RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
SNHG1-201ENST00000535076 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
SNHG1-201ENST00000535076 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
SNHG1-201ENST00000535076 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
SNHG1-201ENST00000535076 FOXD1Q16676 465 aa14.87□□□□□ -0.03
SNHG1-201ENST00000535076 PLPPR3Q6T4P5 718 aa14.48□□□□□ -0.09
SNHG1-201ENST00000535076 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
SNHG1-201ENST00000535076 ADRA2BP18089 450 aa14.12□□□□□ -0.15
SNHG1-201ENST00000535076 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
SNHG1-201ENST00000535076 MSH5O43196 834 aa13.68□□□□□ -0.22
SNHG1-201ENST00000535076 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
SNHG1-201ENST00000535076 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
SNHG1-201ENST00000535076 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
SNHG1-201ENST00000535076 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
SNHG1-201ENST00000535076 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
SNHG1-201ENST00000535076 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
SNHG1-201ENST00000535076 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-201ENST00000535076 KCNA4P22459 653 aa12.27□□□□□ -0.45
SNHG1-201ENST00000535076 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
SNHG1-201ENST00000535076 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
SNHG1-201ENST00000535076 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
SNHG1-201ENST00000535076 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
SNHG1-201ENST00000535076 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
SNHG1-201ENST00000535076 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
SNHG1-201ENST00000535076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNHG1-201ENST00000535076 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
SNHG1-201ENST00000535076 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
SNHG1-201ENST00000535076 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
SNHG1-201ENST00000535076 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
SNHG1-201ENST00000535076 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
SNHG1-201ENST00000535076 ZBTB22O15209 634 aa11.36□□□□□ -0.59
SNHG1-201ENST00000535076 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
SNHG1-201ENST00000535076 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
SNHG1-201ENST00000535076 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
SNHG1-201ENST00000535076 CAPN15O75808 1086 aa11.2□□□□□ -0.62
SNHG1-201ENST00000535076 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
SNHG1-201ENST00000535076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
SNHG1-201ENST00000535076 DSG3P32926 999 aa11.13□□□□□ -0.63
SNHG1-201ENST00000535076 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
SNHG1-201ENST00000535076 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
SNHG1-201ENST00000535076 ATF5Q9Y2D1 282 aaPredicted RBP11.1□□□□□ -0.63
SNHG1-201ENST00000535076 ABCB7O75027 752 aa11.04□□□□□ -0.64
SNHG1-201ENST00000535076 APLP2Q06481 763 aa11.04□□□□□ -0.64
SNHG1-201ENST00000535076 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
SNHG1-201ENST00000535076 CSRNP3Q8WYN3 585 aa11.01□□□□□ -0.65
SNHG1-201ENST00000535076 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
SNHG1-201ENST00000535076 POLA2Q14181 598 aa10.88□□□□□ -0.67
SNHG1-201ENST00000535076 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
SNHG1-201ENST00000535076 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
SNHG1-201ENST00000535076 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
SNHG1-201ENST00000535076 ZBTB12Q9Y330 459 aaPredicted RBP10.56□□□□□ -0.72
SNHG1-201ENST00000535076 RBM42Q9BTD8 480 aaKnown RBP10.48□□□□□ -0.73
SNHG1-201ENST00000535076 FBLN2P98095 1184 aa10.45□□□□□ -0.74
SNHG1-201ENST00000535076 AKT1S1Q96B36 256 aa10.36□□□□□ -0.75
SNHG1-201ENST00000535076 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
SNHG1-201ENST00000535076 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
SNHG1-201ENST00000535076 SPDYE2Q495Y8 402 aa10.32□□□□□ -0.76
SNHG1-201ENST00000535076 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
SNHG1-201ENST00000535076 SSUH2Q9Y2M2 353 aa10.29□□□□□ -0.76
SNHG1-201ENST00000535076 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
SNHG1-201ENST00000535076 ZNF692Q9BU19 519 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-201ENST00000535076 PITPNM1O00562 1244 aa10.23□□□□□ -0.77
SNHG1-201ENST00000535076 POTEHQ6S545 545 aa10.22□□□□□ -0.77
SNHG1-201ENST00000535076 PABPN1Q86U42 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNHG1-201ENST00000535076 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
SNHG1-201ENST00000535076 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
SNHG1-201ENST00000535076 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-201ENST00000535076 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNHG1-201ENST00000535076 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
SNHG1-201ENST00000535076 PROM2Q8N271 834 aa9.98□□□□□ -0.81
SNHG1-201ENST00000535076 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
SNHG1-201ENST00000535076 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
SNHG1-201ENST00000535076 FKBP8Q14318 412 aa9.91□□□□□ -0.82
SNHG1-201ENST00000535076 PRR29P0C7W0 189 aa9.9□□□□□ -0.82
SNHG1-201ENST00000535076 EVX2Q03828 476 aa9.83□□□□□ -0.84
SNHG1-201ENST00000535076 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
SNHG1-201ENST00000535076 STAG3Q9UJ98 1225 aa9.8□□□□□ -0.84
SNHG1-201ENST00000535076 HAX1O00165 279 aa9.77□□□□□ -0.85
SNHG1-201ENST00000535076 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-201ENST00000535076 MYT1Q01538 1121 aa9.75□□□□□ -0.85
SNHG1-201ENST00000535076 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
SNHG1-201ENST00000535076 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-201ENST00000535076 SP7Q8TDD2 431 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-201ENST00000535076 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
SNHG1-201ENST00000535076 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
SNHG1-201ENST00000535076 MIER1Q8N108 512 aa9.58□□□□□ -0.88
SNHG1-201ENST00000535076 TTBK1Q5TCY1 1321 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-201ENST00000535076 GABBR2O75899 941 aa9.52□□□□□ -0.89
SNHG1-201ENST00000535076 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
SNHG1-201ENST00000535076 NPM1P06748 294 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNHG1-201ENST00000535076 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
SNHG1-201ENST00000535076 VASPP50552 380 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-201ENST00000535076 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
SNHG1-201ENST00000535076 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
SNHG1-201ENST00000535076 ZNF579Q8NAF0 562 aaKnown RBP9.49□□□□□ -0.89
SNHG1-201ENST00000535076 PHF12Q96QT6 1004 aa9.49□□□□□ -0.89
SNHG1-201ENST00000535076 NUBP1P53384 320 aa9.46□□□□□ -0.9
SNHG1-201ENST00000535076 TSPYL2Q9H2G4 693 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-201ENST00000535076 GALR2O43603 387 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-201ENST00000535076 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms