RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
SNHG1-202ENST00000535689 CHIC1Q5VXU3 224 aa14.82□□□□□ -0.04
SNHG1-202ENST00000535689 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
SNHG1-202ENST00000535689 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
SNHG1-202ENST00000535689 FOXD1Q16676 465 aa12.17□□□□□ -0.46
SNHG1-202ENST00000535689 PLPPR3Q6T4P5 718 aa11.91□□□□□ -0.5
SNHG1-202ENST00000535689 PPP6R1Q9UPN7 881 aa11.63□□□□□ -0.55
SNHG1-202ENST00000535689 ADRA2BP18089 450 aa11.6□□□□□ -0.55
SNHG1-202ENST00000535689 PIAS4Q8N2W9 510 aaPredicted RBP11.42□□□□□ -0.58
SNHG1-202ENST00000535689 MSH5O43196 834 aa11.24□□□□□ -0.61
SNHG1-202ENST00000535689 POTEDQ86YR6 584 aa11.03□□□□□ -0.64
SNHG1-202ENST00000535689 MAPK8IP2Q13387 824 aaPredicted RBP10.61□□□□□ -0.71
SNHG1-202ENST00000535689 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
SNHG1-202ENST00000535689 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
SNHG1-202ENST00000535689 NCBP3Q53F19 620 aaKnown RBP10.43□□□□□ -0.74
SNHG1-202ENST00000535689 DMRT2Q9Y5R5 561 aa10.36□□□□□ -0.75
SNHG1-202ENST00000535689 KCNA4P22459 653 aa10.3□□□□□ -0.76
SNHG1-202ENST00000535689 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.77
SNHG1-202ENST00000535689 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
SNHG1-202ENST00000535689 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-202ENST00000535689 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-202ENST00000535689 DCAF8L1A6NGE4 600 aa10□□□□□ -0.81
SNHG1-202ENST00000535689 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
SNHG1-202ENST00000535689 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
SNHG1-202ENST00000535689 DNAJC5BQ9UF47 199 aa9.83□□□□□ -0.84
SNHG1-202ENST00000535689 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-202ENST00000535689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.62□□□□□ -0.87
SNHG1-202ENST00000535689 RNF39Q9H2S5 420 aa9.61□□□□□ -0.87
SNHG1-202ENST00000535689 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
SNHG1-202ENST00000535689 FOXD4L1Q9NU39 408 aa9.59□□□□□ -0.87
SNHG1-202ENST00000535689 SLC4A2P04920 1241 aa9.58□□□□□ -0.88
SNHG1-202ENST00000535689 U3KPZ7 1027 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-202ENST00000535689 C1QBPQ07021 282 aaKnown RBP9.44□□□□□ -0.9
SNHG1-202ENST00000535689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-202ENST00000535689 MYCNP04198 464 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-202ENST00000535689 HNRNPUL2Q1KMD3 747 aaKnown RBP9.39□□□□□ -0.91
SNHG1-202ENST00000535689 ZBTB22O15209 634 aa9.37□□□□□ -0.91
SNHG1-202ENST00000535689 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
SNHG1-202ENST00000535689 SPINK5Q9NQ38 1064 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-202ENST00000535689 APLP2Q06481 763 aa9.31□□□□□ -0.92
SNHG1-202ENST00000535689 SAMD1Q6SPF0 538 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-202ENST00000535689 CAPN15O75808 1086 aa9.24□□□□□ -0.93
SNHG1-202ENST00000535689 TRHP20396 242 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-202ENST00000535689 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-202ENST00000535689 DSG3P32926 999 aa9.12□□□□□ -0.95
SNHG1-202ENST00000535689 ABCB7O75027 752 aa9.11□□□□□ -0.95
SNHG1-202ENST00000535689 ZNF219Q9P2Y4 722 aaPredicted RBP9.06□□□□□ -0.96
SNHG1-202ENST00000535689 POLA2Q14181 598 aa8.95□□□□□ -0.98
SNHG1-202ENST00000535689 FBLN2P98095 1184 aa8.82□□□□□ -1
SNHG1-202ENST00000535689 ZBTB12Q9Y330 459 aaPredicted RBP8.82□□□□□ -1
SNHG1-202ENST00000535689 FKBP8Q14318 412 aa8.76□□□□□ -1.01
SNHG1-202ENST00000535689 MKRN4PQ13434 485 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-202ENST00000535689 OSCARQ8IYS5 282 aa8.71□□□□□ -1.02
SNHG1-202ENST00000535689 POTEHQ6S545 545 aa8.65□□□□□ -1.02
SNHG1-202ENST00000535689 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
SNHG1-202ENST00000535689 SPDYE4A6NLX3 237 aa8.6□□□□□ -1.03
SNHG1-202ENST00000535689 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
SNHG1-202ENST00000535689 AMER1Q5JTC6 1135 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-202ENST00000535689 SPDYE2BA6NHP3 402 aa8.5□□□□□ -1.05
SNHG1-202ENST00000535689 SPDYE6P0CI01 402 aa8.5□□□□□ -1.05
SNHG1-202ENST00000535689 SPDYE2Q495Y8 402 aa8.5□□□□□ -1.05
SNHG1-202ENST00000535689 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
SNHG1-202ENST00000535689 REM2Q8IYK8 340 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-202ENST00000535689 ZNF692Q9BU19 519 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-202ENST00000535689 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
SNHG1-202ENST00000535689 STAG3Q9UJ98 1225 aa8.42□□□□□ -1.06
SNHG1-202ENST00000535689 PROM2Q8N271 834 aa8.41□□□□□ -1.06
SNHG1-202ENST00000535689 PITPNM1O00562 1244 aa8.39□□□□□ -1.07
SNHG1-202ENST00000535689 CHRDL2Q6WN34 429 aa8.38□□□□□ -1.07
SNHG1-202ENST00000535689 PABPN1Q86U42 306 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNHG1-202ENST00000535689 PLEKHG5O94827 1062 aa8.37□□□□□ -1.07
SNHG1-202ENST00000535689 CLEC11AQ9Y240 323 aa8.34□□□□□ -1.07
SNHG1-202ENST00000535689 VASPP50552 380 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-202ENST00000535689 ZBTB47Q9UFB7 747 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-202ENST00000535689 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
SNHG1-202ENST00000535689 SPDYE1Q8NFV5 336 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-202ENST00000535689 PLCD3Q8N3E9 789 aa8.24□□□□□ -1.09
SNHG1-202ENST00000535689 FXR2P51116 673 aaKnown RBP eCLIP8.22□□□□□ -1.09
SNHG1-202ENST00000535689 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
SNHG1-202ENST00000535689 RTN4Q9NQC3 1192 aaKnown RBP8.22□□□□□ -1.09
SNHG1-202ENST00000535689 CHADLQ6NUI6 762 aa8.2□□□□□ -1.1
SNHG1-202ENST00000535689 PRR29P0C7W0 189 aa8.18□□□□□ -1.1
SNHG1-202ENST00000535689 MIER1Q8N108 512 aa8.18□□□□□ -1.1
SNHG1-202ENST00000535689 PRKAR2AP13861 404 aaKnown RBP8.16□□□□□ -1.1
SNHG1-202ENST00000535689 SPOCK2Q92563 424 aa8.15□□□□□ -1.1
SNHG1-202ENST00000535689 IFNLR1Q8IU57 520 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-202ENST00000535689 SP7Q8TDD2 431 aaPredicted RBP8.09□□□□□ -1.11
SNHG1-202ENST00000535689 CREBZFQ9NS37 354 aa8.08□□□□□ -1.12
SNHG1-202ENST00000535689 TRIM41Q8WV44 630 aa8.07□□□□□ -1.12
SNHG1-202ENST00000535689 HAX1O00165 279 aa8.05□□□□□ -1.12
SNHG1-202ENST00000535689 EVX2Q03828 476 aa8.04□□□□□ -1.12
SNHG1-202ENST00000535689 NPM1P06748 294 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNHG1-202ENST00000535689 GSE1Q14687 1217 aa8.02□□□□□ -1.13
SNHG1-202ENST00000535689 TAOK2Q9UL54 1235 aa8.01□□□□□ -1.13
SNHG1-202ENST00000535689 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-202ENST00000535689 DCAF8L2P0C7V8 631 aa7.97□□□□□ -1.13
SNHG1-202ENST00000535689 MNX1P50219 401 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-202ENST00000535689 ECM2O94769 699 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-202ENST00000535689 CIZ1Q9ULV3 898 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-202ENST00000535689 C19orf67A6NJJ6 358 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms