RNA–Protein interactions for RNA: ENST00000619046.4

ATP6AP1-210, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 1 (best) BASIC

Gene ATP6AP1, Length 2,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-210ENST00000619046 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
ATP6AP1-210ENST00000619046 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
ATP6AP1-210ENST00000619046 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
ATP6AP1-210ENST00000619046 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
ATP6AP1-210ENST00000619046 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
ATP6AP1-210ENST00000619046 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
ATP6AP1-210ENST00000619046 DCAF1Q9Y4B6 1507 aa21.26■□□□□ 0.99
ATP6AP1-210ENST00000619046 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
ATP6AP1-210ENST00000619046 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
ATP6AP1-210ENST00000619046 HRCP23327 699 aa20.84■□□□□ 0.93
ATP6AP1-210ENST00000619046 ABCC9O60706 1549 aa20.78■□□□□ 0.92
ATP6AP1-210ENST00000619046 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
ATP6AP1-210ENST00000619046 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
ATP6AP1-210ENST00000619046 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
ATP6AP1-210ENST00000619046 RSF1Q96T23 1441 aaPredicted RBP20.47■□□□□ 0.87
ATP6AP1-210ENST00000619046 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
ATP6AP1-210ENST00000619046 PPARGC1BQ86YN6 1023 aaKnown RBP20.34■□□□□ 0.85
ATP6AP1-210ENST00000619046 TRIM26Q12899 539 aaPredicted RBP20.22■□□□□ 0.83
ATP6AP1-210ENST00000619046 NACADO15069 1562 aa20.17■□□□□ 0.82
ATP6AP1-210ENST00000619046 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
ATP6AP1-210ENST00000619046 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
ATP6AP1-210ENST00000619046 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
ATP6AP1-210ENST00000619046 WIZO95785 1651 aa20.01■□□□□ 0.79
ATP6AP1-210ENST00000619046 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
ATP6AP1-210ENST00000619046 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
ATP6AP1-210ENST00000619046 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
ATP6AP1-210ENST00000619046 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
ATP6AP1-210ENST00000619046 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
ATP6AP1-210ENST00000619046 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
ATP6AP1-210ENST00000619046 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
ATP6AP1-210ENST00000619046 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
ATP6AP1-210ENST00000619046 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
ATP6AP1-210ENST00000619046 ABCC8Q09428 1581 aa19.59■□□□□ 0.73
ATP6AP1-210ENST00000619046 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
ATP6AP1-210ENST00000619046 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
ATP6AP1-210ENST00000619046 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
ATP6AP1-210ENST00000619046 SOGA1O94964 1423 aa19.39■□□□□ 0.69
ATP6AP1-210ENST00000619046 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
ATP6AP1-210ENST00000619046 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
ATP6AP1-210ENST00000619046 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
ATP6AP1-210ENST00000619046 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
ATP6AP1-210ENST00000619046 EEA1Q15075 1411 aa19.33■□□□□ 0.69
ATP6AP1-210ENST00000619046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.69
ATP6AP1-210ENST00000619046 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
ATP6AP1-210ENST00000619046 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
ATP6AP1-210ENST00000619046 CCER1Q8TC90 406 aaPredicted RBP19.23■□□□□ 0.67
ATP6AP1-210ENST00000619046 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
ATP6AP1-210ENST00000619046 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
ATP6AP1-210ENST00000619046 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
ATP6AP1-210ENST00000619046 KIF21BO75037 1637 aa19.17■□□□□ 0.66
ATP6AP1-210ENST00000619046 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
ATP6AP1-210ENST00000619046 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
ATP6AP1-210ENST00000619046 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
ATP6AP1-210ENST00000619046 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
ATP6AP1-210ENST00000619046 ACIN1Q9UKV3 1341 aaKnown RBP19.04■□□□□ 0.64
ATP6AP1-210ENST00000619046 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
ATP6AP1-210ENST00000619046 DIEXFQ68CQ4 756 aaKnown RBP19.02■□□□□ 0.64
ATP6AP1-210ENST00000619046 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
ATP6AP1-210ENST00000619046 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
ATP6AP1-210ENST00000619046 CLIP1P30622 1438 aa18.95■□□□□ 0.62
ATP6AP1-210ENST00000619046 VPS8Q8N3P4 1428 aa18.94■□□□□ 0.62
ATP6AP1-210ENST00000619046 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
ATP6AP1-210ENST00000619046 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
ATP6AP1-210ENST00000619046 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
ATP6AP1-210ENST00000619046 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
ATP6AP1-210ENST00000619046 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
ATP6AP1-210ENST00000619046 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
ATP6AP1-210ENST00000619046 CENPBP07199 599 aaPredicted RBP18.79■□□□□ 0.6
ATP6AP1-210ENST00000619046 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
ATP6AP1-210ENST00000619046 PRXQ9BXM0 1461 aa18.77■□□□□ 0.6
ATP6AP1-210ENST00000619046 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
ATP6AP1-210ENST00000619046 ARAP1Q96P48 1450 aa18.74■□□□□ 0.59
ATP6AP1-210ENST00000619046 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
ATP6AP1-210ENST00000619046 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
ATP6AP1-210ENST00000619046 CUX1P39880 1505 aa18.69■□□□□ 0.58
ATP6AP1-210ENST00000619046 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
ATP6AP1-210ENST00000619046 MIER1Q8N108 512 aa18.63■□□□□ 0.57
ATP6AP1-210ENST00000619046 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
ATP6AP1-210ENST00000619046 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
ATP6AP1-210ENST00000619046 APLP2Q06481 763 aa18.59■□□□□ 0.57
ATP6AP1-210ENST00000619046 RRBP1Q9P2E9 1410 aaKnown RBP18.58■□□□□ 0.56
ATP6AP1-210ENST00000619046 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
ATP6AP1-210ENST00000619046 CUX2O14529 1486 aa18.56■□□□□ 0.56
ATP6AP1-210ENST00000619046 CFTRP13569 1480 aa18.55■□□□□ 0.56
ATP6AP1-210ENST00000619046 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
ATP6AP1-210ENST00000619046 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
ATP6AP1-210ENST00000619046 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
ATP6AP1-210ENST00000619046 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.56
ATP6AP1-210ENST00000619046 YTHDC1Q96MU7 727 aaKnown RBP18.5■□□□□ 0.55
ATP6AP1-210ENST00000619046 CCNB3Q8WWL7 1395 aa18.39■□□□□ 0.53
ATP6AP1-210ENST00000619046 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
ATP6AP1-210ENST00000619046 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
ATP6AP1-210ENST00000619046 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
ATP6AP1-210ENST00000619046 IGF1RP08069 1367 aa18.34■□□□□ 0.53
ATP6AP1-210ENST00000619046 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
ATP6AP1-210ENST00000619046 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
ATP6AP1-210ENST00000619046 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
ATP6AP1-210ENST00000619046 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
ATP6AP1-210ENST00000619046 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
ATP6AP1-210ENST00000619046 PCF11O94913 1555 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms