RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
HIPK1-206ENST00000369559 HRCP23327 699 aa16.99■□□□□ 0.31
HIPK1-206ENST00000369559 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.29
HIPK1-206ENST00000369559 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
HIPK1-206ENST00000369559 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
HIPK1-206ENST00000369559 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.26
HIPK1-206ENST00000369559 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
HIPK1-206ENST00000369559 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
HIPK1-206ENST00000369559 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
HIPK1-206ENST00000369559 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
HIPK1-206ENST00000369559 ZCCHC6Q5VYS8 1495 aaKnown RBP16.37■□□□□ 0.21
HIPK1-206ENST00000369559 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
HIPK1-206ENST00000369559 ABCC9O60706 1549 aa16.27■□□□□ 0.19
HIPK1-206ENST00000369559 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
HIPK1-206ENST00000369559 LOC105371045A0A1W2PR82 267 aa16.09■□□□□ 0.17
HIPK1-206ENST00000369559 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
HIPK1-206ENST00000369559 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
HIPK1-206ENST00000369559 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
HIPK1-206ENST00000369559 MYT1Q01538 1121 aa15.74■□□□□ 0.11
HIPK1-206ENST00000369559 NACADO15069 1562 aa15.69■□□□□ 0.1
HIPK1-206ENST00000369559 ACIN1Q9UKV3 1341 aaKnown RBP15.66■□□□□ 0.1
HIPK1-206ENST00000369559 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
HIPK1-206ENST00000369559 NEUROD1Q13562 356 aa15.59■□□□□ 0.09
HIPK1-206ENST00000369559 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
HIPK1-206ENST00000369559 GTF3C3Q9Y5Q9 886 aa15.5■□□□□ 0.07
HIPK1-206ENST00000369559 CENPBP07199 599 aaPredicted RBP15.49■□□□□ 0.07
HIPK1-206ENST00000369559 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
HIPK1-206ENST00000369559 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
HIPK1-206ENST00000369559 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
HIPK1-206ENST00000369559 DIEXFQ68CQ4 756 aaKnown RBP15.42■□□□□ 0.06
HIPK1-206ENST00000369559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
HIPK1-206ENST00000369559 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
HIPK1-206ENST00000369559 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
HIPK1-206ENST00000369559 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.05
HIPK1-206ENST00000369559 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
HIPK1-206ENST00000369559 BICRAQ9NZM4 1560 aa15.18■□□□□ 0.02
HIPK1-206ENST00000369559 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
HIPK1-206ENST00000369559 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
HIPK1-206ENST00000369559 YTHDC1Q96MU7 727 aaKnown RBP15.1■□□□□ 0.01
HIPK1-206ENST00000369559 MIER1Q8N108 512 aa15□□□□□ -0.01
HIPK1-206ENST00000369559 TTBK1Q5TCY1 1321 aaPredicted RBP15□□□□□ -0.01
HIPK1-206ENST00000369559 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
HIPK1-206ENST00000369559 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
HIPK1-206ENST00000369559 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
HIPK1-206ENST00000369559 CEP162Q5TB80 1403 aa14.97□□□□□ -0.01
HIPK1-206ENST00000369559 WIZO95785 1651 aa14.95□□□□□ -0.02
HIPK1-206ENST00000369559 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
HIPK1-206ENST00000369559 BAZ1AQ9NRL2 1556 aaPredicted RBP14.89□□□□□ -0.03
HIPK1-206ENST00000369559 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
HIPK1-206ENST00000369559 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
HIPK1-206ENST00000369559 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
HIPK1-206ENST00000369559 SUPT16HQ9Y5B9 1047 aaKnown RBP14.79□□□□□ -0.04
HIPK1-206ENST00000369559 SOGA1O94964 1423 aa14.78□□□□□ -0.04
HIPK1-206ENST00000369559 EEA1Q15075 1411 aa14.77□□□□□ -0.04
HIPK1-206ENST00000369559 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
HIPK1-206ENST00000369559 UBTFP17480 764 aaKnown RBP14.75□□□□□ -0.05
HIPK1-206ENST00000369559 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
HIPK1-206ENST00000369559 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
HIPK1-206ENST00000369559 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
HIPK1-206ENST00000369559 GOLGA3Q08378 1498 aa14.72□□□□□ -0.05
HIPK1-206ENST00000369559 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
HIPK1-206ENST00000369559 TOP2AP11388 1531 aaKnown RBP14.69□□□□□ -0.06
HIPK1-206ENST00000369559 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
HIPK1-206ENST00000369559 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
HIPK1-206ENST00000369559 BCL11AQ9H165 835 aa14.64□□□□□ -0.07
HIPK1-206ENST00000369559 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
HIPK1-206ENST00000369559 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
HIPK1-206ENST00000369559 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
HIPK1-206ENST00000369559 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
HIPK1-206ENST00000369559 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
HIPK1-206ENST00000369559 CLIP1P30622 1438 aa14.57□□□□□ -0.08
HIPK1-206ENST00000369559 KIF21BO75037 1637 aa14.56□□□□□ -0.08
HIPK1-206ENST00000369559 APLP2Q06481 763 aa14.54□□□□□ -0.08
HIPK1-206ENST00000369559 DHX57Q6P158 1386 aaKnown RBP14.54□□□□□ -0.08
HIPK1-206ENST00000369559 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.09
HIPK1-206ENST00000369559 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.09
HIPK1-206ENST00000369559 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
HIPK1-206ENST00000369559 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
HIPK1-206ENST00000369559 BCANQ96GW7 911 aa14.42□□□□□ -0.1
HIPK1-206ENST00000369559 SYNJ1O43426 1573 aa14.4□□□□□ -0.1
HIPK1-206ENST00000369559 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
HIPK1-206ENST00000369559 FKBP8Q14318 412 aa14.39□□□□□ -0.11
HIPK1-206ENST00000369559 KCNH8Q96L42 1107 aa14.39□□□□□ -0.11
HIPK1-206ENST00000369559 RBM19Q9Y4C8 960 aaKnown RBP14.37□□□□□ -0.11
HIPK1-206ENST00000369559 CUX2O14529 1486 aa14.34□□□□□ -0.11
HIPK1-206ENST00000369559 RANGAP1P46060 587 aaPredicted RBP14.32□□□□□ -0.12
HIPK1-206ENST00000369559 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
HIPK1-206ENST00000369559 NEFLP07196 543 aa14.31□□□□□ -0.12
HIPK1-206ENST00000369559 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
HIPK1-206ENST00000369559 ARAP1Q96P48 1450 aa14.27□□□□□ -0.12
HIPK1-206ENST00000369559 CCNB3Q8WWL7 1395 aa14.23□□□□□ -0.13
HIPK1-206ENST00000369559 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
HIPK1-206ENST00000369559 ERICH3Q5RHP9 1530 aa14.23□□□□□ -0.13
HIPK1-206ENST00000369559 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
HIPK1-206ENST00000369559 MSH5O43196 834 aa14.22□□□□□ -0.13
HIPK1-206ENST00000369559 ITGAEP38570 1179 aa14.21□□□□□ -0.13
HIPK1-206ENST00000369559 RAB3GAP2Q9H2M9 1393 aa14.18□□□□□ -0.14
HIPK1-206ENST00000369559 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
HIPK1-206ENST00000369559 PPP1R15AO75807 674 aaPredicted RBP14.18□□□□□ -0.14
HIPK1-206ENST00000369559 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms