RNA–Protein interactions for RNA: ENST00000541152.6

SEPT9-208, Transcript of septin 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEPT9, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-208ENST00000541152 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
SEPT9-208ENST00000541152 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
SEPT9-208ENST00000541152 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
SEPT9-208ENST00000541152 CCDC180Q9P1Z9 1646 aa25.51■■□□□ 1.67
SEPT9-208ENST00000541152 HRCP23327 699 aa25.28■■□□□ 1.64
SEPT9-208ENST00000541152 PCGF6Q9BYE7 350 aa25.18■■□□□ 1.62
SEPT9-208ENST00000541152 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
SEPT9-208ENST00000541152 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
SEPT9-208ENST00000541152 PPARGC1BQ86YN6 1023 aaKnown RBP25.04■■□□□ 1.6
SEPT9-208ENST00000541152 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
SEPT9-208ENST00000541152 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
SEPT9-208ENST00000541152 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
SEPT9-208ENST00000541152 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
SEPT9-208ENST00000541152 ABCC9O60706 1549 aa24.3■■□□□ 1.48
SEPT9-208ENST00000541152 TRIM26Q12899 539 aaPredicted RBP24.24■■□□□ 1.47
SEPT9-208ENST00000541152 EHMT2Q96KQ7 1210 aa24.05■■□□□ 1.44
SEPT9-208ENST00000541152 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
SEPT9-208ENST00000541152 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
SEPT9-208ENST00000541152 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
SEPT9-208ENST00000541152 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
SEPT9-208ENST00000541152 ZEB1P37275 1124 aaPredicted RBP23.8■■□□□ 1.4
SEPT9-208ENST00000541152 NACADO15069 1562 aa23.75■■□□□ 1.39
SEPT9-208ENST00000541152 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
SEPT9-208ENST00000541152 RB1CC1Q8TDY2 1594 aa23.53■■□□□ 1.36
SEPT9-208ENST00000541152 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
SEPT9-208ENST00000541152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.47■■□□□ 1.35
SEPT9-208ENST00000541152 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
SEPT9-208ENST00000541152 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
SEPT9-208ENST00000541152 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
SEPT9-208ENST00000541152 CECR2Q9BXF3 1484 aa23.28■■□□□ 1.32
SEPT9-208ENST00000541152 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
SEPT9-208ENST00000541152 GTF3C3Q9Y5Q9 886 aa23.19■■□□□ 1.3
SEPT9-208ENST00000541152 UNC13AQ9UPW8 1703 aa23.18■■□□□ 1.3
SEPT9-208ENST00000541152 DIEXFQ68CQ4 756 aaKnown RBP23.15■■□□□ 1.3
SEPT9-208ENST00000541152 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
SEPT9-208ENST00000541152 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
SEPT9-208ENST00000541152 CENPBP07199 599 aaPredicted RBP23.02■■□□□ 1.28
SEPT9-208ENST00000541152 WIZO95785 1651 aa22.97■■□□□ 1.27
SEPT9-208ENST00000541152 YTHDC1Q96MU7 727 aaKnown RBP22.95■■□□□ 1.26
SEPT9-208ENST00000541152 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
SEPT9-208ENST00000541152 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
SEPT9-208ENST00000541152 MYT1Q01538 1121 aa22.85■■□□□ 1.25
SEPT9-208ENST00000541152 SMARCA4P51532 1647 aa22.77■■□□□ 1.23
SEPT9-208ENST00000541152 ZNF316A6NFI3 1004 aaPredicted RBP22.72■■□□□ 1.23
SEPT9-208ENST00000541152 UBTFP17480 764 aaKnown RBP22.7■■□□□ 1.22
SEPT9-208ENST00000541152 CEP162Q5TB80 1403 aa22.64■■□□□ 1.21
SEPT9-208ENST00000541152 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
SEPT9-208ENST00000541152 MIER1Q8N108 512 aa22.63■■□□□ 1.21
SEPT9-208ENST00000541152 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
SEPT9-208ENST00000541152 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
SEPT9-208ENST00000541152 SOGA1O94964 1423 aa22.58■■□□□ 1.2
SEPT9-208ENST00000541152 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
SEPT9-208ENST00000541152 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.19
SEPT9-208ENST00000541152 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
SEPT9-208ENST00000541152 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
SEPT9-208ENST00000541152 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
SEPT9-208ENST00000541152 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
SEPT9-208ENST00000541152 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
SEPT9-208ENST00000541152 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
SEPT9-208ENST00000541152 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
SEPT9-208ENST00000541152 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
SEPT9-208ENST00000541152 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
SEPT9-208ENST00000541152 APLP2Q06481 763 aa22.23■■□□□ 1.15
SEPT9-208ENST00000541152 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
SEPT9-208ENST00000541152 EEA1Q15075 1411 aa22.13■■□□□ 1.13
SEPT9-208ENST00000541152 CLIP1P30622 1438 aa22.11■■□□□ 1.13
SEPT9-208ENST00000541152 SUPT16HQ9Y5B9 1047 aaKnown RBP22.07■■□□□ 1.12
SEPT9-208ENST00000541152 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
SEPT9-208ENST00000541152 CEP164Q9UPV0 1460 aa21.98■■□□□ 1.11
SEPT9-208ENST00000541152 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
SEPT9-208ENST00000541152 ITGAEP38570 1179 aa21.93■■□□□ 1.1
SEPT9-208ENST00000541152 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
SEPT9-208ENST00000541152 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
SEPT9-208ENST00000541152 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
SEPT9-208ENST00000541152 BCANQ96GW7 911 aa21.9■■□□□ 1.1
SEPT9-208ENST00000541152 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.09
SEPT9-208ENST00000541152 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
SEPT9-208ENST00000541152 TSHZ2Q9NRE2 1034 aa21.87■■□□□ 1.09
SEPT9-208ENST00000541152 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
SEPT9-208ENST00000541152 CC2D2AQ9P2K1 1620 aa21.83■■□□□ 1.09
SEPT9-208ENST00000541152 KIF21BO75037 1637 aa21.79■■□□□ 1.08
SEPT9-208ENST00000541152 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
SEPT9-208ENST00000541152 ANP32EQ9BTT0 268 aa21.69■■□□□ 1.06
SEPT9-208ENST00000541152 FKBP8Q14318 412 aa21.67■■□□□ 1.06
SEPT9-208ENST00000541152 DDX10Q13206 875 aaKnown RBP21.65■■□□□ 1.06
SEPT9-208ENST00000541152 CFTRP13569 1480 aa21.65■■□□□ 1.06
SEPT9-208ENST00000541152 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
SEPT9-208ENST00000541152 TOP2BQ02880 1626 aa21.58■■□□□ 1.04
SEPT9-208ENST00000541152 DNAJC5BQ9UF47 199 aa21.57■■□□□ 1.04
SEPT9-208ENST00000541152 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
SEPT9-208ENST00000541152 SIN3AQ96ST3 1273 aa21.55■■□□□ 1.04
SEPT9-208ENST00000541152 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
SEPT9-208ENST00000541152 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
SEPT9-208ENST00000541152 CUX1P39880 1505 aa21.55■■□□□ 1.04
SEPT9-208ENST00000541152 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
SEPT9-208ENST00000541152 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
SEPT9-208ENST00000541152 RAB3GAP2Q9H2M9 1393 aa21.49■■□□□ 1.03
SEPT9-208ENST00000541152 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
SEPT9-208ENST00000541152 RRBP1Q9P2E9 1410 aaKnown RBP21.47■■□□□ 1.03
SEPT9-208ENST00000541152 NESP48681 1621 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms