RNA–Protein interactions for RNA: ENST00000530026.5

EIF3M-207, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 2

Gene EIF3M, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-207ENST00000530026 AEBP2Q6ZN18 517 aaPredicted RBP32.13■■■□□ 2.73
EIF3M-207ENST00000530026 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
EIF3M-207ENST00000530026 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
EIF3M-207ENST00000530026 PHF23Q9BUL5 403 aaPredicted RBP27.08■■□□□ 1.93
EIF3M-207ENST00000530026 FOXD1Q16676 465 aa25.46■■□□□ 1.67
EIF3M-207ENST00000530026 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
EIF3M-207ENST00000530026 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
EIF3M-207ENST00000530026 ADRA2BP18089 450 aa24.01■■□□□ 1.43
EIF3M-207ENST00000530026 PIAS4Q8N2W9 510 aaPredicted RBP23.88■■□□□ 1.41
EIF3M-207ENST00000530026 MSH5O43196 834 aa23.72■■□□□ 1.39
EIF3M-207ENST00000530026 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
EIF3M-207ENST00000530026 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
EIF3M-207ENST00000530026 MAPK8IP2Q13387 824 aaPredicted RBP21.93■■□□□ 1.1
EIF3M-207ENST00000530026 PPP4R3CPQ6ZMV5 832 aa21.82■■□□□ 1.08
EIF3M-207ENST00000530026 DMRT2Q9Y5R5 561 aa21.77■■□□□ 1.08
EIF3M-207ENST00000530026 CNKSR2Q8WXI2 1034 aa21.34■■□□□ 1.01
EIF3M-207ENST00000530026 HOXD11P31277 338 aaPredicted RBP21.12■□□□□ 0.97
EIF3M-207ENST00000530026 NCBP3Q53F19 620 aaKnown RBP21.11■□□□□ 0.97
EIF3M-207ENST00000530026 RNF216Q9NWF9 866 aaPredicted RBP21.05■□□□□ 0.96
EIF3M-207ENST00000530026 DCAF8L1A6NGE4 600 aa20.82■□□□□ 0.92
EIF3M-207ENST00000530026 NPM3O75607 178 aaKnown RBP20.77■□□□□ 0.92
EIF3M-207ENST00000530026 KCNA4P22459 653 aa20.69■□□□□ 0.9
EIF3M-207ENST00000530026 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
EIF3M-207ENST00000530026 RNF39Q9H2S5 420 aa20.27■□□□□ 0.84
EIF3M-207ENST00000530026 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
EIF3M-207ENST00000530026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.818e-8■□□□□ 10.9
EIF3M-207ENST00000530026 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
EIF3M-207ENST00000530026 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
EIF3M-207ENST00000530026 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
EIF3M-207ENST00000530026 SLC4A1APQ9BWU0 796 aaKnown RBP19.62■□□□□ 0.73
EIF3M-207ENST00000530026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.68
EIF3M-207ENST00000530026 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
EIF3M-207ENST00000530026 SPINK5Q9NQ38 1064 aaPredicted RBP19.31■□□□□ 0.68
EIF3M-207ENST00000530026 CAPN15O75808 1086 aa19.27■□□□□ 0.68
EIF3M-207ENST00000530026 APLP2Q06481 763 aa19.26■□□□□ 0.67
EIF3M-207ENST00000530026 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
EIF3M-207ENST00000530026 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
EIF3M-207ENST00000530026 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
EIF3M-207ENST00000530026 DSG3P32926 999 aa19.09■□□□□ 0.65
EIF3M-207ENST00000530026 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
EIF3M-207ENST00000530026 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
EIF3M-207ENST00000530026 ZBTB22O15209 634 aa19.02■□□□□ 0.64
EIF3M-207ENST00000530026 ABCB7O75027 752 aa18.84■□□□□ 0.61
EIF3M-207ENST00000530026 ATF5Q9Y2D1 282 aaPredicted RBP18.71■□□□□ 0.59
EIF3M-207ENST00000530026 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
EIF3M-207ENST00000530026 POLA2Q14181 598 aa18.62■□□□□ 0.57
EIF3M-207ENST00000530026 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
EIF3M-207ENST00000530026 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
EIF3M-207ENST00000530026 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
EIF3M-207ENST00000530026 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
EIF3M-207ENST00000530026 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
EIF3M-207ENST00000530026 FBLN2P98095 1184 aa18■□□□□ 0.47
EIF3M-207ENST00000530026 MKRN4PQ13434 485 aaPredicted RBP17.89■□□□□ 0.45
EIF3M-207ENST00000530026 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
EIF3M-207ENST00000530026 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
EIF3M-207ENST00000530026 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
EIF3M-207ENST00000530026 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
EIF3M-207ENST00000530026 POTEHQ6S545 545 aa17.71■□□□□ 0.43
EIF3M-207ENST00000530026 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
EIF3M-207ENST00000530026 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
EIF3M-207ENST00000530026 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
EIF3M-207ENST00000530026 SSUH2Q9Y2M2 353 aa17.57■□□□□ 0.4
EIF3M-207ENST00000530026 PITPNM1O00562 1244 aa17.49■□□□□ 0.39
EIF3M-207ENST00000530026 SPDYE1Q8NFV5 336 aaPredicted RBP17.37■□□□□ 0.37
EIF3M-207ENST00000530026 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
EIF3M-207ENST00000530026 PIP4P2Q8N4L2 257 aa17.31■□□□□ 0.36
EIF3M-207ENST00000530026 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
EIF3M-207ENST00000530026 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.362e-13■□□□□ 8.3
EIF3M-207ENST00000530026 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
EIF3M-207ENST00000530026 PRR29P0C7W0 189 aa17.07■□□□□ 0.32
EIF3M-207ENST00000530026 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
EIF3M-207ENST00000530026 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
EIF3M-207ENST00000530026 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
EIF3M-207ENST00000530026 HAX1O00165 279 aa16.9■□□□□ 0.3
EIF3M-207ENST00000530026 PROM2Q8N271 834 aa16.9■□□□□ 0.3
EIF3M-207ENST00000530026 SP7Q8TDD2 431 aaPredicted RBP16.78■□□□□ 0.28
EIF3M-207ENST00000530026 FKBP8Q14318 412 aa16.73■□□□□ 0.27
EIF3M-207ENST00000530026 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
EIF3M-207ENST00000530026 C19orf67A6NJJ6 358 aa16.72■□□□□ 0.27
EIF3M-207ENST00000530026 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
EIF3M-207ENST00000530026 EVX2Q03828 476 aa16.7■□□□□ 0.26
EIF3M-207ENST00000530026 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
EIF3M-207ENST00000530026 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
EIF3M-207ENST00000530026 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
EIF3M-207ENST00000530026 MIER1Q8N108 512 aa16.4■□□□□ 0.22
EIF3M-207ENST00000530026 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
EIF3M-207ENST00000530026 GABBR2O75899 941 aa16.37■□□□□ 0.21
EIF3M-207ENST00000530026 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
EIF3M-207ENST00000530026 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
EIF3M-207ENST00000530026 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
EIF3M-207ENST00000530026 PLCD3Q8N3E9 789 aa16.32■□□□□ 0.2
EIF3M-207ENST00000530026 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
EIF3M-207ENST00000530026 CLCN6P51797 869 aa16.3■□□□□ 0.2
EIF3M-207ENST00000530026 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
EIF3M-207ENST00000530026 PHF12Q96QT6 1004 aa16.14■□□□□ 0.17
EIF3M-207ENST00000530026 TSPYL2Q9H2G4 693 aaPredicted RBP16.13■□□□□ 0.17
EIF3M-207ENST00000530026 VASPP50552 380 aaPredicted RBP16.1■□□□□ 0.17
EIF3M-207ENST00000530026 RASEFQ8IZ41 740 aa16.1■□□□□ 0.17
EIF3M-207ENST00000530026 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
EIF3M-207ENST00000530026 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms