RNA–Protein interactions for RNA: ENST00000409601.1

MTHFD2-202, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 5 BASIC

Gene MTHFD2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-202ENST00000409601 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
MTHFD2-202ENST00000409601 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
MTHFD2-202ENST00000409601 ABCC9O60706 1549 aa24.45■■□□□ 1.5
MTHFD2-202ENST00000409601 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
MTHFD2-202ENST00000409601 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
MTHFD2-202ENST00000409601 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
MTHFD2-202ENST00000409601 NACADO15069 1562 aa23.69■■□□□ 1.38
MTHFD2-202ENST00000409601 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
MTHFD2-202ENST00000409601 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
MTHFD2-202ENST00000409601 SHROOM4Q9ULL8 1493 aa23.46■■□□□ 1.35
MTHFD2-202ENST00000409601 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
MTHFD2-202ENST00000409601 UNC13AQ9UPW8 1703 aa23.09■■□□□ 1.29
MTHFD2-202ENST00000409601 PABPN1Q86U42 306 aaKnown RBP eCLIP23.05■■□□□ 1.28
MTHFD2-202ENST00000409601 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
MTHFD2-202ENST00000409601 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.2
MTHFD2-202ENST00000409601 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
MTHFD2-202ENST00000409601 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
MTHFD2-202ENST00000409601 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
MTHFD2-202ENST00000409601 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
MTHFD2-202ENST00000409601 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
MTHFD2-202ENST00000409601 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
MTHFD2-202ENST00000409601 WIZO95785 1651 aa22.14■■□□□ 1.13
MTHFD2-202ENST00000409601 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
MTHFD2-202ENST00000409601 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
MTHFD2-202ENST00000409601 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
MTHFD2-202ENST00000409601 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
MTHFD2-202ENST00000409601 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
MTHFD2-202ENST00000409601 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
MTHFD2-202ENST00000409601 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
MTHFD2-202ENST00000409601 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
MTHFD2-202ENST00000409601 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
MTHFD2-202ENST00000409601 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
MTHFD2-202ENST00000409601 NESP48681 1621 aa21.35■■□□□ 1.01
MTHFD2-202ENST00000409601 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
MTHFD2-202ENST00000409601 CFTRP13569 1480 aa21.33■■□□□ 1
MTHFD2-202ENST00000409601 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
MTHFD2-202ENST00000409601 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
MTHFD2-202ENST00000409601 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
MTHFD2-202ENST00000409601 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
MTHFD2-202ENST00000409601 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.96
MTHFD2-202ENST00000409601 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
MTHFD2-202ENST00000409601 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
MTHFD2-202ENST00000409601 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
MTHFD2-202ENST00000409601 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
MTHFD2-202ENST00000409601 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
MTHFD2-202ENST00000409601 ERCC6Q03468 1493 aa20.95■□□□□ 0.95
MTHFD2-202ENST00000409601 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
MTHFD2-202ENST00000409601 CUX1P39880 1505 aa20.93■□□□□ 0.94
MTHFD2-202ENST00000409601 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.93
MTHFD2-202ENST00000409601 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
MTHFD2-202ENST00000409601 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.93
MTHFD2-202ENST00000409601 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
MTHFD2-202ENST00000409601 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
MTHFD2-202ENST00000409601 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
MTHFD2-202ENST00000409601 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
MTHFD2-202ENST00000409601 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
MTHFD2-202ENST00000409601 WDR62O43379 1518 aa20.72■□□□□ 0.91
MTHFD2-202ENST00000409601 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
MTHFD2-202ENST00000409601 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
MTHFD2-202ENST00000409601 FAM9AQ8IZU1 332 aaPredicted RBP20.69■□□□□ 0.9
MTHFD2-202ENST00000409601 SOGA1O94964 1423 aa20.67■□□□□ 0.9
MTHFD2-202ENST00000409601 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.89
MTHFD2-202ENST00000409601 CUX2O14529 1486 aa20.63■□□□□ 0.89
MTHFD2-202ENST00000409601 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
MTHFD2-202ENST00000409601 TARBP1Q13395 1621 aaKnown RBP20.54■□□□□ 0.88
MTHFD2-202ENST00000409601 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
MTHFD2-202ENST00000409601 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
MTHFD2-202ENST00000409601 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
MTHFD2-202ENST00000409601 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
MTHFD2-202ENST00000409601 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
MTHFD2-202ENST00000409601 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.879e-8■■■■■ 30.5
MTHFD2-202ENST00000409601 WDR97A6NE52 1622 aa20.45■□□□□ 0.86
MTHFD2-202ENST00000409601 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
MTHFD2-202ENST00000409601 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
MTHFD2-202ENST00000409601 EEA1Q15075 1411 aa20.41■□□□□ 0.86
MTHFD2-202ENST00000409601 IGF1RP08069 1367 aa20.4■□□□□ 0.86
MTHFD2-202ENST00000409601 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
MTHFD2-202ENST00000409601 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
MTHFD2-202ENST00000409601 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.85
MTHFD2-202ENST00000409601 GRIN2BQ13224 1484 aa20.28■□□□□ 0.84
MTHFD2-202ENST00000409601 CARMIL1Q5VZK9 1371 aa20.27■□□□□ 0.84
MTHFD2-202ENST00000409601 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
MTHFD2-202ENST00000409601 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
MTHFD2-202ENST00000409601 PBRM1Q86U86 1689 aa20.24■□□□□ 0.83
MTHFD2-202ENST00000409601 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
MTHFD2-202ENST00000409601 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
MTHFD2-202ENST00000409601 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
MTHFD2-202ENST00000409601 KIF21BO75037 1637 aa20.17■□□□□ 0.82
MTHFD2-202ENST00000409601 FBLN2P98095 1184 aa20.16■□□□□ 0.82
MTHFD2-202ENST00000409601 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
MTHFD2-202ENST00000409601 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
MTHFD2-202ENST00000409601 ADAMTS12P58397 1594 aa20.15■□□□□ 0.82
MTHFD2-202ENST00000409601 CUL7Q14999 1698 aa20.15■□□□□ 0.82
MTHFD2-202ENST00000409601 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
MTHFD2-202ENST00000409601 CHMP7Q8WUX9 453 aaPredicted RBP20.11■□□□□ 0.81
MTHFD2-202ENST00000409601 SYNJ2O15056 1496 aa20.07■□□□□ 0.8
MTHFD2-202ENST00000409601 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
MTHFD2-202ENST00000409601 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
MTHFD2-202ENST00000409601 GRIN2AQ12879 1464 aa20.04■□□□□ 0.8
MTHFD2-202ENST00000409601 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms