1-201ENST00000311604 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
LSP1-201ENST00000311604 CEP162Q5TB80 1403 aa28.15■■■□□ 2.1
LSP1-201ENST00000311604 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
LSP1-201ENST00000311604 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
LSP1-201ENST00000311604 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
LSP1-201ENST00000311604 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
LSP1-201ENST00000311604 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
LSP1-201ENST00000311604 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
LSP1-201ENST00000311604 CUL7Q14999 1698 aa27.98■■■□□ 2.07
LSP1-201ENST00000311604 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.07
LSP1-201ENST00000311604 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
LSP1-201ENST00000311604 CLIP1P30622 1438 aa27.9■■■□□ 2.06
LSP1-201ENST00000311604 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
LSP1-201ENST00000311604 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
LSP1-201ENST00000311604 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
LSP1-201ENST00000311604 ARAP1Q96P48 1450 aa27.73■■■□□ 2.03
LSP1-201ENST00000311604 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
LSP1-201ENST00000311604 ARHGAP35Q9NRY4 1499 aa27.7■■■□□ 2.03
LSP1-201ENST00000311604 FHAD1B1AJZ9 1412 aa27.69■■■□□ 2.02
LSP1-201ENST00000311604 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
LSP1-201ENST00000311604 RANGAP1P46060 587 aaPredicted RBP27.67■■■□□ 2.02
LSP1-201ENST00000311604 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms