RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 AEBP2Q6ZN18 517 aaPredicted RBP29.56■■■□□ 2.32
FNDC3B-208ENST00000476794 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
FNDC3B-208ENST00000476794 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
FNDC3B-208ENST00000476794 PHF23Q9BUL5 403 aaPredicted RBP24.85■■□□□ 1.57
FNDC3B-208ENST00000476794 FOXD1Q16676 465 aa23.47■■□□□ 1.35
FNDC3B-208ENST00000476794 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
FNDC3B-208ENST00000476794 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
FNDC3B-208ENST00000476794 MSH5O43196 834 aa21.93■■□□□ 1.1
FNDC3B-208ENST00000476794 ADRA2BP18089 450 aa21.84■■□□□ 1.09
FNDC3B-208ENST00000476794 PIAS4Q8N2W9 510 aaPredicted RBP21.83■■□□□ 1.09
FNDC3B-208ENST00000476794 POTEDQ86YR6 584 aa21.42■■□□□ 1.02
FNDC3B-208ENST00000476794 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
FNDC3B-208ENST00000476794 DMRT2Q9Y5R5 561 aa19.98■□□□□ 0.79
FNDC3B-208ENST00000476794 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
FNDC3B-208ENST00000476794 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
FNDC3B-208ENST00000476794 HOXD11P31277 338 aaPredicted RBP19.3■□□□□ 0.68
FNDC3B-208ENST00000476794 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
FNDC3B-208ENST00000476794 RNF216Q9NWF9 866 aaPredicted RBP19.11■□□□□ 0.65
FNDC3B-208ENST00000476794 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
FNDC3B-208ENST00000476794 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
FNDC3B-208ENST00000476794 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
FNDC3B-208ENST00000476794 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
FNDC3B-208ENST00000476794 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
FNDC3B-208ENST00000476794 KCNA4P22459 653 aa18.61■□□□□ 0.57
FNDC3B-208ENST00000476794 NPM3O75607 178 aaKnown RBP18.59■□□□□ 0.57
FNDC3B-208ENST00000476794 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
FNDC3B-208ENST00000476794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
FNDC3B-208ENST00000476794 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
FNDC3B-208ENST00000476794 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
FNDC3B-208ENST00000476794 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
FNDC3B-208ENST00000476794 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
FNDC3B-208ENST00000476794 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
FNDC3B-208ENST00000476794 DSG3P32926 999 aa17.56■□□□□ 0.4
FNDC3B-208ENST00000476794 CAPN15O75808 1086 aa17.51■□□□□ 0.39
FNDC3B-208ENST00000476794 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
FNDC3B-208ENST00000476794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
FNDC3B-208ENST00000476794 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
FNDC3B-208ENST00000476794 APLP2Q06481 763 aa17.34■□□□□ 0.37
FNDC3B-208ENST00000476794 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
FNDC3B-208ENST00000476794 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
FNDC3B-208ENST00000476794 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
FNDC3B-208ENST00000476794 MYCNP04198 464 aaPredicted RBP17.16■□□□□ 0.34
FNDC3B-208ENST00000476794 ZBTB22O15209 634 aa17.14■□□□□ 0.33
FNDC3B-208ENST00000476794 ABCB7O75027 752 aa17.11■□□□□ 0.33
FNDC3B-208ENST00000476794 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
FNDC3B-208ENST00000476794 POLA2Q14181 598 aa16.85■□□□□ 0.29
FNDC3B-208ENST00000476794 ATF5Q9Y2D1 282 aaPredicted RBP16.81■□□□□ 0.28
FNDC3B-208ENST00000476794 POTEHQ6S545 545 aa16.76■□□□□ 0.27
FNDC3B-208ENST00000476794 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
FNDC3B-208ENST00000476794 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
FNDC3B-208ENST00000476794 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
FNDC3B-208ENST00000476794 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
FNDC3B-208ENST00000476794 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
FNDC3B-208ENST00000476794 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
FNDC3B-208ENST00000476794 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
FNDC3B-208ENST00000476794 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
FNDC3B-208ENST00000476794 FBLN2P98095 1184 aa16.05■□□□□ 0.16
FNDC3B-208ENST00000476794 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
FNDC3B-208ENST00000476794 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
FNDC3B-208ENST00000476794 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
FNDC3B-208ENST00000476794 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
FNDC3B-208ENST00000476794 PIP4P2Q8N4L2 257 aa15.97■□□□□ 0.15
FNDC3B-208ENST00000476794 FXR2P51116 673 aaKnown RBP eCLIP15.93■□□□□ 0.14
FNDC3B-208ENST00000476794 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
FNDC3B-208ENST00000476794 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
FNDC3B-208ENST00000476794 FKBP8Q14318 412 aa15.77■□□□□ 0.12
FNDC3B-208ENST00000476794 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
FNDC3B-208ENST00000476794 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
FNDC3B-208ENST00000476794 HAX1O00165 279 aa15.59■□□□□ 0.09
FNDC3B-208ENST00000476794 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
FNDC3B-208ENST00000476794 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
FNDC3B-208ENST00000476794 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
FNDC3B-208ENST00000476794 EVX2Q03828 476 aa15.52■□□□□ 0.08
FNDC3B-208ENST00000476794 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
FNDC3B-208ENST00000476794 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
FNDC3B-208ENST00000476794 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
FNDC3B-208ENST00000476794 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
FNDC3B-208ENST00000476794 AMER1Q5JTC6 1135 aaPredicted RBP15.27■□□□□ 0.04
FNDC3B-208ENST00000476794 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
FNDC3B-208ENST00000476794 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
FNDC3B-208ENST00000476794 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
FNDC3B-208ENST00000476794 GABBR2O75899 941 aa15.14■□□□□ 0.01
FNDC3B-208ENST00000476794 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
FNDC3B-208ENST00000476794 CD44P16070 742 aaKnown RBP15.03■□□□□ -0
FNDC3B-208ENST00000476794 PROM2Q8N271 834 aa15.02■□□□□ -0
FNDC3B-208ENST00000476794 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
FNDC3B-208ENST00000476794 CLCN6P51797 869 aa14.96□□□□□ -0.01
FNDC3B-208ENST00000476794 MNX1P50219 401 aaPredicted RBP14.91□□□□□ -0.02
FNDC3B-208ENST00000476794 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
FNDC3B-208ENST00000476794 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
FNDC3B-208ENST00000476794 VASPP50552 380 aaPredicted RBP14.82□□□□□ -0.04
FNDC3B-208ENST00000476794 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
FNDC3B-208ENST00000476794 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
FNDC3B-208ENST00000476794 LHX8Q68G74 356 aa14.73□□□□□ -0.05
FNDC3B-208ENST00000476794 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
FNDC3B-208ENST00000476794 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
FNDC3B-208ENST00000476794 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
FNDC3B-208ENST00000476794 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
FNDC3B-208ENST00000476794 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
FNDC3B-208ENST00000476794 PHF12Q96QT6 1004 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms