RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
CALR-201ENST00000316448 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
CALR-201ENST00000316448 ZCCHC6Q5VYS8 1495 aaKnown RBP30.03■■■□□ 2.4
CALR-201ENST00000316448 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
CALR-201ENST00000316448 ABCC9O60706 1549 aa29.62■■■□□ 2.33
CALR-201ENST00000316448 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
CALR-201ENST00000316448 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
CALR-201ENST00000316448 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.26
CALR-201ENST00000316448 NACADO15069 1562 aa29■■■□□ 2.23
CALR-201ENST00000316448 RB1CC1Q8TDY2 1594 aa28.76■■■□□ 2.19
CALR-201ENST00000316448 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
CALR-201ENST00000316448 UNC13AQ9UPW8 1703 aa28.24■■■□□ 2.11
CALR-201ENST00000316448 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
CALR-201ENST00000316448 BICRAQ9NZM4 1560 aa28.02■■■□□ 2.08
CALR-201ENST00000316448 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.073e-7■□□□□ 8.9
CALR-201ENST00000316448 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
CALR-201ENST00000316448 RSF1Q96T23 1441 aaPredicted RBP27.79■■■□□ 2.04
CALR-201ENST00000316448 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.02
CALR-201ENST00000316448 BAZ1AQ9NRL2 1556 aaPredicted RBP27.56■■■□□ 2
CALR-201ENST00000316448 SMARCA4P51532 1647 aa27.48■■□□□ 1.99
CALR-201ENST00000316448 WIZO95785 1651 aa27.45■■□□□ 1.98
CALR-201ENST00000316448 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
CALR-201ENST00000316448 EIF4G1Q04637 1599 aaKnown RBP27.12■■□□□ 1.93
CALR-201ENST00000316448 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
CALR-201ENST00000316448 TOP2AP11388 1531 aaKnown RBP27.09■■□□□ 1.93
CALR-201ENST00000316448 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
CALR-201ENST00000316448 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
CALR-201ENST00000316448 CCDC88BA6NC98 1476 aa26.9■■□□□ 1.9
CALR-201ENST00000316448 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
CALR-201ENST00000316448 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
CALR-201ENST00000316448 CC2D2AQ9P2K1 1620 aa26.74■■□□□ 1.87
CALR-201ENST00000316448 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
CALR-201ENST00000316448 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
CALR-201ENST00000316448 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
CALR-201ENST00000316448 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
CALR-201ENST00000316448 CFTRP13569 1480 aa26.23■■□□□ 1.79
CALR-201ENST00000316448 CADPSQ9ULU8 1353 aa26.16■■□□□ 1.78
CALR-201ENST00000316448 WRNQ14191 1432 aaPredicted RBP eCLIP26.1■■□□□ 1.77
CALR-201ENST00000316448 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
CALR-201ENST00000316448 NESP48681 1621 aa26.03■■□□□ 1.76
CALR-201ENST00000316448 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
CALR-201ENST00000316448 LOC105371045A0A1W2PR82 267 aa25.98■■□□□ 1.75
CALR-201ENST00000316448 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
CALR-201ENST00000316448 CUX1P39880 1505 aa25.88■■□□□ 1.73
CALR-201ENST00000316448 SOGA1O94964 1423 aa25.87■■□□□ 1.73
CALR-201ENST00000316448 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
CALR-201ENST00000316448 FANCD2Q9BXW9 1451 aa25.86■■□□□ 1.73
CALR-201ENST00000316448 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
CALR-201ENST00000316448 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
CALR-201ENST00000316448 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
CALR-201ENST00000316448 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
CALR-201ENST00000316448 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
CALR-201ENST00000316448 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
CALR-201ENST00000316448 CSRNP3Q8WYN3 585 aa25.63■■□□□ 1.69
CALR-201ENST00000316448 EEA1Q15075 1411 aa25.62■■□□□ 1.69
CALR-201ENST00000316448 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
CALR-201ENST00000316448 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
CALR-201ENST00000316448 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
CALR-201ENST00000316448 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
CALR-201ENST00000316448 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.68
CALR-201ENST00000316448 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
CALR-201ENST00000316448 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.66
CALR-201ENST00000316448 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
CALR-201ENST00000316448 CUX2O14529 1486 aa25.41■■□□□ 1.66
CALR-201ENST00000316448 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
CALR-201ENST00000316448 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
CALR-201ENST00000316448 KIF21BO75037 1637 aa25.32■■□□□ 1.64
CALR-201ENST00000316448 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
CALR-201ENST00000316448 IGF1RP08069 1367 aa25.3■■□□□ 1.64
CALR-201ENST00000316448 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
CALR-201ENST00000316448 RAPGEF2Q9Y4G8 1499 aa25.3■■□□□ 1.64
CALR-201ENST00000316448 PRXQ9BXM0 1461 aa25.29■■□□□ 1.64
CALR-201ENST00000316448 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
CALR-201ENST00000316448 TNIKQ9UKE5 1360 aa25.28■■□□□ 1.64
CALR-201ENST00000316448 WDR62O43379 1518 aa25.24■■□□□ 1.63
CALR-201ENST00000316448 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
CALR-201ENST00000316448 TDRD9Q8NDG6 1382 aaKnown RBP25.21■■□□□ 1.63
CALR-201ENST00000316448 TARBP1Q13395 1621 aaKnown RBP25.2■■□□□ 1.62
CALR-201ENST00000316448 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
CALR-201ENST00000316448 ERICH3Q5RHP9 1530 aa25.15■■□□□ 1.62
CALR-201ENST00000316448 CEP162Q5TB80 1403 aa25.14■■□□□ 1.62
CALR-201ENST00000316448 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
CALR-201ENST00000316448 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
CALR-201ENST00000316448 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.61
CALR-201ENST00000316448 AQRO60306 1485 aaKnown RBP eCLIP25.05■■□□□ 1.64e-11■■■□□ 18.6
CALR-201ENST00000316448 IFT140Q96RY7 1462 aa25.05■■□□□ 1.6
CALR-201ENST00000316448 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
CALR-201ENST00000316448 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
CALR-201ENST00000316448 CLIP1P30622 1438 aa24.96■■□□□ 1.59
CALR-201ENST00000316448 CUL7Q14999 1698 aa24.94■■□□□ 1.58
CALR-201ENST00000316448 PBRM1Q86U86 1689 aa24.89■■□□□ 1.57
CALR-201ENST00000316448 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
CALR-201ENST00000316448 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
CALR-201ENST00000316448 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
CALR-201ENST00000316448 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
CALR-201ENST00000316448 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
CALR-201ENST00000316448 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
CALR-201ENST00000316448 ARHGAP35Q9NRY4 1499 aa24.76■■□□□ 1.55
CALR-201ENST00000316448 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
CALR-201ENST00000316448 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms