RNA–Protein interactions for RNA: ENST00000323851.11

NDRG1-201, Transcript of N-myc downstream regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDRG1, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-201ENST00000323851 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
NDRG1-201ENST00000323851 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.86
NDRG1-201ENST00000323851 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
NDRG1-201ENST00000323851 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
NDRG1-201ENST00000323851 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
NDRG1-201ENST00000323851 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
NDRG1-201ENST00000323851 SUPT5HO00267 1087 aaKnown RBP19.37■□□□□ 0.69
NDRG1-201ENST00000323851 ABCC9O60706 1549 aa19.27■□□□□ 0.68
NDRG1-201ENST00000323851 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
NDRG1-201ENST00000323851 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
NDRG1-201ENST00000323851 NACADO15069 1562 aa18.96■□□□□ 0.63
NDRG1-201ENST00000323851 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
NDRG1-201ENST00000323851 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
NDRG1-201ENST00000323851 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
NDRG1-201ENST00000323851 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
NDRG1-201ENST00000323851 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
NDRG1-201ENST00000323851 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
NDRG1-201ENST00000323851 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
NDRG1-201ENST00000323851 MYT1Q01538 1121 aa18.43■□□□□ 0.54
NDRG1-201ENST00000323851 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.537e-17■□□□□ 9
NDRG1-201ENST00000323851 WIZO95785 1651 aa18.32■□□□□ 0.52
NDRG1-201ENST00000323851 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
NDRG1-201ENST00000323851 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
NDRG1-201ENST00000323851 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
NDRG1-201ENST00000323851 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
NDRG1-201ENST00000323851 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
NDRG1-201ENST00000323851 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
NDRG1-201ENST00000323851 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
NDRG1-201ENST00000323851 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
NDRG1-201ENST00000323851 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
NDRG1-201ENST00000323851 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
NDRG1-201ENST00000323851 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
NDRG1-201ENST00000323851 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
NDRG1-201ENST00000323851 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
NDRG1-201ENST00000323851 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
NDRG1-201ENST00000323851 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
NDRG1-201ENST00000323851 HRCP23327 699 aa17.68■□□□□ 0.42
NDRG1-201ENST00000323851 TTBK1Q5TCY1 1321 aaPredicted RBP17.68■□□□□ 0.42
NDRG1-201ENST00000323851 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
NDRG1-201ENST00000323851 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
NDRG1-201ENST00000323851 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.39
NDRG1-201ENST00000323851 SOGA1O94964 1423 aa17.5■□□□□ 0.39
NDRG1-201ENST00000323851 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
NDRG1-201ENST00000323851 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
NDRG1-201ENST00000323851 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
NDRG1-201ENST00000323851 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
NDRG1-201ENST00000323851 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
NDRG1-201ENST00000323851 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
NDRG1-201ENST00000323851 EEA1Q15075 1411 aa17.34■□□□□ 0.37
NDRG1-201ENST00000323851 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
NDRG1-201ENST00000323851 PRKCSHP14314 528 aaPredicted RBP17.31■□□□□ 0.36
NDRG1-201ENST00000323851 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
NDRG1-201ENST00000323851 CFTRP13569 1480 aa17.28■□□□□ 0.36
NDRG1-201ENST00000323851 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.35
NDRG1-201ENST00000323851 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
NDRG1-201ENST00000323851 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
NDRG1-201ENST00000323851 TNIKQ9UKE5 1360 aa17.22■□□□□ 0.35
NDRG1-201ENST00000323851 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
NDRG1-201ENST00000323851 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
NDRG1-201ENST00000323851 CUX1P39880 1505 aa17.19■□□□□ 0.34
NDRG1-201ENST00000323851 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
NDRG1-201ENST00000323851 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
NDRG1-201ENST00000323851 KIF21BO75037 1637 aa17.12■□□□□ 0.33
NDRG1-201ENST00000323851 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
NDRG1-201ENST00000323851 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
NDRG1-201ENST00000323851 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
NDRG1-201ENST00000323851 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
NDRG1-201ENST00000323851 NESP48681 1621 aa17.03■□□□□ 0.32
NDRG1-201ENST00000323851 KIF27Q86VH2 1401 aa17.02■□□□□ 0.32
NDRG1-201ENST00000323851 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.31
NDRG1-201ENST00000323851 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.31
NDRG1-201ENST00000323851 CLIP1P30622 1438 aa17.01■□□□□ 0.31
NDRG1-201ENST00000323851 PRXQ9BXM0 1461 aa16.97■□□□□ 0.31
NDRG1-201ENST00000323851 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
NDRG1-201ENST00000323851 CUX2O14529 1486 aa16.96■□□□□ 0.3
NDRG1-201ENST00000323851 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
NDRG1-201ENST00000323851 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
NDRG1-201ENST00000323851 IGF1RP08069 1367 aa16.86■□□□□ 0.29
NDRG1-201ENST00000323851 APLP2Q06481 763 aa16.86■□□□□ 0.29
NDRG1-201ENST00000323851 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
NDRG1-201ENST00000323851 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
NDRG1-201ENST00000323851 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
NDRG1-201ENST00000323851 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
NDRG1-201ENST00000323851 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
NDRG1-201ENST00000323851 POLA1P09884 1462 aaPredicted RBP16.82■□□□□ 0.28
NDRG1-201ENST00000323851 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
NDRG1-201ENST00000323851 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
NDRG1-201ENST00000323851 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
NDRG1-201ENST00000323851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.27
NDRG1-201ENST00000323851 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.27
NDRG1-201ENST00000323851 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
NDRG1-201ENST00000323851 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
NDRG1-201ENST00000323851 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
NDRG1-201ENST00000323851 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
NDRG1-201ENST00000323851 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
NDRG1-201ENST00000323851 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
NDRG1-201ENST00000323851 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.26
NDRG1-201ENST00000323851 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
NDRG1-201ENST00000323851 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
NDRG1-201ENST00000323851 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms