RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
SNHG1-218ENST00000541615 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
SNHG1-218ENST00000541615 SENP3Q9H4L4 574 aaPredicted RBP12.77□□□□□ -0.37
SNHG1-218ENST00000541615 PHF23Q9BUL5 403 aaPredicted RBP12.56□□□□□ -0.4
SNHG1-218ENST00000541615 FOXD1Q16676 465 aa11.87□□□□□ -0.51
SNHG1-218ENST00000541615 PLPPR3Q6T4P5 718 aa11.26□□□□□ -0.61
SNHG1-218ENST00000541615 MSH5O43196 834 aa11.19□□□□□ -0.62
SNHG1-218ENST00000541615 PIAS4Q8N2W9 510 aaPredicted RBP11.08□□□□□ -0.64
SNHG1-218ENST00000541615 PPP6R1Q9UPN7 881 aa11.02□□□□□ -0.65
SNHG1-218ENST00000541615 POTEDQ86YR6 584 aa10.99□□□□□ -0.65
SNHG1-218ENST00000541615 ADRA2BP18089 450 aa10.98□□□□□ -0.65
SNHG1-218ENST00000541615 SCAF1Q9H7N4 1312 aaKnown RBP10.11□□□□□ -0.79
SNHG1-218ENST00000541615 DMRT2Q9Y5R5 561 aa10.11□□□□□ -0.79
SNHG1-218ENST00000541615 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
SNHG1-218ENST00000541615 PPP4R3CPQ6ZMV5 832 aa9.83□□□□□ -0.84
SNHG1-218ENST00000541615 HOXD11P31277 338 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-218ENST00000541615 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
SNHG1-218ENST00000541615 MYT1Q01538 1121 aa9.67□□□□□ -0.86
SNHG1-218ENST00000541615 PELP1Q8IZL8 1130 aaKnown RBP9.64□□□□□ -0.87
SNHG1-218ENST00000541615 DCAF8L1A6NGE4 600 aa9.63□□□□□ -0.87
SNHG1-218ENST00000541615 RNF216Q9NWF9 866 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-218ENST00000541615 CACNB1Q02641 598 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-218ENST00000541615 RNF39Q9H2S5 420 aa9.52□□□□□ -0.89
SNHG1-218ENST00000541615 DNAJC5BQ9UF47 199 aa9.47□□□□□ -0.89
SNHG1-218ENST00000541615 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.9
SNHG1-218ENST00000541615 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
SNHG1-218ENST00000541615 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-218ENST00000541615 NPM3O75607 178 aaKnown RBP9.29□□□□□ -0.92
SNHG1-218ENST00000541615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNHG1-218ENST00000541615 KCNA4P22459 653 aa9.03□□□□□ -0.96
SNHG1-218ENST00000541615 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
SNHG1-218ENST00000541615 CAPN15O75808 1086 aa8.89□□□□□ -0.99
SNHG1-218ENST00000541615 SLC4A2P04920 1241 aa8.89□□□□□ -0.99
SNHG1-218ENST00000541615 SPINK5Q9NQ38 1064 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-218ENST00000541615 DSG3P32926 999 aa8.88□□□□□ -0.99
SNHG1-218ENST00000541615 APLP2Q06481 763 aa8.83□□□□□ -1
SNHG1-218ENST00000541615 ERICH6Q7L0X2 663 aa8.82□□□□□ -1
SNHG1-218ENST00000541615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.8□□□□□ -1
SNHG1-218ENST00000541615 HNRNPUL2Q1KMD3 747 aaKnown RBP8.8□□□□□ -1
SNHG1-218ENST00000541615 ZNF219Q9P2Y4 722 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-218ENST00000541615 SLC24A1O60721 1099 aa8.73□□□□□ -1.01
SNHG1-218ENST00000541615 SAMD1Q6SPF0 538 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-218ENST00000541615 TRHP20396 242 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-218ENST00000541615 ABCB7O75027 752 aa8.65□□□□□ -1.02
SNHG1-218ENST00000541615 MYCNP04198 464 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-218ENST00000541615 POTEHQ6S545 545 aa8.61□□□□□ -1.03
SNHG1-218ENST00000541615 RBM42Q9BTD8 480 aaKnown RBP8.52□□□□□ -1.05
SNHG1-218ENST00000541615 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
SNHG1-218ENST00000541615 PRKCSHP14314 528 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-218ENST00000541615 POLA2Q14181 598 aa8.48□□□□□ -1.05
SNHG1-218ENST00000541615 FOXD4L1Q9NU39 408 aa8.48□□□□□ -1.05
SNHG1-218ENST00000541615 HRCP23327 699 aa8.46□□□□□ -1.06
SNHG1-218ENST00000541615 DAXXQ9UER7 740 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-218ENST00000541615 ZBTB12Q9Y330 459 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-218ENST00000541615 ATF5Q9Y2D1 282 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-218ENST00000541615 CHRDL2Q6WN34 429 aa8.32□□□□□ -1.08
SNHG1-218ENST00000541615 ZBTB22O15209 634 aa8.29□□□□□ -1.08
SNHG1-218ENST00000541615 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
SNHG1-218ENST00000541615 ATXN8OSP0DMR3 200 aa8.28□□□□□ -1.08
SNHG1-218ENST00000541615 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
SNHG1-218ENST00000541615 CENPBP07199 599 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-218ENST00000541615 OSCARQ8IYS5 282 aa8.21□□□□□ -1.1
SNHG1-218ENST00000541615 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-218ENST00000541615 FBLN2P98095 1184 aa8.1□□□□□ -1.11
SNHG1-218ENST00000541615 PIP4P2Q8N4L2 257 aa8.1□□□□□ -1.11
SNHG1-218ENST00000541615 SPDYE2BA6NHP3 402 aa8.09□□□□□ -1.11
SNHG1-218ENST00000541615 PITPNM1O00562 1244 aa8.09□□□□□ -1.11
SNHG1-218ENST00000541615 SPDYE6P0CI01 402 aa8.09□□□□□ -1.11
SNHG1-218ENST00000541615 SPDYE2Q495Y8 402 aa8.09□□□□□ -1.11
SNHG1-218ENST00000541615 EIF5BO60841 1220 aaKnown RBP8.07□□□□□ -1.12
SNHG1-218ENST00000541615 ZEB1P37275 1124 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-218ENST00000541615 FXR2P51116 673 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNHG1-218ENST00000541615 FAM9AQ8IZU1 332 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-218ENST00000541615 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-218ENST00000541615 MKRN4PQ13434 485 aaPredicted RBP8□□□□□ -1.13
SNHG1-218ENST00000541615 ACIN1Q9UKV3 1341 aaKnown RBP7.99□□□□□ -1.13
SNHG1-218ENST00000541615 ANP32EQ9BTT0 268 aa7.97□□□□□ -1.13
SNHG1-218ENST00000541615 SSUH2Q9Y2M2 353 aa7.97□□□□□ -1.13
SNHG1-218ENST00000541615 SPDYE1Q8NFV5 336 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-218ENST00000541615 HAX1O00165 279 aa7.95□□□□□ -1.14
SNHG1-218ENST00000541615 ZNF692Q9BU19 519 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-218ENST00000541615 CLEC11AQ9Y240 323 aa7.9□□□□□ -1.14
SNHG1-218ENST00000541615 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
SNHG1-218ENST00000541615 UBE2Q2Q8WVN8 375 aa7.88□□□□□ -1.15
SNHG1-218ENST00000541615 PRKAR2AP13861 404 aaKnown RBP7.87□□□□□ -1.15
SNHG1-218ENST00000541615 RANGAP1P46060 587 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-218ENST00000541615 CSRNP3Q8WYN3 585 aa7.85□□□□□ -1.15
SNHG1-218ENST00000541615 CLSPNQ9HAW4 1339 aa7.84□□□□□ -1.15
SNHG1-218ENST00000541615 EVX2Q03828 476 aa7.83□□□□□ -1.16
SNHG1-218ENST00000541615 PABPN1Q86U42 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
SNHG1-218ENST00000541615 PPARGC1BQ86YN6 1023 aaKnown RBP7.82□□□□□ -1.16
SNHG1-218ENST00000541615 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
SNHG1-218ENST00000541615 C19orf67A6NJJ6 358 aa7.8□□□□□ -1.16
SNHG1-218ENST00000541615 ERICH6BQ5W0A0 696 aa7.8□□□□□ -1.16
SNHG1-218ENST00000541615 PRR29P0C7W0 189 aa7.78□□□□□ -1.16
SNHG1-218ENST00000541615 ARXQ96QS3 562 aa7.77□□□□□ -1.17
SNHG1-218ENST00000541615 PCGF6Q9BYE7 350 aa7.75□□□□□ -1.17
SNHG1-218ENST00000541615 CHADLQ6NUI6 762 aa7.74□□□□□ -1.17
SNHG1-218ENST00000541615 NEUROD1Q13562 356 aa7.73□□□□□ -1.17
SNHG1-218ENST00000541615 GABBR2O75899 941 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms