RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
HIPK1-205ENST00000369558 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
HIPK1-205ENST00000369558 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
HIPK1-205ENST00000369558 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
HIPK1-205ENST00000369558 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
HIPK1-205ENST00000369558 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.08
HIPK1-205ENST00000369558 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
HIPK1-205ENST00000369558 PCGF6Q9BYE7 350 aa21.76■■□□□ 1.07
HIPK1-205ENST00000369558 APLP2Q06481 763 aa21.55■■□□□ 1.04
HIPK1-205ENST00000369558 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
HIPK1-205ENST00000369558 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
HIPK1-205ENST00000369558 CCER1Q8TC90 406 aaPredicted RBP21.17■□□□□ 0.98
HIPK1-205ENST00000369558 TRIM41Q8WV44 630 aa21.14■□□□□ 0.98
HIPK1-205ENST00000369558 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
HIPK1-205ENST00000369558 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
HIPK1-205ENST00000369558 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
HIPK1-205ENST00000369558 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
HIPK1-205ENST00000369558 UBTFP17480 764 aaKnown RBP20.94■□□□□ 0.94
HIPK1-205ENST00000369558 ZEB1P37275 1124 aaPredicted RBP20.89■□□□□ 0.93
HIPK1-205ENST00000369558 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
HIPK1-205ENST00000369558 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
HIPK1-205ENST00000369558 TRIM26Q12899 539 aaPredicted RBP20.54■□□□□ 0.88
HIPK1-205ENST00000369558 NEFLP07196 543 aa20.52■□□□□ 0.88
HIPK1-205ENST00000369558 ITGAEP38570 1179 aa20.48■□□□□ 0.87
HIPK1-205ENST00000369558 HRCP23327 699 aa20.45■□□□□ 0.86
HIPK1-205ENST00000369558 CNGB1Q14028 1251 aaPredicted RBP20.31■□□□□ 0.84
HIPK1-205ENST00000369558 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
HIPK1-205ENST00000369558 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
HIPK1-205ENST00000369558 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
HIPK1-205ENST00000369558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
HIPK1-205ENST00000369558 MYT1Q01538 1121 aa20.06■□□□□ 0.8
HIPK1-205ENST00000369558 MYT1LQ9UL68 1186 aa20.03■□□□□ 0.8
HIPK1-205ENST00000369558 DIEXFQ68CQ4 756 aaKnown RBP19.99■□□□□ 0.79
HIPK1-205ENST00000369558 DAXXQ9UER7 740 aaPredicted RBP19.92■□□□□ 0.78
HIPK1-205ENST00000369558 FAM50AQ14320 339 aaKnown RBP19.8■□□□□ 0.76
HIPK1-205ENST00000369558 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
HIPK1-205ENST00000369558 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
HIPK1-205ENST00000369558 BCANQ96GW7 911 aa19.74■□□□□ 0.75
HIPK1-205ENST00000369558 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
HIPK1-205ENST00000369558 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
HIPK1-205ENST00000369558 ABCC9O60706 1549 aa19.64■□□□□ 0.73
HIPK1-205ENST00000369558 TRIM52Q96A61 297 aa19.61■□□□□ 0.73
HIPK1-205ENST00000369558 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
HIPK1-205ENST00000369558 ZNF326Q5BKZ1 582 aaKnown RBP19.54■□□□□ 0.72
HIPK1-205ENST00000369558 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
HIPK1-205ENST00000369558 RTL5Q5HYW3 569 aaPredicted RBP19.5■□□□□ 0.71
HIPK1-205ENST00000369558 ARID3CA6NKF2 412 aa19.4■□□□□ 0.7
HIPK1-205ENST00000369558 ANP32CO43423 234 aa19.4■□□□□ 0.7
HIPK1-205ENST00000369558 P3H3Q8IVL6 736 aa19.39■□□□□ 0.69
HIPK1-205ENST00000369558 BCL11AQ9H165 835 aa19.36■□□□□ 0.69
HIPK1-205ENST00000369558 FBLN2P98095 1184 aa19.32■□□□□ 0.68
HIPK1-205ENST00000369558 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
HIPK1-205ENST00000369558 ACIN1Q9UKV3 1341 aaKnown RBP19.26■□□□□ 0.67
HIPK1-205ENST00000369558 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
HIPK1-205ENST00000369558 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
HIPK1-205ENST00000369558 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
HIPK1-205ENST00000369558 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
HIPK1-205ENST00000369558 CANXP27824 592 aaKnown RBP19.09■□□□□ 0.65
HIPK1-205ENST00000369558 NPM2Q86SE8 214 aaKnown RBP19.08■□□□□ 0.64
HIPK1-205ENST00000369558 FKBP8Q14318 412 aa19.05■□□□□ 0.64
HIPK1-205ENST00000369558 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
HIPK1-205ENST00000369558 ZBTB47Q9UFB7 747 aaPredicted RBP18.99■□□□□ 0.63
HIPK1-205ENST00000369558 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
HIPK1-205ENST00000369558 HNRNPUQ00839 825 aaKnown RBP eCLIP18.94■□□□□ 0.62
HIPK1-205ENST00000369558 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
HIPK1-205ENST00000369558 ANP32AP39687 249 aaKnown RBP18.94■□□□□ 0.62
HIPK1-205ENST00000369558 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
HIPK1-205ENST00000369558 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
HIPK1-205ENST00000369558 TONSLQ96HA7 1378 aa18.89■□□□□ 0.61
HIPK1-205ENST00000369558 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
HIPK1-205ENST00000369558 CHIC2Q9UKJ5 165 aa18.86■□□□□ 0.61
HIPK1-205ENST00000369558 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
HIPK1-205ENST00000369558 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
HIPK1-205ENST00000369558 NEFMP07197 916 aa18.8■□□□□ 0.6
HIPK1-205ENST00000369558 MIER1Q8N108 512 aa18.8■□□□□ 0.6
HIPK1-205ENST00000369558 NBR1Q14596 966 aa18.78■□□□□ 0.6
HIPK1-205ENST00000369558 CHGAP10645 457 aaKnown RBP18.77■□□□□ 0.6
HIPK1-205ENST00000369558 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.59
HIPK1-205ENST00000369558 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
HIPK1-205ENST00000369558 EIF5BO60841 1220 aaKnown RBP18.73■□□□□ 0.59
HIPK1-205ENST00000369558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
HIPK1-205ENST00000369558 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
HIPK1-205ENST00000369558 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
HIPK1-205ENST00000369558 ARXQ96QS3 562 aa18.7■□□□□ 0.58
HIPK1-205ENST00000369558 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
HIPK1-205ENST00000369558 HSP90AA1P07900 732 aaKnown RBP18.68■□□□□ 0.58
HIPK1-205ENST00000369558 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
HIPK1-205ENST00000369558 CCDC136Q96JN2 1154 aa18.66■□□□□ 0.58
HIPK1-205ENST00000369558 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
HIPK1-205ENST00000369558 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
HIPK1-205ENST00000369558 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
HIPK1-205ENST00000369558 CLIP1P30622 1438 aa18.55■□□□□ 0.56
HIPK1-205ENST00000369558 UPF2Q9HAU5 1272 aaKnown RBP18.54■□□□□ 0.56
HIPK1-205ENST00000369558 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
HIPK1-205ENST00000369558 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.56
HIPK1-205ENST00000369558 ESF1Q9H501 851 aaKnown RBP18.51■□□□□ 0.55
HIPK1-205ENST00000369558 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
HIPK1-205ENST00000369558 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
HIPK1-205ENST00000369558 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
HIPK1-205ENST00000369558 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms