RNA–Protein interactions for RNA: ENST00000489041.1

MTHFD2-208, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 2

Gene MTHFD2, Length 1,135 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-208ENST00000489041 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
MTHFD2-208ENST00000489041 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
MTHFD2-208ENST00000489041 NISCHQ9Y2I1 1504 aa20.52■□□□□ 0.87
MTHFD2-208ENST00000489041 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
MTHFD2-208ENST00000489041 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
MTHFD2-208ENST00000489041 ABCC9O60706 1549 aa18.59■□□□□ 0.57
MTHFD2-208ENST00000489041 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
MTHFD2-208ENST00000489041 FOXD1Q16676 465 aa18.1■□□□□ 0.49
MTHFD2-208ENST00000489041 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
MTHFD2-208ENST00000489041 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
MTHFD2-208ENST00000489041 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
MTHFD2-208ENST00000489041 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
MTHFD2-208ENST00000489041 NACADO15069 1562 aa17.48■□□□□ 0.39
MTHFD2-208ENST00000489041 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
MTHFD2-208ENST00000489041 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.34
MTHFD2-208ENST00000489041 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
MTHFD2-208ENST00000489041 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
MTHFD2-208ENST00000489041 ADRA2BP18089 450 aa17.09■□□□□ 0.33
MTHFD2-208ENST00000489041 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
MTHFD2-208ENST00000489041 ZCCHC6Q5VYS8 1495 aaKnown RBP16.94■□□□□ 0.3
MTHFD2-208ENST00000489041 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
MTHFD2-208ENST00000489041 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
MTHFD2-208ENST00000489041 SHROOM4Q9ULL8 1493 aa16.87■□□□□ 0.29
MTHFD2-208ENST00000489041 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
MTHFD2-208ENST00000489041 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
MTHFD2-208ENST00000489041 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
MTHFD2-208ENST00000489041 MSH5O43196 834 aa16.7■□□□□ 0.26
MTHFD2-208ENST00000489041 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
MTHFD2-208ENST00000489041 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
MTHFD2-208ENST00000489041 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
MTHFD2-208ENST00000489041 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
MTHFD2-208ENST00000489041 CUX2O14529 1486 aa16.07■□□□□ 0.16
MTHFD2-208ENST00000489041 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
MTHFD2-208ENST00000489041 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
MTHFD2-208ENST00000489041 SMARCA2P51531 1590 aa16.02■□□□□ 0.16
MTHFD2-208ENST00000489041 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
MTHFD2-208ENST00000489041 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
MTHFD2-208ENST00000489041 NESP48681 1621 aa15.93■□□□□ 0.14
MTHFD2-208ENST00000489041 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
MTHFD2-208ENST00000489041 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
MTHFD2-208ENST00000489041 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
MTHFD2-208ENST00000489041 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
MTHFD2-208ENST00000489041 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
MTHFD2-208ENST00000489041 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
MTHFD2-208ENST00000489041 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.11
MTHFD2-208ENST00000489041 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
MTHFD2-208ENST00000489041 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
MTHFD2-208ENST00000489041 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
MTHFD2-208ENST00000489041 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
MTHFD2-208ENST00000489041 WIZO95785 1651 aa15.57■□□□□ 0.08
MTHFD2-208ENST00000489041 TRIM41Q8WV44 630 aa15.52■□□□□ 0.08
MTHFD2-208ENST00000489041 WDR62O43379 1518 aa15.52■□□□□ 0.07
MTHFD2-208ENST00000489041 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
MTHFD2-208ENST00000489041 FANCD2Q9BXW9 1451 aa15.48■□□□□ 0.07
MTHFD2-208ENST00000489041 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
MTHFD2-208ENST00000489041 CFTRP13569 1480 aa15.46■□□□□ 0.07
MTHFD2-208ENST00000489041 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
MTHFD2-208ENST00000489041 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
MTHFD2-208ENST00000489041 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
MTHFD2-208ENST00000489041 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
MTHFD2-208ENST00000489041 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
MTHFD2-208ENST00000489041 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
MTHFD2-208ENST00000489041 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
MTHFD2-208ENST00000489041 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
MTHFD2-208ENST00000489041 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
MTHFD2-208ENST00000489041 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
MTHFD2-208ENST00000489041 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
MTHFD2-208ENST00000489041 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
MTHFD2-208ENST00000489041 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
MTHFD2-208ENST00000489041 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
MTHFD2-208ENST00000489041 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
MTHFD2-208ENST00000489041 CYB5RLQ6IPT4 315 aa15.07■□□□□ 0
MTHFD2-208ENST00000489041 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 09e-8■■■■■ 30.5
MTHFD2-208ENST00000489041 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
MTHFD2-208ENST00000489041 ARHGEF11O15085 1522 aa15.06■□□□□ 0
MTHFD2-208ENST00000489041 FBLN2P98095 1184 aa15.05■□□□□ -0
MTHFD2-208ENST00000489041 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
MTHFD2-208ENST00000489041 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
MTHFD2-208ENST00000489041 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
MTHFD2-208ENST00000489041 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
MTHFD2-208ENST00000489041 SOGA1O94964 1423 aa14.99□□□□□ -0.01
MTHFD2-208ENST00000489041 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
MTHFD2-208ENST00000489041 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
MTHFD2-208ENST00000489041 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
MTHFD2-208ENST00000489041 HOXD11P31277 338 aaPredicted RBP14.94□□□□□ -0.02
MTHFD2-208ENST00000489041 CHMP7Q8WUX9 453 aaPredicted RBP14.93□□□□□ -0.02
MTHFD2-208ENST00000489041 CHD1O14646 1710 aa14.92□□□□□ -0.02
MTHFD2-208ENST00000489041 ARAP1Q96P48 1450 aa14.89□□□□□ -0.03
MTHFD2-208ENST00000489041 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
MTHFD2-208ENST00000489041 SNAPC4Q5SXM2 1469 aa14.86□□□□□ -0.03
MTHFD2-208ENST00000489041 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
MTHFD2-208ENST00000489041 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
MTHFD2-208ENST00000489041 CUX1P39880 1505 aa14.84□□□□□ -0.03
MTHFD2-208ENST00000489041 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
MTHFD2-208ENST00000489041 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.03
MTHFD2-208ENST00000489041 SYNJ2O15056 1496 aa14.79□□□□□ -0.04
MTHFD2-208ENST00000489041 SYNJ1O43426 1573 aa14.79□□□□□ -0.04
MTHFD2-208ENST00000489041 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
MTHFD2-208ENST00000489041 GAPVD1Q14C86 1478 aa14.77□□□□□ -0.04
MTHFD2-208ENST00000489041 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms