Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PROC-208ENST00000442644 600 ntTSL 319.12■□□□□ 0.652e-10■■■□□ 14.8
RPS3P23396 MTHFD2-204ENST00000462026 599 ntTSL 511.39□□□□□ -0.593e-6■■■□□ 14.8
RPS3P23396 MTHFD2-206ENST00000477455 696 ntTSL 37.84□□□□□ -1.155e-8■■■□□ 14.8
RPS3P23396 FGL1-210ENST00000522636 773 ntTSL 23.06□□□□□ -1.926e-7■■■□□ 14.8
RPS3P23396 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.34■□□□□ 0.051e-8■■■□□ 14.8
RPS3P23396 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC11.76□□□□□ -0.531e-8■■■□□ 14.8
RPS3P23396 DNAJC10-206ENST00000491074 3962 ntTSL 1 (best)10.61□□□□□ -0.711e-8■■■□□ 14.8
RPS3P23396 PSMD3-203ENST00000485835 2888 ntTSL 210.49□□□□□ -0.736e-8■■■□□ 14.8
RPS3P23396 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.811e-8■■■□□ 14.8
RPS3P23396 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.936e-11■■■□□ 14.8
RPS3P23396 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.796e-11■■■□□ 14.8
RPS3P23396 GRINA-209ENST00000533377 627 ntTSL 214.94□□□□□ -0.026e-11■■■□□ 14.8
RPS3P23396 GRINA-204ENST00000527194 806 ntTSL 214.44□□□□□ -0.16e-11■■■□□ 14.8
RPS3P23396 IFI30-202ENST00000597802 411 ntTSL 310.19□□□□□ -0.788e-17■■■□□ 14.8
RPS3P23396 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -12e-8■■■□□ 14.8
RPS3P23396 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.09□□□□□ -1.112e-8■■■□□ 14.8
RPS3P23396 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.94□□□□□ -1.32e-8■■■□□ 14.8
RPS3P23396 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.422e-8■■■□□ 14.8
RPS3P23396 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC12.24□□□□□ -0.457e-8■■■□□ 14.8
RPS3P23396 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.421e-8■■■□□ 14.8
RPS3P23396 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.16■□□□□ 0.345e-60■■■□□ 14.8
RPS3P23396 SERPINA5-211ENST00000556730 1463 ntTSL 210.54□□□□□ -0.722e-9■■■□□ 14.8
RPS3P23396 SERPINA5-207ENST00000554760 1113 ntTSL 29.92□□□□□ -0.822e-9■■■□□ 14.8
RPS3P23396 CCT3-215ENST00000496684 748 ntTSL 26.92□□□□□ -1.38e-7■■■□□ 14.8
RPS3P23396 CCT3-216ENST00000533194 581 ntTSL 36.81□□□□□ -1.328e-7■■■□□ 14.8
RPS3P23396 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.026e-8■■■□□ 14.8
RPS3P23396 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.066e-8■■■□□ 14.8
RPS3P23396 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.74■□□□□ 0.113e-7■■■□□ 14.8
RPS3P23396 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.58□□□□□ -0.083e-7■■■□□ 14.8
RPS3P23396 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.613e-7■■■□□ 14.8
RPS3P23396 WARS-201ENST00000344102 2690 ntTSL 5 BASIC10.09□□□□□ -0.793e-7■■■□□ 14.8
RPS3P23396 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.843e-7■■■□□ 14.8
RPS3P23396 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.073e-7■■■□□ 14.8
RPS3P23396 EML2-229ENST00000592853 539 ntTSL 513.94□□□□□ -0.182e-7■■■□□ 14.8
RPS3P23396 RPL30-203ENST00000517489 631 ntTSL 215.23■□□□□ 0.031e-22■■■□□ 14.8
RPS3P23396 CD81-204ENST00000468153 940 ntTSL 217.6■□□□□ 0.415e-8■■■□□ 14.8
RPS3P23396 CD81-216ENST00000531840 5235 ntTSL 1 (best)16.62■□□□□ 0.255e-8■■■□□ 14.8
RPS3P23396 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.25■□□□□ 0.035e-8■■■□□ 14.8
RPS3P23396 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.394e-7■■■□□ 14.8
RPS3P23396 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.87□□□□□ -0.034e-7■■■□□ 14.8
RPS3P23396 SEC24D-208ENST00000506622 1319 ntTSL 213.9□□□□□ -0.184e-7■■■□□ 14.8
RPS3P23396 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.784e-7■■■□□ 14.8
RPS3P23396 SEC24D-209ENST00000509818 1870 ntTSL 1 (best)9□□□□□ -0.974e-7■■■□□ 14.8
RPS3P23396 SEC24D-214ENST00000514561 3806 ntTSL 1 (best)4.49□□□□□ -1.694e-7■■■□□ 14.8
RPS3P23396 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.3□□□□□ -1.41e-6■■■□□ 14.8
RPS3P23396 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.37□□□□□ -0.274e-6■■■□□ 14.8
RPS3P23396 COA6-204ENST00000619305 697 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.764e-6■■■□□ 14.8
RPS3P23396 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.52□□□□□ -0.245e-8■■■□□ 14.8
RPS3P23396 PGM3-202ENST00000503094 558 ntTSL 413.4□□□□□ -0.262e-7■■■□□ 14.8
RPS3P23396 PGM3-208ENST00000508748 640 ntTSL 511.63□□□□□ -0.552e-7■■■□□ 14.8
RPS3P23396 PGM3-204ENST00000505470 561 ntTSL 411.25□□□□□ -0.612e-7■■■□□ 14.8
RPS3P23396 PGM3-210ENST00000510258 750 ntTSL 310.92□□□□□ -0.665e-8■■■□□ 14.8
RPS3P23396 PGM3-205ENST00000506587 1971 ntTSL 2 BASIC10.03□□□□□ -0.85e-8■■■□□ 14.8
RPS3P23396 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.225e-8■■■□□ 14.8
RPS3P23396 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.17□□□□□ -1.425e-8■■■□□ 14.8
RPS3P23396 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.36□□□□□ -1.555e-8■■■□□ 14.8
RPS3P23396 PGM3-207ENST00000507554 556 ntTSL 43.94□□□□□ -1.782e-7■■■□□ 14.8
RPS3P23396 ACSL3-207ENST00000474422 760 ntTSL 37.79□□□□□ -1.162e-12■■■□□ 14.8
RPS3P23396 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.432e-30■■■□□ 14.8
RPS3P23396 ACTB-207ENST00000462494 2245 ntTSL 516.62■□□□□ 0.252e-30■■■□□ 14.8
RPS3P23396 ACTB-204ENST00000425660 1845 ntTSL 1 (best)15.11■□□□□ 0.012e-30■■■□□ 14.8
RPS3P23396 ACTB-213ENST00000493945 1236 ntTSL 514.76□□□□□ -0.052e-30■■■□□ 14.8
RPS3P23396 SLC52A2-213ENST00000534725 935 ntTSL 219.25■□□□□ 0.678e-7■■■□□ 14.8
RPS3P23396 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC12.23□□□□□ -0.455e-8■■■□□ 14.8
RPS3P23396 MTHFD2-201ENST00000394053 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.765e-8■■■□□ 14.8
RPS3P23396 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC8.81□□□□□ -15e-8■■■□□ 14.8
RPS3P23396 MTHFD2-205ENST00000470592 1396 ntTSL 27.8□□□□□ -1.165e-8■■■□□ 14.8
RPS3P23396 MTHFD2-208ENST00000489041 1135 ntTSL 27.75□□□□□ -1.175e-8■■■□□ 14.8
RPS3P23396 KRT8-211ENST00000549176 770 ntTSL 210.91□□□□□ -0.665e-7■■■□□ 14.8
RPS3P23396 B2M-213ENST00000623550 2329 nt7.17□□□□□ -1.261e-9■■■□□ 14.8
RPS3P23396 GPC3-203ENST00000406757 836 ntTSL 28.2□□□□□ -1.12e-41■■■□□ 14.8
RPS3P23396 HNRNPL-209ENST00000600741 624 ntTSL 212.73□□□□□ -0.375e-9■■■□□ 14.7
RPS3P23396 CYP27A1-203ENST00000445971 903 ntTSL 516.93■□□□□ 0.34e-7■■■□□ 14.7
RPS3P23396 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)14.01□□□□□ -0.179e-7■■■□□ 14.7
RPS3P23396 CANX-218ENST00000514032 1876 ntTSL 220.61■□□□□ 0.894e-10■■■□□ 14.7
RPS3P23396 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.027e-9■■■□□ 14.7
RPS3P23396 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.277e-9■■■□□ 14.7
RPS3P23396 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.457e-9■■■□□ 14.7
RPS3P23396 FBXO2-204ENST00000471501 725 ntTSL 217.79■□□□□ 0.441e-9■■■□□ 14.7
RPS3P23396 FBXO2-203ENST00000466919 774 ntTSL 517.64■□□□□ 0.411e-9■■■□□ 14.7
RPS3P23396 SND1-214ENST00000489417 1447 ntTSL 220.71■□□□□ 0.916e-10■■■□□ 14.7
RPS3P23396 ACTN4-204ENST00000440400 3180 ntTSL 513.11□□□□□ -0.313e-10■■■□□ 14.7
RPS3P23396 CCND2-201ENST00000261254 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.742e-6■■■□□ 14.7
RPS3P23396 ETFA-209ENST00000559758 893 ntTSL 26.05□□□□□ -1.442e-7■■■□□ 14.7
RPS3P23396 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.16e-8■■■□□ 14.7
RPS3P23396 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.25□□□□□ -0.136e-8■■■□□ 14.7
RPS3P23396 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC13.17□□□□□ -0.36e-8■■■□□ 14.7
RPS3P23396 NDRG1-204ENST00000517599 2918 ntTSL 211.87□□□□□ -0.516e-8■■■□□ 14.7
RPS3P23396 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC11.8□□□□□ -0.526e-8■■■□□ 14.7
RPS3P23396 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC11□□□□□ -0.656e-8■■■□□ 14.7
RPS3P23396 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.686e-8■■■□□ 14.7
RPS3P23396 LSR-207ENST00000597933 873 ntTSL 515.18■□□□□ 0.027e-10■■■□□ 14.7
RPS3P23396 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.54e-7■■■□□ 14.7
RPS3P23396 EWSR1-205ENST00000360091 1289 ntTSL 518.93■□□□□ 0.621e-10■■■□□ 14.7
RPS3P23396 EWSR1-218ENST00000483629 1818 ntTSL 518.15■□□□□ 0.51e-10■■■□□ 14.7
RPS3P23396 MCM4-212ENST00000521151 1125 ntTSL 28.16□□□□□ -1.14e-9■■■□□ 14.7
RPS3P23396 EIF1B-204ENST00000488260 637 ntTSL 25.03□□□□□ -1.66e-22■■■□□ 14.7
RPS3P23396 EIF1B-202ENST00000462088 873 ntTSL 22.58□□□□□ -26e-22■■■□□ 14.7
RPS3P23396 TFRC-204ENST00000421258 524 ntTSL 311.94□□□□□ -0.52e-8■■■□□ 14.7
RPS3P23396 RACK1-231ENST00000514183 1439 ntTSL 26.52□□□□□ -1.373e-11■■■□□ 14.7
Retrieved 100 of 24,271 protein–RNA pairs in 269.4 ms