Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 EIF3M-209ENST00000531186 565 ntTSL 221.48■■□□□ 1.035e-13■□□□□ 8.5
DROSHAQ9NRR4 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)18.25■□□□□ 0.515e-13■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-205ENST00000525782 2236 ntTSL 218.01■□□□□ 0.475e-13■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-202ENST00000524711 1645 ntTSL 216.7■□□□□ 0.265e-13■□□□□ 8.5
DROSHAQ9NRR4 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.285e-13■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.365e-13■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-207ENST00000530026 769 ntTSL 26.34□□□□□ -1.395e-13■□□□□ 8.5
DROSHAQ9NRR4 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.954e-6■□□□□ 8.5
DROSHAQ9NRR4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC24.92■■□□□ 1.584e-14■□□□□ 8.5
DROSHAQ9NRR4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.184e-14■□□□□ 8.5
DROSHAQ9NRR4 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC13.83□□□□□ -0.24e-14■□□□□ 8.5
DROSHAQ9NRR4 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.564e-14■□□□□ 8.5
DROSHAQ9NRR4 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC10.47□□□□□ -0.734e-14■□□□□ 8.5
DROSHAQ9NRR4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.87□□□□□ -0.994e-14■□□□□ 8.5
DROSHAQ9NRR4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.831e-6■□□□□ 8.5
DROSHAQ9NRR4 CPED1-207ENST00000466055 543 ntTSL 39.36□□□□□ -0.911e-6■□□□□ 8.5
DROSHAQ9NRR4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.35□□□□□ -0.911e-6■□□□□ 8.5
DROSHAQ9NRR4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.83□□□□□ -11e-6■□□□□ 8.5
DROSHAQ9NRR4 DIAPH1-213ENST00000523100 1180 ntTSL 536.72■■■■□ 3.478e-6■□□□□ 8.4
DROSHAQ9NRR4 LIN54-208ENST00000509748 729 ntTSL 532.75■■■□□ 2.838e-6■□□□□ 8.4
DROSHAQ9NRR4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC27.45■■□□□ 1.998e-6■□□□□ 8.4
DROSHAQ9NRR4 VAV2-204ENST00000472905 506 ntTSL 325.49■■□□□ 1.678e-6■□□□□ 8.4
DROSHAQ9NRR4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.528e-6■□□□□ 8.4
DROSHAQ9NRR4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.428e-6■□□□□ 8.4
DROSHAQ9NRR4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.098e-6■□□□□ 8.4
DROSHAQ9NRR4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.938e-6■□□□□ 8.4
DROSHAQ9NRR4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.898e-6■□□□□ 8.4
DROSHAQ9NRR4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.838e-6■□□□□ 8.4
DROSHAQ9NRR4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.788e-6■□□□□ 8.4
DROSHAQ9NRR4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.788e-6■□□□□ 8.4
DROSHAQ9NRR4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.788e-6■□□□□ 8.4
DROSHAQ9NRR4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.728e-6■□□□□ 8.4
DROSHAQ9NRR4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.688e-6■□□□□ 8.4
DROSHAQ9NRR4 LIN54-210ENST00000510877 4507 ntTSL 1 (best)17.07■□□□□ 0.328e-6■□□□□ 8.4
DROSHAQ9NRR4 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.188e-6■□□□□ 8.4
DROSHAQ9NRR4 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.098e-6■□□□□ 8.4
DROSHAQ9NRR4 LIN54-203ENST00000446851 4083 ntTSL 1 (best) BASIC14.81□□□□□ -0.048e-6■□□□□ 8.4
DROSHAQ9NRR4 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.748e-6■□□□□ 8.4
DROSHAQ9NRR4 GTPBP2-206ENST00000452781 681 ntTSL 532.17■■■□□ 2.743e-15■□□□□ 8.4
DROSHAQ9NRR4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC27.22■■□□□ 1.957e-8■□□□□ 8.4
DROSHAQ9NRR4 H2AFZ-202ENST00000511203 1880 ntTSL 245.33■■■■■ 4.852e-7■□□□□ 8.4
DROSHAQ9NRR4 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)44.52■■■■■ 4.722e-7■□□□□ 8.4
DROSHAQ9NRR4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.752e-7■□□□□ 8.4
DROSHAQ9NRR4 H2AFZ-205ENST00000527366 435 ntTSL 320.39■□□□□ 0.852e-7■□□□□ 8.4
DROSHAQ9NRR4 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)20.12■□□□□ 0.812e-7■□□□□ 8.4
DROSHAQ9NRR4 H2AFZ-206ENST00000529158 726 ntTSL 316■□□□□ 0.152e-7■□□□□ 8.4
DROSHAQ9NRR4 CALR-205ENST00000587486 957 ntTSL 225.83■■□□□ 1.732e-38■□□□□ 8.4
DROSHAQ9NRR4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.382e-38■□□□□ 8.4
DROSHAQ9NRR4 CALR-207ENST00000590325 781 ntTSL 221.93■■□□□ 1.12e-38■□□□□ 8.4
DROSHAQ9NRR4 CALR-206ENST00000588454 776 ntTSL 317.86■□□□□ 0.452e-38■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC22.18■■□□□ 1.147e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.47e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-209ENST00000538654 2768 ntTSL 212.4□□□□□ -0.427e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC11.83□□□□□ -0.527e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC9.73□□□□□ -0.857e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-225ENST00000545920 625 ntTSL 29.34□□□□□ -0.917e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.38□□□□□ -1.077e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.89□□□□□ -1.157e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-214ENST00000540865 784 ntTSL 57.58□□□□□ -1.27e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-220ENST00000544550 636 ntTSL 26.75□□□□□ -1.337e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.47□□□□□ -1.377e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.98□□□□□ -1.457e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-201ENST00000535076 849 ntTSL 25.65□□□□□ -1.517e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.08□□□□□ -1.67e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.05□□□□□ -1.67e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-202ENST00000535689 550 ntTSL 24.54□□□□□ -1.687e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.54□□□□□ -1.687e-33■□□□□ 8.4
DROSHAQ9NRR4 SNHG1-224ENST00000545688 610 ntTSL 34.06□□□□□ -1.767e-33■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC33.41■■■□□ 2.941e-6■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC32.48■■■□□ 2.791e-6■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC32■■■□□ 2.711e-6■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-203ENST00000367450 1355 ntTSL 529.78■■■□□ 2.361e-6■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC29.02■■■□□ 2.241e-6■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-208ENST00000417752 577 ntTSL 522.84■■□□□ 1.251e-6■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.581e-6■□□□□ 8.4
DROSHAQ9NRR4 UCHL5-210ENST00000421683 834 ntTSL 316.67■□□□□ 0.261e-6■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-222ENST00000630907 889 ntTSL 539.76■■■■□ 3.966e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-213ENST00000626793 733 ntTSL 536.23■■■■□ 3.396e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-208ENST00000625681 654 ntTSL 536.23■■■■□ 3.396e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-218ENST00000629252 1112 ntTSL 532.28■■■□□ 2.766e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-215ENST00000628267 779 ntTSL 531.94■■■□□ 2.76e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-214ENST00000627018 474 ntTSL 331.19■■■□□ 2.586e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.16e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC18.73■□□□□ 0.596e-7■□□□□ 8.4
DROSHAQ9NRR4 UVSSA-204ENST00000505716 549 ntTSL 318.06■□□□□ 0.487e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.276e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.216e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.216e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.096e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.39■□□□□ 0.056e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.186e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.236e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.786e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-219ENST00000629886 436 ntTSL 38.34□□□□□ -1.076e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.296e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.97□□□□□ -1.456e-7■□□□□ 8.4
DROSHAQ9NRR4 UBE3A-216ENST00000628733 706 ntTSL 52.49□□□□□ -2.016e-7■□□□□ 8.4
DROSHAQ9NRR4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.657e-8■□□□□ 8.4
DROSHAQ9NRR4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.277e-8■□□□□ 8.4
DROSHAQ9NRR4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.077e-8■□□□□ 8.4
Retrieved 100 of 16,331 protein–RNA pairs in 223.9 ms