RNA–Protein interactions for RNA: ENST00000421485.5

LSP1-207, Transcript of lymphocyte specific protein 1, humanhuman

TSL 5

Gene LSP1, Length 682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-207ENST00000421485 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
LSP1-207ENST00000421485 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
LSP1-207ENST00000421485 ABCC9O60706 1549 aa32.81■■■□□ 2.84
LSP1-207ENST00000421485 RB1CC1Q8TDY2 1594 aa31.45■■■□□ 2.63
LSP1-207ENST00000421485 NACADO15069 1562 aa31.34■■■□□ 2.61
LSP1-207ENST00000421485 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
LSP1-207ENST00000421485 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
LSP1-207ENST00000421485 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
LSP1-207ENST00000421485 DCAF1Q9Y4B6 1507 aa30.77■■■□□ 2.52
LSP1-207ENST00000421485 UNC13AQ9UPW8 1703 aa30.69■■■□□ 2.5
LSP1-207ENST00000421485 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
LSP1-207ENST00000421485 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.46
LSP1-207ENST00000421485 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
LSP1-207ENST00000421485 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
LSP1-207ENST00000421485 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
LSP1-207ENST00000421485 EIF4G1Q04637 1599 aaKnown RBP29.7■■■□□ 2.35
LSP1-207ENST00000421485 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
LSP1-207ENST00000421485 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
LSP1-207ENST00000421485 NCAPD3P42695 1498 aa28.92■■■□□ 2.22
LSP1-207ENST00000421485 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
LSP1-207ENST00000421485 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
LSP1-207ENST00000421485 BAZ1AQ9NRL2 1556 aaPredicted RBP28.85■■■□□ 2.21
LSP1-207ENST00000421485 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
LSP1-207ENST00000421485 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
LSP1-207ENST00000421485 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
LSP1-207ENST00000421485 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
LSP1-207ENST00000421485 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
LSP1-207ENST00000421485 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
LSP1-207ENST00000421485 WIZO95785 1651 aa28.29■■■□□ 2.12
LSP1-207ENST00000421485 NESP48681 1621 aa28.27■■■□□ 2.12
LSP1-207ENST00000421485 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.11
LSP1-207ENST00000421485 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
LSP1-207ENST00000421485 CUX2O14529 1486 aa28.19■■■□□ 2.1
LSP1-207ENST00000421485 CADPSQ9ULU8 1353 aa28.07■■■□□ 2.08
LSP1-207ENST00000421485 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
LSP1-207ENST00000421485 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
LSP1-207ENST00000421485 KIF21AQ7Z4S6 1674 aa27.93■■■□□ 2.06
LSP1-207ENST00000421485 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
LSP1-207ENST00000421485 CFTRP13569 1480 aa27.81■■■□□ 2.04
LSP1-207ENST00000421485 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
LSP1-207ENST00000421485 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
LSP1-207ENST00000421485 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
LSP1-207ENST00000421485 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
LSP1-207ENST00000421485 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
LSP1-207ENST00000421485 WDR62O43379 1518 aa27.65■■■□□ 2.02
LSP1-207ENST00000421485 PRDM2Q13029 1718 aa27.56■■■□□ 2
LSP1-207ENST00000421485 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
LSP1-207ENST00000421485 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
LSP1-207ENST00000421485 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
LSP1-207ENST00000421485 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
LSP1-207ENST00000421485 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
LSP1-207ENST00000421485 DNMBPQ6XZF7 1577 aa27.17■■□□□ 1.94
LSP1-207ENST00000421485 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
LSP1-207ENST00000421485 OSCARQ8IYS5 282 aa27.02■■□□□ 1.92
LSP1-207ENST00000421485 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
LSP1-207ENST00000421485 TARBP1Q13395 1621 aaKnown RBP26.94■■□□□ 1.9
LSP1-207ENST00000421485 SOGA1O94964 1423 aa26.9■■□□□ 1.9
LSP1-207ENST00000421485 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
LSP1-207ENST00000421485 CUX1P39880 1505 aa26.86■■□□□ 1.89
LSP1-207ENST00000421485 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.89
LSP1-207ENST00000421485 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
LSP1-207ENST00000421485 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
LSP1-207ENST00000421485 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
LSP1-207ENST00000421485 TDRD9Q8NDG6 1382 aaKnown RBP26.76■■□□□ 1.87
LSP1-207ENST00000421485 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
LSP1-207ENST00000421485 FBLN2P98095 1184 aa26.66■■□□□ 1.86
LSP1-207ENST00000421485 CHD1O14646 1710 aa26.65■■□□□ 1.86
LSP1-207ENST00000421485 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
LSP1-207ENST00000421485 WRNQ14191 1432 aaPredicted RBP eCLIP26.61■■□□□ 1.85
LSP1-207ENST00000421485 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
LSP1-207ENST00000421485 MAGI1Q96QZ7 1491 aaPredicted RBP26.59■■□□□ 1.85
LSP1-207ENST00000421485 SNAPC4Q5SXM2 1469 aa26.58■■□□□ 1.85
LSP1-207ENST00000421485 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
LSP1-207ENST00000421485 GAPVD1Q14C86 1478 aa26.56■■□□□ 1.84
LSP1-207ENST00000421485 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
LSP1-207ENST00000421485 BIVM-ERCC5R4GMW8 1640 aa26.55■■□□□ 1.84
LSP1-207ENST00000421485 RIMBP3CA6NJZ7 1639 aa26.52■■□□□ 1.84
LSP1-207ENST00000421485 RIMBP3BA6NNM3 1639 aa26.52■■□□□ 1.84
LSP1-207ENST00000421485 RIMBP3Q9UFD9 1639 aa26.52■■□□□ 1.84
LSP1-207ENST00000421485 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
LSP1-207ENST00000421485 PBRM1Q86U86 1689 aa26.49■■□□□ 1.83
LSP1-207ENST00000421485 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
LSP1-207ENST00000421485 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
LSP1-207ENST00000421485 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
LSP1-207ENST00000421485 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
LSP1-207ENST00000421485 CYB5RLQ6IPT4 315 aa26.33■■□□□ 1.81
LSP1-207ENST00000421485 ERICH3Q5RHP9 1530 aa26.28■■□□□ 1.8
LSP1-207ENST00000421485 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
LSP1-207ENST00000421485 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
LSP1-207ENST00000421485 GRIN2AQ12879 1464 aa26.24■■□□□ 1.79
LSP1-207ENST00000421485 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
LSP1-207ENST00000421485 NUP160Q12769 1436 aa26.14■■□□□ 1.78
LSP1-207ENST00000421485 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
LSP1-207ENST00000421485 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
LSP1-207ENST00000421485 IGF1RP08069 1367 aa26.03■■□□□ 1.76
LSP1-207ENST00000421485 SHROOM2Q13796 1616 aa25.97■■□□□ 1.75
LSP1-207ENST00000421485 CUL7Q14999 1698 aa25.96■■□□□ 1.75
LSP1-207ENST00000421485 JPH4Q96JJ6 628 aa25.94■■□□□ 1.74
LSP1-207ENST00000421485 TRHP20396 242 aaPredicted RBP25.93■■□□□ 1.74
LSP1-207ENST00000421485 ERCC6L2Q5T890 1561 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms