RNA–Protein interactions for RNA: ENST00000287957.3

GATAD1-201, Transcript of GATA zinc finger domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATAD1, Length 3,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATAD1-201ENST00000287957 NISCHQ9Y2I1 1504 aa32.78■■■□□ 2.84
GATAD1-201ENST00000287957 HRCP23327 699 aa31.66■■■□□ 2.66
GATAD1-201ENST00000287957 PPARGC1BQ86YN6 1023 aaKnown RBP31.5■■■□□ 2.63
GATAD1-201ENST00000287957 PCGF6Q9BYE7 350 aa31.2■■■□□ 2.59
GATAD1-201ENST00000287957 PELP1Q8IZL8 1130 aaKnown RBP31.09■■■□□ 2.57
GATAD1-201ENST00000287957 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
GATAD1-201ENST00000287957 SHROOM4Q9ULL8 1493 aa30.64■■■□□ 2.5
GATAD1-201ENST00000287957 SCAF1Q9H7N4 1312 aaKnown RBP30.43■■■□□ 2.46
GATAD1-201ENST00000287957 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.42
GATAD1-201ENST00000287957 CHIC1Q5VXU3 224 aa29.97■■■□□ 2.39
GATAD1-201ENST00000287957 MYT1Q01538 1121 aa29.9■■■□□ 2.38
GATAD1-201ENST00000287957 LOC105371045A0A1W2PR82 267 aa29.75■■■□□ 2.35
GATAD1-201ENST00000287957 TRIM26Q12899 539 aaPredicted RBP29.6■■■□□ 2.33
GATAD1-201ENST00000287957 NEUROD1Q13562 356 aa29.48■■■□□ 2.31
GATAD1-201ENST00000287957 GTF3C3Q9Y5Q9 886 aa29.45■■■□□ 2.3
GATAD1-201ENST00000287957 ACIN1Q9UKV3 1341 aaKnown RBP29.41■■■□□ 2.3
GATAD1-201ENST00000287957 ZEB1P37275 1124 aaPredicted RBP29.37■■■□□ 2.29
GATAD1-201ENST00000287957 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
GATAD1-201ENST00000287957 CENPBP07199 599 aaPredicted RBP29.01■■■□□ 2.24
GATAD1-201ENST00000287957 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
GATAD1-201ENST00000287957 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
GATAD1-201ENST00000287957 YTHDC1Q96MU7 727 aaKnown RBP28.84■■■□□ 2.21
GATAD1-201ENST00000287957 DIEXFQ68CQ4 756 aaKnown RBP28.76■■■□□ 2.19
GATAD1-201ENST00000287957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.73■■■□□ 2.19
GATAD1-201ENST00000287957 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
GATAD1-201ENST00000287957 FAM9AQ8IZU1 332 aaPredicted RBP28.66■■■□□ 2.18
GATAD1-201ENST00000287957 CCER1Q8TC90 406 aaPredicted RBP28.63■■■□□ 2.17
GATAD1-201ENST00000287957 BCL11AQ9H165 835 aa28.47■■■□□ 2.15
GATAD1-201ENST00000287957 TTBK1Q5TCY1 1321 aaPredicted RBP28.3■■■□□ 2.12
GATAD1-201ENST00000287957 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
GATAD1-201ENST00000287957 MIER1Q8N108 512 aa28.01■■■□□ 2.07
GATAD1-201ENST00000287957 ANP32EQ9BTT0 268 aa28■■■□□ 2.07
GATAD1-201ENST00000287957 CSRNP3Q8WYN3 585 aa27.93■■■□□ 2.06
GATAD1-201ENST00000287957 ZNF316A6NFI3 1004 aaPredicted RBP27.92■■■□□ 2.06
GATAD1-201ENST00000287957 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
GATAD1-201ENST00000287957 TSHZ2Q9NRE2 1034 aa27.73■■■□□ 2.03
GATAD1-201ENST00000287957 SUPT16HQ9Y5B9 1047 aaKnown RBP27.7■■■□□ 2.03
GATAD1-201ENST00000287957 PRKCSHP14314 528 aaPredicted RBP27.64■■■□□ 2.01
GATAD1-201ENST00000287957 BCANQ96GW7 911 aa27.58■■■□□ 2.01
GATAD1-201ENST00000287957 HNRNPUL2Q1KMD3 747 aaKnown RBP27.29■■□□□ 1.96
GATAD1-201ENST00000287957 FKBP8Q14318 412 aa27.08■■□□□ 1.93
GATAD1-201ENST00000287957 RBM19Q9Y4C8 960 aaKnown RBP27.08■■□□□ 1.92
GATAD1-201ENST00000287957 ITGAEP38570 1179 aa27.07■■□□□ 1.92
GATAD1-201ENST00000287957 CLSPNQ9HAW4 1339 aa27.05■■□□□ 1.92
GATAD1-201ENST00000287957 KCNH8Q96L42 1107 aa26.97■■□□□ 1.91
GATAD1-201ENST00000287957 ERICH6Q7L0X2 663 aa26.96■■□□□ 1.91
GATAD1-201ENST00000287957 MSH5O43196 834 aa26.88■■□□□ 1.89
GATAD1-201ENST00000287957 RB1CC1Q8TDY2 1594 aa26.83■■□□□ 1.89
GATAD1-201ENST00000287957 ANO8Q9HCE9 1232 aaPredicted RBP26.83■■□□□ 1.89
GATAD1-201ENST00000287957 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
GATAD1-201ENST00000287957 UBTFP17480 764 aaKnown RBP26.79■■□□□ 1.88
GATAD1-201ENST00000287957 NEFLP07196 543 aa26.76■■□□□ 1.87
GATAD1-201ENST00000287957 ABCC9O60706 1549 aa26.7■■□□□ 1.86
GATAD1-201ENST00000287957 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
GATAD1-201ENST00000287957 DEKP35659 375 aaKnown RBP26.64■■□□□ 1.85
GATAD1-201ENST00000287957 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
GATAD1-201ENST00000287957 TRIM52Q96A61 297 aa26.6■■□□□ 1.85
GATAD1-201ENST00000287957 CCDC136Q96JN2 1154 aa26.58■■□□□ 1.85
GATAD1-201ENST00000287957 IRX6P78412 446 aaPredicted RBP26.52■■□□□ 1.84
GATAD1-201ENST00000287957 NBR1Q14596 966 aa26.52■■□□□ 1.84
GATAD1-201ENST00000287957 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
GATAD1-201ENST00000287957 SALL2Q9Y467 1007 aaPredicted RBP26.49■■□□□ 1.83
GATAD1-201ENST00000287957 RTN4Q9NQC3 1192 aaKnown RBP26.41■■□□□ 1.82
GATAD1-201ENST00000287957 APLP2Q06481 763 aa26.4■■□□□ 1.82
GATAD1-201ENST00000287957 DDX10Q13206 875 aaKnown RBP26.4■■□□□ 1.82
GATAD1-201ENST00000287957 CDK11AQ9UQ88 783 aaPredicted RBP26.37■■□□□ 1.81
GATAD1-201ENST00000287957 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.34■■□□□ 1.81
GATAD1-201ENST00000287957 HIRIP3Q9BW71 556 aaPredicted RBP26.27■■□□□ 1.8
GATAD1-201ENST00000287957 FANCIQ9NVI1 1328 aa26.26■■□□□ 1.79
GATAD1-201ENST00000287957 SOGA1O94964 1423 aa26.23■■□□□ 1.79
GATAD1-201ENST00000287957 TNIKQ9UKE5 1360 aa26.23■■□□□ 1.79
GATAD1-201ENST00000287957 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
GATAD1-201ENST00000287957 CCDC88BA6NC98 1476 aa26.18■■□□□ 1.78
GATAD1-201ENST00000287957 IL27Q8NEV9 243 aa26.16■■□□□ 1.78
GATAD1-201ENST00000287957 DHX57Q6P158 1386 aaKnown RBP26.16■■□□□ 1.78
GATAD1-201ENST00000287957 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
GATAD1-201ENST00000287957 MYT1LQ9UL68 1186 aa26.13■■□□□ 1.77
GATAD1-201ENST00000287957 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
GATAD1-201ENST00000287957 PAK3O75914 559 aaPredicted RBP26.06■■□□□ 1.76
GATAD1-201ENST00000287957 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
GATAD1-201ENST00000287957 NOP58Q9Y2X3 529 aaKnown RBP26.01■■□□□ 1.75
GATAD1-201ENST00000287957 RTL5Q5HYW3 569 aaPredicted RBP26■■□□□ 1.75
GATAD1-201ENST00000287957 ANP32CO43423 234 aa25.98■■□□□ 1.75
GATAD1-201ENST00000287957 HNRNPUQ00839 825 aaKnown RBP eCLIP25.98■■□□□ 1.75
GATAD1-201ENST00000287957 EIF5BO60841 1220 aaKnown RBP25.96■■□□□ 1.75
GATAD1-201ENST00000287957 B4GALNT3Q6L9W6 998 aa25.96■■□□□ 1.75
GATAD1-201ENST00000287957 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
GATAD1-201ENST00000287957 CLIP1P30622 1438 aa25.87■■□□□ 1.73
GATAD1-201ENST00000287957 ERICH6BQ5W0A0 696 aa25.84■■□□□ 1.73
GATAD1-201ENST00000287957 SIN3AQ96ST3 1273 aa25.83■■□□□ 1.73
GATAD1-201ENST00000287957 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
GATAD1-201ENST00000287957 WIZO95785 1651 aa25.81■■□□□ 1.72
GATAD1-201ENST00000287957 UBE2Q2Q8WVN8 375 aa25.76■■□□□ 1.72
GATAD1-201ENST00000287957 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
GATAD1-201ENST00000287957 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
GATAD1-201ENST00000287957 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
GATAD1-201ENST00000287957 PPP4R2Q9NY27 417 aa25.73■■□□□ 1.71
GATAD1-201ENST00000287957 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
GATAD1-201ENST00000287957 CCER2I3L3R5 266 aa25.7■■□□□ 1.7
GATAD1-201ENST00000287957 ZBTB47Q9UFB7 747 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms