RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
LIN54-203ENST00000446851 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
LIN54-203ENST00000446851 ABCC9O60706 1549 aa20.24■□□□□ 0.83
LIN54-203ENST00000446851 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
LIN54-203ENST00000446851 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
LIN54-203ENST00000446851 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
LIN54-203ENST00000446851 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.66
LIN54-203ENST00000446851 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
LIN54-203ENST00000446851 NACADO15069 1562 aa18.96■□□□□ 0.63
LIN54-203ENST00000446851 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
LIN54-203ENST00000446851 DCAF1Q9Y4B6 1507 aa18.67■□□□□ 0.58
LIN54-203ENST00000446851 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
LIN54-203ENST00000446851 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
LIN54-203ENST00000446851 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
LIN54-203ENST00000446851 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
LIN54-203ENST00000446851 UNC13AQ9UPW8 1703 aa18.25■□□□□ 0.51
LIN54-203ENST00000446851 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
LIN54-203ENST00000446851 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
LIN54-203ENST00000446851 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
LIN54-203ENST00000446851 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
LIN54-203ENST00000446851 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
LIN54-203ENST00000446851 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
LIN54-203ENST00000446851 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
LIN54-203ENST00000446851 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
LIN54-203ENST00000446851 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
LIN54-203ENST00000446851 WIZO95785 1651 aa17.69■□□□□ 0.42
LIN54-203ENST00000446851 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
LIN54-203ENST00000446851 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
LIN54-203ENST00000446851 ERCC6Q03468 1493 aa17.52■□□□□ 0.39
LIN54-203ENST00000446851 NESP48681 1621 aa17.45■□□□□ 0.38
LIN54-203ENST00000446851 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
LIN54-203ENST00000446851 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
LIN54-203ENST00000446851 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
LIN54-203ENST00000446851 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
LIN54-203ENST00000446851 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
LIN54-203ENST00000446851 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
LIN54-203ENST00000446851 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
LIN54-203ENST00000446851 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
LIN54-203ENST00000446851 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
LIN54-203ENST00000446851 FBLN2P98095 1184 aa17.21■□□□□ 0.35
LIN54-203ENST00000446851 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
LIN54-203ENST00000446851 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
LIN54-203ENST00000446851 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
LIN54-203ENST00000446851 CFTRP13569 1480 aa17.09■□□□□ 0.33
LIN54-203ENST00000446851 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
LIN54-203ENST00000446851 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.31
LIN54-203ENST00000446851 TTBK1Q5TCY1 1321 aaPredicted RBP17■□□□□ 0.31
LIN54-203ENST00000446851 ABCC8Q09428 1581 aa17■□□□□ 0.31
LIN54-203ENST00000446851 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
LIN54-203ENST00000446851 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
LIN54-203ENST00000446851 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
LIN54-203ENST00000446851 SOGA1O94964 1423 aa16.89■□□□□ 0.29
LIN54-203ENST00000446851 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
LIN54-203ENST00000446851 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
LIN54-203ENST00000446851 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
LIN54-203ENST00000446851 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
LIN54-203ENST00000446851 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.29
LIN54-203ENST00000446851 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
LIN54-203ENST00000446851 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIN54-203ENST00000446851 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
LIN54-203ENST00000446851 CUX2O14529 1486 aa16.77■□□□□ 0.28
LIN54-203ENST00000446851 CUX1P39880 1505 aa16.73■□□□□ 0.27
LIN54-203ENST00000446851 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
LIN54-203ENST00000446851 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
LIN54-203ENST00000446851 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
LIN54-203ENST00000446851 LOC105371045A0A1W2PR82 267 aa16.68■□□□□ 0.26
LIN54-203ENST00000446851 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
LIN54-203ENST00000446851 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
LIN54-203ENST00000446851 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
LIN54-203ENST00000446851 P3H3Q8IVL6 736 aa16.64■□□□□ 0.25
LIN54-203ENST00000446851 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
LIN54-203ENST00000446851 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
LIN54-203ENST00000446851 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
LIN54-203ENST00000446851 WDR62O43379 1518 aa16.6■□□□□ 0.25
LIN54-203ENST00000446851 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
LIN54-203ENST00000446851 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
LIN54-203ENST00000446851 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
LIN54-203ENST00000446851 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
LIN54-203ENST00000446851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
LIN54-203ENST00000446851 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
LIN54-203ENST00000446851 CARMIL1Q5VZK9 1371 aa16.52■□□□□ 0.24
LIN54-203ENST00000446851 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
LIN54-203ENST00000446851 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
LIN54-203ENST00000446851 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
LIN54-203ENST00000446851 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
LIN54-203ENST00000446851 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
LIN54-203ENST00000446851 IGF1RP08069 1367 aa16.46■□□□□ 0.23
LIN54-203ENST00000446851 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
LIN54-203ENST00000446851 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
LIN54-203ENST00000446851 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
LIN54-203ENST00000446851 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
LIN54-203ENST00000446851 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
LIN54-203ENST00000446851 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
LIN54-203ENST00000446851 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
LIN54-203ENST00000446851 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
LIN54-203ENST00000446851 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIN54-203ENST00000446851 APLP2Q06481 763 aa16.3■□□□□ 0.2
LIN54-203ENST00000446851 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
LIN54-203ENST00000446851 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
LIN54-203ENST00000446851 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms